Experiment: acetate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02696 and MPMX20_02697 are separated by 96 nucleotides MPMX20_02697 and MPMX20_02698 are separated by 61 nucleotides
MPMX20_02696: MPMX20_02696 - Murein tetrapeptide carboxypeptidase, at 2,849,116 to 2,850,030
_02696
MPMX20_02697: MPMX20_02697 - K(+)/H(+) antiporter NhaP2, at 2,850,127 to 2,851,860
_02697
MPMX20_02698: MPMX20_02698 - Alanine racemase, catabolic, at 2,851,922 to 2,852,992
_02698
Position (kb)
2850
2851
2852 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2849.145 kb on + strand at 2849.171 kb on - strand at 2849.301 kb on + strand, within MPMX20_02696 at 2849.340 kb on + strand, within MPMX20_02696 at 2849.357 kb on + strand, within MPMX20_02696 at 2849.365 kb on - strand, within MPMX20_02696 at 2849.377 kb on - strand, within MPMX20_02696 at 2849.384 kb on + strand, within MPMX20_02696 at 2849.384 kb on + strand, within MPMX20_02696 at 2849.392 kb on - strand, within MPMX20_02696 at 2849.458 kb on - strand, within MPMX20_02696 at 2849.492 kb on + strand, within MPMX20_02696 at 2849.500 kb on - strand, within MPMX20_02696 at 2849.500 kb on - strand, within MPMX20_02696 at 2849.500 kb on - strand, within MPMX20_02696 at 2849.666 kb on + strand, within MPMX20_02696 at 2849.688 kb on + strand, within MPMX20_02696 at 2849.728 kb on + strand, within MPMX20_02696 at 2849.741 kb on - strand, within MPMX20_02696 at 2849.768 kb on - strand, within MPMX20_02696 at 2849.936 kb on + strand, within MPMX20_02696 at 2849.942 kb on + strand at 2849.954 kb on + strand at 2850.005 kb on + strand at 2850.059 kb on + strand at 2850.114 kb on + strand at 2850.114 kb on + strand at 2850.116 kb on - strand at 2850.122 kb on - strand at 2850.122 kb on - strand at 2850.122 kb on - strand at 2850.122 kb on - strand at 2850.122 kb on - strand at 2850.139 kb on + strand at 2850.147 kb on - strand at 2850.164 kb on + strand at 2850.164 kb on + strand at 2850.164 kb on + strand at 2850.180 kb on - strand at 2850.316 kb on + strand, within MPMX20_02697 at 2850.318 kb on + strand, within MPMX20_02697 at 2850.326 kb on - strand, within MPMX20_02697 at 2850.326 kb on - strand, within MPMX20_02697 at 2850.373 kb on + strand, within MPMX20_02697 at 2850.373 kb on + strand, within MPMX20_02697 at 2850.377 kb on - strand, within MPMX20_02697 at 2850.388 kb on + strand, within MPMX20_02697 at 2850.434 kb on + strand, within MPMX20_02697 at 2850.434 kb on + strand, within MPMX20_02697 at 2850.506 kb on - strand, within MPMX20_02697 at 2850.567 kb on - strand, within MPMX20_02697 at 2850.650 kb on - strand, within MPMX20_02697 at 2850.668 kb on - strand, within MPMX20_02697 at 2850.668 kb on - strand, within MPMX20_02697 at 2850.678 kb on - strand, within MPMX20_02697 at 2850.789 kb on + strand, within MPMX20_02697 at 2850.797 kb on - strand, within MPMX20_02697 at 2850.797 kb on - strand, within MPMX20_02697 at 2850.797 kb on - strand, within MPMX20_02697 at 2850.797 kb on - strand, within MPMX20_02697 at 2850.869 kb on + strand, within MPMX20_02697 at 2850.916 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.948 kb on + strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.956 kb on - strand, within MPMX20_02697 at 2850.974 kb on + strand, within MPMX20_02697 at 2850.974 kb on + strand, within MPMX20_02697 at 2851.001 kb on + strand, within MPMX20_02697 at 2851.014 kb on + strand, within MPMX20_02697 at 2851.030 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.106 kb on + strand, within MPMX20_02697 at 2851.114 kb on - strand, within MPMX20_02697 at 2851.114 kb on - strand, within MPMX20_02697 at 2851.114 kb on - strand, within MPMX20_02697 at 2851.144 kb on + strand, within MPMX20_02697 at 2851.203 kb on - strand, within MPMX20_02697 at 2851.394 kb on - strand, within MPMX20_02697 at 2851.499 kb on + strand, within MPMX20_02697 at 2851.499 kb on + strand, within MPMX20_02697 at 2851.599 kb on + strand, within MPMX20_02697 at 2851.662 kb on + strand, within MPMX20_02697 at 2851.682 kb on + strand, within MPMX20_02697 at 2851.689 kb on - strand at 2851.742 kb on - strand at 2851.790 kb on - strand at 2851.829 kb on + strand at 2851.892 kb on + strand at 2851.964 kb on - strand at 2851.966 kb on + strand at 2852.046 kb on + strand, within MPMX20_02698 at 2852.232 kb on + strand, within MPMX20_02698 at 2852.247 kb on + strand, within MPMX20_02698 at 2852.335 kb on + strand, within MPMX20_02698 at 2852.343 kb on - strand, within MPMX20_02698 at 2852.449 kb on - strand, within MPMX20_02698 at 2852.566 kb on + strand, within MPMX20_02698 at 2852.568 kb on - strand, within MPMX20_02698 at 2852.568 kb on - strand, within MPMX20_02698 at 2852.597 kb on - strand, within MPMX20_02698 at 2852.671 kb on - strand, within MPMX20_02698 at 2852.678 kb on - strand, within MPMX20_02698 at 2852.678 kb on - strand, within MPMX20_02698 at 2852.711 kb on + strand, within MPMX20_02698 at 2852.714 kb on - strand, within MPMX20_02698 at 2852.752 kb on - strand, within MPMX20_02698
Per-strain Table
Position Strand Gene LocusTag Fraction acetate (C) remove 2,849,145 + -1.9 2,849,171 - -1.6 2,849,301 + MPMX20_02696 0.20 -1.7 2,849,340 + MPMX20_02696 0.24 -0.4 2,849,357 + MPMX20_02696 0.26 -3.2 2,849,365 - MPMX20_02696 0.27 -1.5 2,849,377 - MPMX20_02696 0.29 -1.8 2,849,384 + MPMX20_02696 0.29 -3.1 2,849,384 + MPMX20_02696 0.29 -1.2 2,849,392 - MPMX20_02696 0.30 +0.0 2,849,458 - MPMX20_02696 0.37 -3.5 2,849,492 + MPMX20_02696 0.41 -1.4 2,849,500 - MPMX20_02696 0.42 -2.8 2,849,500 - MPMX20_02696 0.42 -1.0 2,849,500 - MPMX20_02696 0.42 -1.7 2,849,666 + MPMX20_02696 0.60 -4.1 2,849,688 + MPMX20_02696 0.63 -1.4 2,849,728 + MPMX20_02696 0.67 -1.1 2,849,741 - MPMX20_02696 0.68 -0.3 2,849,768 - MPMX20_02696 0.71 -2.4 2,849,936 + MPMX20_02696 0.90 -2.3 2,849,942 + -2.1 2,849,954 + -2.7 2,850,005 + +0.7 2,850,059 + -0.6 2,850,114 + -0.5 2,850,114 + -0.6 2,850,116 - +1.9 2,850,122 - +1.3 2,850,122 - +0.9 2,850,122 - +1.6 2,850,122 - -0.7 2,850,122 - +0.8 2,850,139 + +2.5 2,850,147 - +2.5 2,850,164 + +3.5 2,850,164 + +1.3 2,850,164 + +0.4 2,850,180 - +2.6 2,850,316 + MPMX20_02697 0.11 +1.4 2,850,318 + MPMX20_02697 0.11 +1.2 2,850,326 - MPMX20_02697 0.11 +1.2 2,850,326 - MPMX20_02697 0.11 +3.7 2,850,373 + MPMX20_02697 0.14 +1.4 2,850,373 + MPMX20_02697 0.14 +1.8 2,850,377 - MPMX20_02697 0.14 +2.1 2,850,388 + MPMX20_02697 0.15 +2.6 2,850,434 + MPMX20_02697 0.18 +1.6 2,850,434 + MPMX20_02697 0.18 -0.2 2,850,506 - MPMX20_02697 0.22 +1.1 2,850,567 - MPMX20_02697 0.25 +3.1 2,850,650 - MPMX20_02697 0.30 +1.6 2,850,668 - MPMX20_02697 0.31 +2.5 2,850,668 - MPMX20_02697 0.31 +1.3 2,850,678 - MPMX20_02697 0.32 +0.6 2,850,789 + MPMX20_02697 0.38 +2.2 2,850,797 - MPMX20_02697 0.39 +4.4 2,850,797 - MPMX20_02697 0.39 +1.5 2,850,797 - MPMX20_02697 0.39 +0.9 2,850,797 - MPMX20_02697 0.39 +1.4 2,850,869 + MPMX20_02697 0.43 +1.7 2,850,916 + MPMX20_02697 0.46 +2.0 2,850,948 + MPMX20_02697 0.47 +1.8 2,850,948 + MPMX20_02697 0.47 +2.6 2,850,948 + MPMX20_02697 0.47 +2.2 2,850,948 + MPMX20_02697 0.47 +2.3 2,850,956 - MPMX20_02697 0.48 +0.2 2,850,956 - MPMX20_02697 0.48 +1.4 2,850,956 - MPMX20_02697 0.48 +3.0 2,850,956 - MPMX20_02697 0.48 +0.9 2,850,956 - MPMX20_02697 0.48 +2.3 2,850,974 + MPMX20_02697 0.49 +1.7 2,850,974 + MPMX20_02697 0.49 +2.7 2,851,001 + MPMX20_02697 0.50 +0.6 2,851,014 + MPMX20_02697 0.51 +1.6 2,851,030 + MPMX20_02697 0.52 +1.8 2,851,106 + MPMX20_02697 0.56 +2.9 2,851,106 + MPMX20_02697 0.56 +2.6 2,851,106 + MPMX20_02697 0.56 +2.2 2,851,106 + MPMX20_02697 0.56 +2.4 2,851,106 + MPMX20_02697 0.56 +2.0 2,851,106 + MPMX20_02697 0.56 +1.8 2,851,114 - MPMX20_02697 0.57 +2.2 2,851,114 - MPMX20_02697 0.57 +2.4 2,851,114 - MPMX20_02697 0.57 +0.4 2,851,144 + MPMX20_02697 0.59 +2.6 2,851,203 - MPMX20_02697 0.62 +1.2 2,851,394 - MPMX20_02697 0.73 +0.3 2,851,499 + MPMX20_02697 0.79 +3.4 2,851,499 + MPMX20_02697 0.79 +1.7 2,851,599 + MPMX20_02697 0.85 +0.5 2,851,662 + MPMX20_02697 0.89 +2.0 2,851,682 + MPMX20_02697 0.90 +2.0 2,851,689 - +2.0 2,851,742 - +1.6 2,851,790 - +2.0 2,851,829 + -0.5 2,851,892 + +0.1 2,851,964 - +1.1 2,851,966 + +0.5 2,852,046 + MPMX20_02698 0.12 -1.4 2,852,232 + MPMX20_02698 0.29 +0.1 2,852,247 + MPMX20_02698 0.30 +0.2 2,852,335 + MPMX20_02698 0.39 -0.2 2,852,343 - MPMX20_02698 0.39 +2.8 2,852,449 - MPMX20_02698 0.49 +0.6 2,852,566 + MPMX20_02698 0.60 +1.0 2,852,568 - MPMX20_02698 0.60 -0.1 2,852,568 - MPMX20_02698 0.60 +1.7 2,852,597 - MPMX20_02698 0.63 +0.9 2,852,671 - MPMX20_02698 0.70 +0.5 2,852,678 - MPMX20_02698 0.71 +2.0 2,852,678 - MPMX20_02698 0.71 +1.6 2,852,711 + MPMX20_02698 0.74 +2.6 2,852,714 - MPMX20_02698 0.74 +0.6 2,852,752 - MPMX20_02698 0.77 +0.5
Or see this region's nucleotide sequence