Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00035

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00034 and MPMX20_00035 overlap by 8 nucleotidesMPMX20_00035 and MPMX20_00036 are separated by 132 nucleotides MPMX20_00034: MPMX20_00034 - Signal transduction histidine-protein kinase/phosphatase UhpB, at 34,591 to 36,096 _00034 MPMX20_00035: MPMX20_00035 - Membrane sensor protein UhpC, at 36,089 to 37,408 _00035 MPMX20_00036: MPMX20_00036 - Hexose-6-phosphate:phosphate antiporter, at 37,541 to 38,932 _00036 Position (kb) 36 37 38Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 35.174 kb on + strand, within MPMX20_00034at 35.182 kb on - strand, within MPMX20_00034at 35.186 kb on + strand, within MPMX20_00034at 35.186 kb on + strand, within MPMX20_00034at 35.186 kb on + strand, within MPMX20_00034at 35.303 kb on - strand, within MPMX20_00034at 35.303 kb on - strand, within MPMX20_00034at 35.402 kb on + strand, within MPMX20_00034at 35.437 kb on - strand, within MPMX20_00034at 35.491 kb on - strand, within MPMX20_00034at 35.531 kb on + strand, within MPMX20_00034at 35.565 kb on + strand, within MPMX20_00034at 35.611 kb on - strand, within MPMX20_00034at 35.639 kb on + strand, within MPMX20_00034at 35.639 kb on + strand, within MPMX20_00034at 35.647 kb on - strand, within MPMX20_00034at 35.647 kb on - strand, within MPMX20_00034at 35.702 kb on + strand, within MPMX20_00034at 35.702 kb on + strand, within MPMX20_00034at 35.803 kb on - strand, within MPMX20_00034at 35.832 kb on - strand, within MPMX20_00034at 35.837 kb on - strand, within MPMX20_00034at 35.840 kb on + strand, within MPMX20_00034at 35.876 kb on + strand, within MPMX20_00034at 35.882 kb on + strand, within MPMX20_00034at 35.912 kb on + strand, within MPMX20_00034at 35.971 kb on - strandat 36.069 kb on - strandat 36.091 kb on + strandat 36.091 kb on + strandat 36.099 kb on - strandat 36.173 kb on - strandat 36.173 kb on - strandat 36.200 kb on - strandat 36.296 kb on + strand, within MPMX20_00035at 36.298 kb on + strand, within MPMX20_00035at 36.306 kb on - strand, within MPMX20_00035at 36.309 kb on + strand, within MPMX20_00035at 36.309 kb on + strand, within MPMX20_00035at 36.317 kb on - strand, within MPMX20_00035at 36.317 kb on - strand, within MPMX20_00035at 36.375 kb on + strand, within MPMX20_00035at 36.375 kb on + strand, within MPMX20_00035at 36.375 kb on + strand, within MPMX20_00035at 36.375 kb on + strand, within MPMX20_00035at 36.383 kb on - strand, within MPMX20_00035at 36.383 kb on - strand, within MPMX20_00035at 36.383 kb on - strand, within MPMX20_00035at 36.443 kb on + strand, within MPMX20_00035at 36.448 kb on + strand, within MPMX20_00035at 36.548 kb on + strand, within MPMX20_00035at 36.551 kb on + strand, within MPMX20_00035at 36.559 kb on - strand, within MPMX20_00035at 36.559 kb on - strand, within MPMX20_00035at 36.579 kb on - strand, within MPMX20_00035at 36.598 kb on + strand, within MPMX20_00035at 36.606 kb on - strand, within MPMX20_00035at 36.616 kb on + strand, within MPMX20_00035at 36.617 kb on + strand, within MPMX20_00035at 36.624 kb on - strand, within MPMX20_00035at 36.624 kb on - strand, within MPMX20_00035at 36.633 kb on + strand, within MPMX20_00035at 36.711 kb on + strand, within MPMX20_00035at 36.777 kb on + strand, within MPMX20_00035at 36.777 kb on + strand, within MPMX20_00035at 36.777 kb on + strand, within MPMX20_00035at 36.837 kb on + strand, within MPMX20_00035at 36.860 kb on - strand, within MPMX20_00035at 36.862 kb on + strand, within MPMX20_00035at 36.870 kb on - strand, within MPMX20_00035at 36.870 kb on - strand, within MPMX20_00035at 36.870 kb on - strand, within MPMX20_00035at 36.912 kb on + strand, within MPMX20_00035at 36.912 kb on - strand, within MPMX20_00035at 36.934 kb on + strand, within MPMX20_00035at 37.018 kb on - strand, within MPMX20_00035at 37.026 kb on - strand, within MPMX20_00035at 37.228 kb on - strand, within MPMX20_00035at 37.250 kb on - strand, within MPMX20_00035at 37.435 kb on + strandat 37.465 kb on + strandat 37.473 kb on - strandat 37.475 kb on + strandat 37.475 kb on + strandat 37.475 kb on + strandat 37.487 kb on + strandat 37.522 kb on + strandat 37.522 kb on + strandat 37.564 kb on - strandat 37.569 kb on + strandat 37.619 kb on - strandat 37.630 kb on + strandat 37.638 kb on - strandat 37.692 kb on - strand, within MPMX20_00036at 37.756 kb on + strand, within MPMX20_00036at 37.778 kb on - strand, within MPMX20_00036at 37.780 kb on + strand, within MPMX20_00036at 37.789 kb on - strand, within MPMX20_00036at 37.917 kb on - strand, within MPMX20_00036at 38.083 kb on - strand, within MPMX20_00036at 38.118 kb on - strand, within MPMX20_00036at 38.185 kb on - strand, within MPMX20_00036at 38.227 kb on - strand, within MPMX20_00036at 38.236 kb on + strand, within MPMX20_00036at 38.249 kb on + strand, within MPMX20_00036at 38.256 kb on - strand, within MPMX20_00036at 38.380 kb on + strand, within MPMX20_00036at 38.390 kb on + strand, within MPMX20_00036at 38.398 kb on - strand, within MPMX20_00036at 38.400 kb on + strand, within MPMX20_00036at 38.405 kb on - strand, within MPMX20_00036

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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35,174 + MPMX20_00034 0.39 +0.3
35,182 - MPMX20_00034 0.39 +0.1
35,186 + MPMX20_00034 0.40 -3.4
35,186 + MPMX20_00034 0.40 -0.1
35,186 + MPMX20_00034 0.40 -1.7
35,303 - MPMX20_00034 0.47 -1.5
35,303 - MPMX20_00034 0.47 -1.4
35,402 + MPMX20_00034 0.54 -1.1
35,437 - MPMX20_00034 0.56 -2.5
35,491 - MPMX20_00034 0.60 -1.0
35,531 + MPMX20_00034 0.62 -1.5
35,565 + MPMX20_00034 0.65 -1.0
35,611 - MPMX20_00034 0.68 -2.5
35,639 + MPMX20_00034 0.70 -3.0
35,639 + MPMX20_00034 0.70 -1.5
35,647 - MPMX20_00034 0.70 -0.1
35,647 - MPMX20_00034 0.70 -1.7
35,702 + MPMX20_00034 0.74 +0.2
35,702 + MPMX20_00034 0.74 -0.7
35,803 - MPMX20_00034 0.80 -3.3
35,832 - MPMX20_00034 0.82 +0.6
35,837 - MPMX20_00034 0.83 -1.3
35,840 + MPMX20_00034 0.83 -0.8
35,876 + MPMX20_00034 0.85 -1.3
35,882 + MPMX20_00034 0.86 -0.9
35,912 + MPMX20_00034 0.88 -0.8
35,971 - -1.7
36,069 - -0.4
36,091 + -1.8
36,091 + -1.4
36,099 - -0.2
36,173 - +1.1
36,173 - -1.2
36,200 - -3.1
36,296 + MPMX20_00035 0.16 -1.6
36,298 + MPMX20_00035 0.16 +0.1
36,306 - MPMX20_00035 0.16 -3.3
36,309 + MPMX20_00035 0.17 -1.7
36,309 + MPMX20_00035 0.17 -1.6
36,317 - MPMX20_00035 0.17 -1.0
36,317 - MPMX20_00035 0.17 -2.4
36,375 + MPMX20_00035 0.22 +1.9
36,375 + MPMX20_00035 0.22 -0.5
36,375 + MPMX20_00035 0.22 -1.9
36,375 + MPMX20_00035 0.22 -3.5
36,383 - MPMX20_00035 0.22 -2.9
36,383 - MPMX20_00035 0.22 +1.1
36,383 - MPMX20_00035 0.22 -1.7
36,443 + MPMX20_00035 0.27 -2.1
36,448 + MPMX20_00035 0.27 -1.0
36,548 + MPMX20_00035 0.35 -1.9
36,551 + MPMX20_00035 0.35 -1.3
36,559 - MPMX20_00035 0.36 -0.8
36,559 - MPMX20_00035 0.36 -1.9
36,579 - MPMX20_00035 0.37 -0.4
36,598 + MPMX20_00035 0.39 -2.3
36,606 - MPMX20_00035 0.39 -2.7
36,616 + MPMX20_00035 0.40 -2.3
36,617 + MPMX20_00035 0.40 +0.0
36,624 - MPMX20_00035 0.41 +0.1
36,624 - MPMX20_00035 0.41 -2.9
36,633 + MPMX20_00035 0.41 -1.4
36,711 + MPMX20_00035 0.47 -0.9
36,777 + MPMX20_00035 0.52 -0.7
36,777 + MPMX20_00035 0.52 -1.0
36,777 + MPMX20_00035 0.52 -0.6
36,837 + MPMX20_00035 0.57 -2.6
36,860 - MPMX20_00035 0.58 -1.8
36,862 + MPMX20_00035 0.59 +0.7
36,870 - MPMX20_00035 0.59 -2.8
36,870 - MPMX20_00035 0.59 -2.2
36,870 - MPMX20_00035 0.59 +2.3
36,912 + MPMX20_00035 0.62 -0.5
36,912 - MPMX20_00035 0.62 -2.2
36,934 + MPMX20_00035 0.64 -2.1
37,018 - MPMX20_00035 0.70 -1.3
37,026 - MPMX20_00035 0.71 +0.2
37,228 - MPMX20_00035 0.86 -2.1
37,250 - MPMX20_00035 0.88 -4.0
37,435 + -2.0
37,465 + -2.1
37,473 - -1.8
37,475 + -1.0
37,475 + +0.3
37,475 + -1.1
37,487 + -2.3
37,522 + +0.0
37,522 + -0.7
37,564 - -0.3
37,569 + +0.6
37,619 - -3.2
37,630 + -2.1
37,638 - -1.0
37,692 - MPMX20_00036 0.11 -1.4
37,756 + MPMX20_00036 0.15 -0.9
37,778 - MPMX20_00036 0.17 -2.7
37,780 + MPMX20_00036 0.17 +0.2
37,789 - MPMX20_00036 0.18 +0.7
37,917 - MPMX20_00036 0.27 +0.6
38,083 - MPMX20_00036 0.39 -0.5
38,118 - MPMX20_00036 0.41 +1.9
38,185 - MPMX20_00036 0.46 -1.0
38,227 - MPMX20_00036 0.49 -2.1
38,236 + MPMX20_00036 0.50 +1.1
38,249 + MPMX20_00036 0.51 -3.3
38,256 - MPMX20_00036 0.51 -1.8
38,380 + MPMX20_00036 0.60 +0.1
38,390 + MPMX20_00036 0.61 -2.1
38,398 - MPMX20_00036 0.62 -2.7
38,400 + MPMX20_00036 0.62 -0.0
38,405 - MPMX20_00036 0.62 +0.7

Or see this region's nucleotide sequence