Experiment: D-Glucose-6-Phosphate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04415 and MPMX20_04416 overlap by 19 nucleotides MPMX20_04416 and MPMX20_04417 are separated by 6 nucleotides
MPMX20_04415: MPMX20_04415 - Cellulose synthase operon protein C, at 4,611,034 to 4,614,516
_04415
MPMX20_04416: MPMX20_04416 - Endoglucanase, at 4,614,498 to 4,615,604
_04416
MPMX20_04417: MPMX20_04417 - Cyclic di-GMP-binding protein, at 4,615,611 to 4,617,995
_04417
Position (kb)
4614
4615
4616 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4613.499 kb on + strand, within MPMX20_04415 at 4613.573 kb on + strand, within MPMX20_04415 at 4613.581 kb on - strand, within MPMX20_04415 at 4613.581 kb on - strand, within MPMX20_04415 at 4613.581 kb on - strand, within MPMX20_04415 at 4613.624 kb on - strand, within MPMX20_04415 at 4613.624 kb on - strand, within MPMX20_04415 at 4613.652 kb on + strand, within MPMX20_04415 at 4613.842 kb on - strand, within MPMX20_04415 at 4613.844 kb on + strand, within MPMX20_04415 at 4613.941 kb on - strand, within MPMX20_04415 at 4613.949 kb on + strand, within MPMX20_04415 at 4613.968 kb on - strand, within MPMX20_04415 at 4614.017 kb on - strand, within MPMX20_04415 at 4614.140 kb on + strand, within MPMX20_04415 at 4614.140 kb on + strand, within MPMX20_04415 at 4614.157 kb on + strand, within MPMX20_04415 at 4614.157 kb on + strand, within MPMX20_04415 at 4614.217 kb on + strand at 4614.285 kb on - strand at 4614.348 kb on + strand at 4614.356 kb on - strand at 4614.356 kb on - strand at 4614.388 kb on - strand at 4614.421 kb on - strand at 4614.457 kb on - strand at 4614.468 kb on + strand at 4614.468 kb on + strand at 4614.469 kb on + strand at 4614.476 kb on - strand at 4614.476 kb on - strand at 4614.476 kb on - strand at 4614.480 kb on + strand at 4614.488 kb on - strand at 4614.488 kb on - strand at 4614.495 kb on + strand at 4614.550 kb on + strand at 4614.594 kb on + strand at 4614.599 kb on + strand at 4614.599 kb on + strand at 4614.761 kb on + strand, within MPMX20_04416 at 4614.804 kb on - strand, within MPMX20_04416 at 4614.804 kb on - strand, within MPMX20_04416 at 4614.896 kb on + strand, within MPMX20_04416 at 4615.062 kb on - strand, within MPMX20_04416 at 4615.126 kb on - strand, within MPMX20_04416 at 4615.126 kb on - strand, within MPMX20_04416 at 4615.146 kb on - strand, within MPMX20_04416 at 4615.230 kb on - strand, within MPMX20_04416 at 4615.379 kb on - strand, within MPMX20_04416 at 4615.391 kb on - strand, within MPMX20_04416 at 4615.424 kb on + strand, within MPMX20_04416 at 4615.432 kb on - strand, within MPMX20_04416 at 4615.439 kb on - strand, within MPMX20_04416 at 4615.517 kb on + strand at 4615.536 kb on - strand at 4615.574 kb on - strand at 4615.574 kb on - strand at 4615.730 kb on + strand at 4615.745 kb on - strand at 4615.763 kb on + strand at 4615.795 kb on - strand at 4615.875 kb on + strand, within MPMX20_04417 at 4615.888 kb on - strand, within MPMX20_04417 at 4615.888 kb on - strand, within MPMX20_04417 at 4615.913 kb on + strand, within MPMX20_04417 at 4615.913 kb on + strand, within MPMX20_04417 at 4615.918 kb on + strand, within MPMX20_04417 at 4615.926 kb on - strand, within MPMX20_04417 at 4615.973 kb on + strand, within MPMX20_04417 at 4616.001 kb on + strand, within MPMX20_04417 at 4616.065 kb on + strand, within MPMX20_04417 at 4616.073 kb on - strand, within MPMX20_04417 at 4616.073 kb on - strand, within MPMX20_04417 at 4616.073 kb on - strand, within MPMX20_04417 at 4616.080 kb on + strand, within MPMX20_04417 at 4616.080 kb on + strand, within MPMX20_04417 at 4616.088 kb on - strand, within MPMX20_04417 at 4616.088 kb on - strand, within MPMX20_04417 at 4616.098 kb on - strand, within MPMX20_04417 at 4616.118 kb on - strand, within MPMX20_04417 at 4616.134 kb on - strand, within MPMX20_04417 at 4616.251 kb on + strand, within MPMX20_04417 at 4616.259 kb on - strand, within MPMX20_04417 at 4616.259 kb on - strand, within MPMX20_04417 at 4616.319 kb on + strand, within MPMX20_04417 at 4616.382 kb on - strand, within MPMX20_04417 at 4616.399 kb on - strand, within MPMX20_04417 at 4616.432 kb on - strand, within MPMX20_04417 at 4616.432 kb on - strand, within MPMX20_04417 at 4616.441 kb on + strand, within MPMX20_04417 at 4616.443 kb on - strand, within MPMX20_04417 at 4616.451 kb on - strand, within MPMX20_04417 at 4616.459 kb on - strand, within MPMX20_04417 at 4616.586 kb on + strand, within MPMX20_04417
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C) remove 4,613,499 + MPMX20_04415 0.71 +0.2 4,613,573 + MPMX20_04415 0.73 +1.4 4,613,581 - MPMX20_04415 0.73 +0.9 4,613,581 - MPMX20_04415 0.73 -0.4 4,613,581 - MPMX20_04415 0.73 +0.6 4,613,624 - MPMX20_04415 0.74 -1.3 4,613,624 - MPMX20_04415 0.74 -0.2 4,613,652 + MPMX20_04415 0.75 +1.1 4,613,842 - MPMX20_04415 0.81 +0.2 4,613,844 + MPMX20_04415 0.81 -0.1 4,613,941 - MPMX20_04415 0.83 -1.3 4,613,949 + MPMX20_04415 0.84 -0.2 4,613,968 - MPMX20_04415 0.84 +0.9 4,614,017 - MPMX20_04415 0.86 +0.2 4,614,140 + MPMX20_04415 0.89 -0.9 4,614,140 + MPMX20_04415 0.89 -0.6 4,614,157 + MPMX20_04415 0.90 +0.2 4,614,157 + MPMX20_04415 0.90 -1.1 4,614,217 + +0.4 4,614,285 - +1.7 4,614,348 + -0.2 4,614,356 - +0.2 4,614,356 - +0.9 4,614,388 - +0.4 4,614,421 - +1.3 4,614,457 - -0.1 4,614,468 + +0.6 4,614,468 + -0.0 4,614,469 + +0.4 4,614,476 - +0.2 4,614,476 - +0.2 4,614,476 - +1.1 4,614,480 + +0.6 4,614,488 - +1.3 4,614,488 - +1.7 4,614,495 + -1.3 4,614,550 + +1.1 4,614,594 + -0.2 4,614,599 + +0.7 4,614,599 + -0.3 4,614,761 + MPMX20_04416 0.24 -0.4 4,614,804 - MPMX20_04416 0.28 -2.0 4,614,804 - MPMX20_04416 0.28 +0.1 4,614,896 + MPMX20_04416 0.36 -0.7 4,615,062 - MPMX20_04416 0.51 +0.4 4,615,126 - MPMX20_04416 0.57 +0.5 4,615,126 - MPMX20_04416 0.57 +0.3 4,615,146 - MPMX20_04416 0.59 +0.3 4,615,230 - MPMX20_04416 0.66 +1.8 4,615,379 - MPMX20_04416 0.80 -0.1 4,615,391 - MPMX20_04416 0.81 -3.4 4,615,424 + MPMX20_04416 0.84 -0.8 4,615,432 - MPMX20_04416 0.84 -0.4 4,615,439 - MPMX20_04416 0.85 +2.1 4,615,517 + -0.3 4,615,536 - +0.5 4,615,574 - +0.4 4,615,574 - +0.4 4,615,730 + -1.1 4,615,745 - -0.4 4,615,763 + -0.9 4,615,795 - -1.2 4,615,875 + MPMX20_04417 0.11 +0.8 4,615,888 - MPMX20_04417 0.12 +0.8 4,615,888 - MPMX20_04417 0.12 +0.3 4,615,913 + MPMX20_04417 0.13 +1.6 4,615,913 + MPMX20_04417 0.13 -1.6 4,615,918 + MPMX20_04417 0.13 -0.1 4,615,926 - MPMX20_04417 0.13 +1.6 4,615,973 + MPMX20_04417 0.15 -0.8 4,616,001 + MPMX20_04417 0.16 +0.3 4,616,065 + MPMX20_04417 0.19 -0.9 4,616,073 - MPMX20_04417 0.19 +0.7 4,616,073 - MPMX20_04417 0.19 -1.3 4,616,073 - MPMX20_04417 0.19 +0.3 4,616,080 + MPMX20_04417 0.20 -0.3 4,616,080 + MPMX20_04417 0.20 -0.8 4,616,088 - MPMX20_04417 0.20 +0.5 4,616,088 - MPMX20_04417 0.20 +0.4 4,616,098 - MPMX20_04417 0.20 -2.3 4,616,118 - MPMX20_04417 0.21 +0.7 4,616,134 - MPMX20_04417 0.22 +2.8 4,616,251 + MPMX20_04417 0.27 +1.0 4,616,259 - MPMX20_04417 0.27 -0.1 4,616,259 - MPMX20_04417 0.27 -0.5 4,616,319 + MPMX20_04417 0.30 +0.7 4,616,382 - MPMX20_04417 0.32 +0.8 4,616,399 - MPMX20_04417 0.33 -0.4 4,616,432 - MPMX20_04417 0.34 +0.2 4,616,432 - MPMX20_04417 0.34 -0.1 4,616,441 + MPMX20_04417 0.35 +0.0 4,616,443 - MPMX20_04417 0.35 +0.4 4,616,451 - MPMX20_04417 0.35 +0.1 4,616,459 - MPMX20_04417 0.36 +0.2 4,616,586 + MPMX20_04417 0.41 +1.3
Or see this region's nucleotide sequence