Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00036

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00035 and MPMX20_00036 are separated by 132 nucleotidesMPMX20_00036 and MPMX20_00037 are separated by 156 nucleotides MPMX20_00035: MPMX20_00035 - Membrane sensor protein UhpC, at 36,089 to 37,408 _00035 MPMX20_00036: MPMX20_00036 - Hexose-6-phosphate:phosphate antiporter, at 37,541 to 38,932 _00036 MPMX20_00037: MPMX20_00037 - Putative aminoacrylate hydrolase RutD, at 39,089 to 40,093 _00037 Position (kb) 37 38 39Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 36.548 kb on + strand, within MPMX20_00035at 36.551 kb on + strand, within MPMX20_00035at 36.559 kb on - strand, within MPMX20_00035at 36.559 kb on - strand, within MPMX20_00035at 36.579 kb on - strand, within MPMX20_00035at 36.598 kb on + strand, within MPMX20_00035at 36.606 kb on - strand, within MPMX20_00035at 36.616 kb on + strand, within MPMX20_00035at 36.617 kb on + strand, within MPMX20_00035at 36.624 kb on - strand, within MPMX20_00035at 36.624 kb on - strand, within MPMX20_00035at 36.633 kb on + strand, within MPMX20_00035at 36.711 kb on + strand, within MPMX20_00035at 36.777 kb on + strand, within MPMX20_00035at 36.777 kb on + strand, within MPMX20_00035at 36.777 kb on + strand, within MPMX20_00035at 36.837 kb on + strand, within MPMX20_00035at 36.860 kb on - strand, within MPMX20_00035at 36.862 kb on + strand, within MPMX20_00035at 36.870 kb on - strand, within MPMX20_00035at 36.870 kb on - strand, within MPMX20_00035at 36.870 kb on - strand, within MPMX20_00035at 36.912 kb on + strand, within MPMX20_00035at 36.912 kb on - strand, within MPMX20_00035at 36.934 kb on + strand, within MPMX20_00035at 37.018 kb on - strand, within MPMX20_00035at 37.026 kb on - strand, within MPMX20_00035at 37.228 kb on - strand, within MPMX20_00035at 37.250 kb on - strand, within MPMX20_00035at 37.435 kb on + strandat 37.465 kb on + strandat 37.473 kb on - strandat 37.475 kb on + strandat 37.475 kb on + strandat 37.475 kb on + strandat 37.487 kb on + strandat 37.522 kb on + strandat 37.522 kb on + strandat 37.564 kb on - strandat 37.569 kb on + strandat 37.619 kb on - strandat 37.630 kb on + strandat 37.638 kb on - strandat 37.692 kb on - strand, within MPMX20_00036at 37.756 kb on + strand, within MPMX20_00036at 37.778 kb on - strand, within MPMX20_00036at 37.780 kb on + strand, within MPMX20_00036at 37.789 kb on - strand, within MPMX20_00036at 37.917 kb on - strand, within MPMX20_00036at 38.083 kb on - strand, within MPMX20_00036at 38.118 kb on - strand, within MPMX20_00036at 38.185 kb on - strand, within MPMX20_00036at 38.227 kb on - strand, within MPMX20_00036at 38.236 kb on + strand, within MPMX20_00036at 38.249 kb on + strand, within MPMX20_00036at 38.256 kb on - strand, within MPMX20_00036at 38.380 kb on + strand, within MPMX20_00036at 38.390 kb on + strand, within MPMX20_00036at 38.398 kb on - strand, within MPMX20_00036at 38.400 kb on + strand, within MPMX20_00036at 38.405 kb on - strand, within MPMX20_00036at 38.432 kb on + strand, within MPMX20_00036at 38.432 kb on + strand, within MPMX20_00036at 38.432 kb on + strand, within MPMX20_00036at 38.432 kb on + strand, within MPMX20_00036at 38.439 kb on + strand, within MPMX20_00036at 38.439 kb on + strand, within MPMX20_00036at 38.440 kb on - strand, within MPMX20_00036at 38.440 kb on - strand, within MPMX20_00036at 38.440 kb on - strand, within MPMX20_00036at 38.447 kb on - strand, within MPMX20_00036at 38.457 kb on - strand, within MPMX20_00036at 38.472 kb on + strand, within MPMX20_00036at 38.475 kb on - strand, within MPMX20_00036at 38.479 kb on + strand, within MPMX20_00036at 38.485 kb on - strand, within MPMX20_00036at 38.488 kb on - strand, within MPMX20_00036at 38.538 kb on + strand, within MPMX20_00036at 38.565 kb on + strand, within MPMX20_00036at 38.565 kb on + strand, within MPMX20_00036at 38.622 kb on + strand, within MPMX20_00036at 38.622 kb on + strand, within MPMX20_00036at 38.637 kb on + strand, within MPMX20_00036at 38.637 kb on + strand, within MPMX20_00036at 38.645 kb on - strand, within MPMX20_00036at 38.645 kb on - strand, within MPMX20_00036at 38.678 kb on - strand, within MPMX20_00036at 38.735 kb on + strand, within MPMX20_00036at 38.875 kb on + strandat 38.893 kb on - strandat 38.933 kb on + strandat 38.963 kb on - strandat 38.999 kb on + strandat 39.002 kb on + strandat 39.015 kb on - strandat 39.020 kb on - strandat 39.081 kb on - strandat 39.104 kb on - strandat 39.111 kb on + strandat 39.114 kb on - strandat 39.128 kb on + strandat 39.156 kb on - strandat 39.186 kb on - strandat 39.196 kb on + strand, within MPMX20_00037at 39.196 kb on + strand, within MPMX20_00037at 39.199 kb on - strand, within MPMX20_00037at 39.263 kb on - strand, within MPMX20_00037at 39.291 kb on + strand, within MPMX20_00037at 39.381 kb on + strand, within MPMX20_00037at 39.388 kb on - strand, within MPMX20_00037at 39.425 kb on + strand, within MPMX20_00037at 39.435 kb on - strand, within MPMX20_00037at 39.443 kb on - strand, within MPMX20_00037at 39.465 kb on - strand, within MPMX20_00037at 39.547 kb on + strand, within MPMX20_00037at 39.550 kb on - strand, within MPMX20_00037at 39.555 kb on - strand, within MPMX20_00037at 39.569 kb on - strand, within MPMX20_00037at 39.574 kb on + strand, within MPMX20_00037at 39.580 kb on + strand, within MPMX20_00037at 39.587 kb on - strand, within MPMX20_00037at 39.602 kb on - strand, within MPMX20_00037at 39.651 kb on + strand, within MPMX20_00037at 39.659 kb on + strand, within MPMX20_00037at 39.659 kb on + strand, within MPMX20_00037at 39.667 kb on - strand, within MPMX20_00037at 39.678 kb on + strand, within MPMX20_00037at 39.708 kb on + strand, within MPMX20_00037at 39.716 kb on - strand, within MPMX20_00037at 39.726 kb on - strand, within MPMX20_00037at 39.791 kb on + strand, within MPMX20_00037at 39.798 kb on + strand, within MPMX20_00037at 39.799 kb on - strand, within MPMX20_00037at 39.803 kb on + strand, within MPMX20_00037at 39.803 kb on + strand, within MPMX20_00037at 39.806 kb on - strand, within MPMX20_00037at 39.806 kb on - strand, within MPMX20_00037at 39.811 kb on - strand, within MPMX20_00037at 39.820 kb on + strand, within MPMX20_00037at 39.820 kb on + strand, within MPMX20_00037at 39.820 kb on + strand, within MPMX20_00037at 39.840 kb on + strand, within MPMX20_00037at 39.862 kb on - strand, within MPMX20_00037

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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36,548 + MPMX20_00035 0.35 -1.9
36,551 + MPMX20_00035 0.35 -1.3
36,559 - MPMX20_00035 0.36 -0.8
36,559 - MPMX20_00035 0.36 -1.9
36,579 - MPMX20_00035 0.37 -0.4
36,598 + MPMX20_00035 0.39 -2.3
36,606 - MPMX20_00035 0.39 -2.7
36,616 + MPMX20_00035 0.40 -2.3
36,617 + MPMX20_00035 0.40 +0.0
36,624 - MPMX20_00035 0.41 +0.1
36,624 - MPMX20_00035 0.41 -2.9
36,633 + MPMX20_00035 0.41 -1.4
36,711 + MPMX20_00035 0.47 -0.9
36,777 + MPMX20_00035 0.52 -0.7
36,777 + MPMX20_00035 0.52 -1.0
36,777 + MPMX20_00035 0.52 -0.6
36,837 + MPMX20_00035 0.57 -2.6
36,860 - MPMX20_00035 0.58 -1.8
36,862 + MPMX20_00035 0.59 +0.7
36,870 - MPMX20_00035 0.59 -2.8
36,870 - MPMX20_00035 0.59 -2.2
36,870 - MPMX20_00035 0.59 +2.3
36,912 + MPMX20_00035 0.62 -0.5
36,912 - MPMX20_00035 0.62 -2.2
36,934 + MPMX20_00035 0.64 -2.1
37,018 - MPMX20_00035 0.70 -1.3
37,026 - MPMX20_00035 0.71 +0.2
37,228 - MPMX20_00035 0.86 -2.1
37,250 - MPMX20_00035 0.88 -4.0
37,435 + -2.0
37,465 + -2.1
37,473 - -1.8
37,475 + -1.0
37,475 + +0.3
37,475 + -1.1
37,487 + -2.3
37,522 + +0.0
37,522 + -0.7
37,564 - -0.3
37,569 + +0.6
37,619 - -3.2
37,630 + -2.1
37,638 - -1.0
37,692 - MPMX20_00036 0.11 -1.4
37,756 + MPMX20_00036 0.15 -0.9
37,778 - MPMX20_00036 0.17 -2.7
37,780 + MPMX20_00036 0.17 +0.2
37,789 - MPMX20_00036 0.18 +0.7
37,917 - MPMX20_00036 0.27 +0.6
38,083 - MPMX20_00036 0.39 -0.5
38,118 - MPMX20_00036 0.41 +1.9
38,185 - MPMX20_00036 0.46 -1.0
38,227 - MPMX20_00036 0.49 -2.1
38,236 + MPMX20_00036 0.50 +1.1
38,249 + MPMX20_00036 0.51 -3.3
38,256 - MPMX20_00036 0.51 -1.8
38,380 + MPMX20_00036 0.60 +0.1
38,390 + MPMX20_00036 0.61 -2.1
38,398 - MPMX20_00036 0.62 -2.7
38,400 + MPMX20_00036 0.62 -0.0
38,405 - MPMX20_00036 0.62 +0.7
38,432 + MPMX20_00036 0.64 -0.3
38,432 + MPMX20_00036 0.64 -2.9
38,432 + MPMX20_00036 0.64 -2.2
38,432 + MPMX20_00036 0.64 -3.3
38,439 + MPMX20_00036 0.65 +1.3
38,439 + MPMX20_00036 0.65 -0.9
38,440 - MPMX20_00036 0.65 -0.5
38,440 - MPMX20_00036 0.65 -0.1
38,440 - MPMX20_00036 0.65 -1.9
38,447 - MPMX20_00036 0.65 -1.7
38,457 - MPMX20_00036 0.66 -1.6
38,472 + MPMX20_00036 0.67 -3.9
38,475 - MPMX20_00036 0.67 -0.8
38,479 + MPMX20_00036 0.67 -2.2
38,485 - MPMX20_00036 0.68 -1.4
38,488 - MPMX20_00036 0.68 -1.2
38,538 + MPMX20_00036 0.72 -4.3
38,565 + MPMX20_00036 0.74 +1.6
38,565 + MPMX20_00036 0.74 -0.9
38,622 + MPMX20_00036 0.78 -0.1
38,622 + MPMX20_00036 0.78 -1.9
38,637 + MPMX20_00036 0.79 -2.2
38,637 + MPMX20_00036 0.79 -1.2
38,645 - MPMX20_00036 0.79 -2.2
38,645 - MPMX20_00036 0.79 +1.1
38,678 - MPMX20_00036 0.82 -1.6
38,735 + MPMX20_00036 0.86 -2.0
38,875 + -0.1
38,893 - -1.7
38,933 + -1.0
38,963 - -1.9
38,999 + -0.6
39,002 + -0.5
39,015 - +1.0
39,020 - +0.7
39,081 - -0.6
39,104 - -0.3
39,111 + -0.9
39,114 - -1.2
39,128 + -1.7
39,156 - -0.6
39,186 - +0.5
39,196 + MPMX20_00037 0.11 +1.0
39,196 + MPMX20_00037 0.11 -0.2
39,199 - MPMX20_00037 0.11 +1.5
39,263 - MPMX20_00037 0.17 -0.8
39,291 + MPMX20_00037 0.20 +0.2
39,381 + MPMX20_00037 0.29 -1.3
39,388 - MPMX20_00037 0.30 +0.9
39,425 + MPMX20_00037 0.33 -2.9
39,435 - MPMX20_00037 0.34 -0.6
39,443 - MPMX20_00037 0.35 +0.4
39,465 - MPMX20_00037 0.37 -0.5
39,547 + MPMX20_00037 0.46 +0.6
39,550 - MPMX20_00037 0.46 -0.5
39,555 - MPMX20_00037 0.46 -0.3
39,569 - MPMX20_00037 0.48 +0.3
39,574 + MPMX20_00037 0.48 +0.5
39,580 + MPMX20_00037 0.49 -0.2
39,587 - MPMX20_00037 0.50 -1.2
39,602 - MPMX20_00037 0.51 +0.1
39,651 + MPMX20_00037 0.56 +0.5
39,659 + MPMX20_00037 0.57 -0.8
39,659 + MPMX20_00037 0.57 -0.8
39,667 - MPMX20_00037 0.58 -0.0
39,678 + MPMX20_00037 0.59 +1.1
39,708 + MPMX20_00037 0.62 +1.0
39,716 - MPMX20_00037 0.62 -0.4
39,726 - MPMX20_00037 0.63 -0.3
39,791 + MPMX20_00037 0.70 -0.9
39,798 + MPMX20_00037 0.71 -0.1
39,799 - MPMX20_00037 0.71 -0.7
39,803 + MPMX20_00037 0.71 -0.3
39,803 + MPMX20_00037 0.71 +0.4
39,806 - MPMX20_00037 0.71 -0.5
39,806 - MPMX20_00037 0.71 +0.3
39,811 - MPMX20_00037 0.72 -0.6
39,820 + MPMX20_00037 0.73 -0.6
39,820 + MPMX20_00037 0.73 -0.7
39,820 + MPMX20_00037 0.73 +1.1
39,840 + MPMX20_00037 0.75 -0.9
39,862 - MPMX20_00037 0.77 +0.5

Or see this region's nucleotide sequence