Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00033

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00031 and MPMX20_00032 are separated by 3 nucleotidesMPMX20_00032 and MPMX20_00033 are separated by 73 nucleotidesMPMX20_00033 and MPMX20_00034 overlap by 4 nucleotides MPMX20_00031: MPMX20_00031 - Acetolactate synthase isozyme 1 large subunit, at 31,948 to 33,636 _00031 MPMX20_00032: MPMX20_00032 - Acetolactate synthase isozyme 1 small subunit, at 33,640 to 33,927 _00032 MPMX20_00033: MPMX20_00033 - Transcriptional regulatory protein UhpA, at 34,001 to 34,594 _00033 MPMX20_00034: MPMX20_00034 - Signal transduction histidine-protein kinase/phosphatase UhpB, at 34,591 to 36,096 _00034 Position (kb) 34 35Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 33.031 kb on - strand, within MPMX20_00031at 33.066 kb on + strand, within MPMX20_00031at 33.066 kb on + strand, within MPMX20_00031at 33.066 kb on + strand, within MPMX20_00031at 33.066 kb on + strand, within MPMX20_00031at 33.094 kb on - strand, within MPMX20_00031at 33.096 kb on - strand, within MPMX20_00031at 33.116 kb on + strand, within MPMX20_00031at 33.116 kb on + strand, within MPMX20_00031at 33.124 kb on - strand, within MPMX20_00031at 33.132 kb on + strand, within MPMX20_00031at 33.140 kb on - strand, within MPMX20_00031at 33.140 kb on - strand, within MPMX20_00031at 33.140 kb on - strand, within MPMX20_00031at 33.140 kb on - strand, within MPMX20_00031at 33.142 kb on + strand, within MPMX20_00031at 33.142 kb on + strand, within MPMX20_00031at 33.142 kb on + strand, within MPMX20_00031at 33.142 kb on + strand, within MPMX20_00031at 33.142 kb on + strand, within MPMX20_00031at 33.142 kb on + strand, within MPMX20_00031at 33.147 kb on + strand, within MPMX20_00031at 33.147 kb on + strand, within MPMX20_00031at 33.150 kb on - strand, within MPMX20_00031at 33.150 kb on - strand, within MPMX20_00031at 33.150 kb on - strand, within MPMX20_00031at 33.150 kb on - strand, within MPMX20_00031at 33.150 kb on - strand, within MPMX20_00031at 33.150 kb on - strand, within MPMX20_00031at 33.154 kb on + strand, within MPMX20_00031at 33.155 kb on - strand, within MPMX20_00031at 33.198 kb on - strand, within MPMX20_00031at 33.240 kb on + strand, within MPMX20_00031at 33.240 kb on + strand, within MPMX20_00031at 33.248 kb on - strand, within MPMX20_00031at 33.404 kb on - strand, within MPMX20_00031at 33.418 kb on + strand, within MPMX20_00031at 33.436 kb on - strand, within MPMX20_00031at 33.464 kb on + strand, within MPMX20_00031at 33.689 kb on + strand, within MPMX20_00032at 33.690 kb on + strand, within MPMX20_00032at 33.710 kb on + strand, within MPMX20_00032at 33.766 kb on + strand, within MPMX20_00032at 33.801 kb on + strand, within MPMX20_00032at 33.809 kb on - strand, within MPMX20_00032at 33.931 kb on + strandat 33.938 kb on + strandat 33.939 kb on - strandat 33.946 kb on - strandat 33.986 kb on + strandat 34.008 kb on + strandat 34.016 kb on - strandat 34.074 kb on - strand, within MPMX20_00033at 34.142 kb on + strand, within MPMX20_00033at 34.142 kb on + strand, within MPMX20_00033at 34.148 kb on - strand, within MPMX20_00033at 34.150 kb on - strand, within MPMX20_00033at 34.150 kb on - strand, within MPMX20_00033at 34.179 kb on + strand, within MPMX20_00033at 34.238 kb on + strand, within MPMX20_00033at 34.238 kb on + strand, within MPMX20_00033at 34.246 kb on - strand, within MPMX20_00033at 34.263 kb on + strand, within MPMX20_00033at 34.271 kb on - strand, within MPMX20_00033at 34.343 kb on + strand, within MPMX20_00033at 34.406 kb on + strand, within MPMX20_00033at 34.422 kb on - strand, within MPMX20_00033at 34.435 kb on - strand, within MPMX20_00033at 34.518 kb on + strand, within MPMX20_00033at 34.518 kb on + strand, within MPMX20_00033at 34.518 kb on + strand, within MPMX20_00033at 34.676 kb on + strandat 34.694 kb on - strandat 34.763 kb on + strand, within MPMX20_00034at 34.779 kb on + strand, within MPMX20_00034at 34.872 kb on + strand, within MPMX20_00034at 34.882 kb on + strand, within MPMX20_00034at 34.960 kb on + strand, within MPMX20_00034at 34.962 kb on + strand, within MPMX20_00034at 34.970 kb on - strand, within MPMX20_00034at 34.970 kb on - strand, within MPMX20_00034at 34.998 kb on + strand, within MPMX20_00034at 35.006 kb on + strand, within MPMX20_00034at 35.008 kb on + strand, within MPMX20_00034at 35.014 kb on - strand, within MPMX20_00034at 35.029 kb on + strand, within MPMX20_00034at 35.049 kb on - strand, within MPMX20_00034at 35.049 kb on - strand, within MPMX20_00034at 35.073 kb on + strand, within MPMX20_00034at 35.081 kb on - strand, within MPMX20_00034at 35.174 kb on + strand, within MPMX20_00034at 35.182 kb on - strand, within MPMX20_00034at 35.186 kb on + strand, within MPMX20_00034at 35.186 kb on + strand, within MPMX20_00034at 35.186 kb on + strand, within MPMX20_00034at 35.303 kb on - strand, within MPMX20_00034at 35.303 kb on - strand, within MPMX20_00034at 35.402 kb on + strand, within MPMX20_00034at 35.437 kb on - strand, within MPMX20_00034at 35.491 kb on - strand, within MPMX20_00034at 35.531 kb on + strand, within MPMX20_00034at 35.565 kb on + strand, within MPMX20_00034

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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33,031 - MPMX20_00031 0.64 -0.4
33,066 + MPMX20_00031 0.66 -1.8
33,066 + MPMX20_00031 0.66 +0.0
33,066 + MPMX20_00031 0.66 +0.2
33,066 + MPMX20_00031 0.66 -0.3
33,094 - MPMX20_00031 0.68 -1.4
33,096 - MPMX20_00031 0.68 +1.0
33,116 + MPMX20_00031 0.69 +1.8
33,116 + MPMX20_00031 0.69 -0.4
33,124 - MPMX20_00031 0.70 +0.4
33,132 + MPMX20_00031 0.70 +0.0
33,140 - MPMX20_00031 0.71 -0.1
33,140 - MPMX20_00031 0.71 +0.5
33,140 - MPMX20_00031 0.71 -2.4
33,140 - MPMX20_00031 0.71 +0.6
33,142 + MPMX20_00031 0.71 -0.7
33,142 + MPMX20_00031 0.71 +0.5
33,142 + MPMX20_00031 0.71 -0.2
33,142 + MPMX20_00031 0.71 +1.1
33,142 + MPMX20_00031 0.71 -0.9
33,142 + MPMX20_00031 0.71 -0.9
33,147 + MPMX20_00031 0.71 +0.1
33,147 + MPMX20_00031 0.71 -0.1
33,150 - MPMX20_00031 0.71 +1.5
33,150 - MPMX20_00031 0.71 +0.4
33,150 - MPMX20_00031 0.71 +0.1
33,150 - MPMX20_00031 0.71 -0.1
33,150 - MPMX20_00031 0.71 -2.0
33,150 - MPMX20_00031 0.71 -0.5
33,154 + MPMX20_00031 0.71 -0.3
33,155 - MPMX20_00031 0.71 -0.0
33,198 - MPMX20_00031 0.74 +0.1
33,240 + MPMX20_00031 0.76 -1.3
33,240 + MPMX20_00031 0.76 +1.8
33,248 - MPMX20_00031 0.77 +0.6
33,404 - MPMX20_00031 0.86 +1.1
33,418 + MPMX20_00031 0.87 +0.9
33,436 - MPMX20_00031 0.88 -0.2
33,464 + MPMX20_00031 0.90 -1.8
33,689 + MPMX20_00032 0.17 -1.2
33,690 + MPMX20_00032 0.17 -0.3
33,710 + MPMX20_00032 0.24 -0.0
33,766 + MPMX20_00032 0.44 -0.9
33,801 + MPMX20_00032 0.56 +0.3
33,809 - MPMX20_00032 0.59 -0.4
33,931 + -0.1
33,938 + +0.3
33,939 - -0.5
33,946 - +0.4
33,986 + -0.6
34,008 + -0.2
34,016 - -1.1
34,074 - MPMX20_00033 0.12 -1.4
34,142 + MPMX20_00033 0.24 -2.7
34,142 + MPMX20_00033 0.24 +1.1
34,148 - MPMX20_00033 0.25 -1.8
34,150 - MPMX20_00033 0.25 -0.1
34,150 - MPMX20_00033 0.25 -1.4
34,179 + MPMX20_00033 0.30 -1.0
34,238 + MPMX20_00033 0.40 +0.2
34,238 + MPMX20_00033 0.40 -0.7
34,246 - MPMX20_00033 0.41 -2.1
34,263 + MPMX20_00033 0.44 -1.8
34,271 - MPMX20_00033 0.45 -1.6
34,343 + MPMX20_00033 0.58 -0.6
34,406 + MPMX20_00033 0.68 -1.7
34,422 - MPMX20_00033 0.71 -0.7
34,435 - MPMX20_00033 0.73 -1.6
34,518 + MPMX20_00033 0.87 -0.2
34,518 + MPMX20_00033 0.87 -1.7
34,518 + MPMX20_00033 0.87 -1.0
34,676 + -2.0
34,694 - -1.7
34,763 + MPMX20_00034 0.11 -0.6
34,779 + MPMX20_00034 0.12 -1.8
34,872 + MPMX20_00034 0.19 -1.6
34,882 + MPMX20_00034 0.19 -1.9
34,960 + MPMX20_00034 0.25 -4.4
34,962 + MPMX20_00034 0.25 +0.1
34,970 - MPMX20_00034 0.25 +2.1
34,970 - MPMX20_00034 0.25 -2.4
34,998 + MPMX20_00034 0.27 -0.8
35,006 + MPMX20_00034 0.28 +0.6
35,008 + MPMX20_00034 0.28 -0.2
35,014 - MPMX20_00034 0.28 +0.3
35,029 + MPMX20_00034 0.29 -1.4
35,049 - MPMX20_00034 0.30 -2.6
35,049 - MPMX20_00034 0.30 +1.0
35,073 + MPMX20_00034 0.32 -3.4
35,081 - MPMX20_00034 0.33 -0.2
35,174 + MPMX20_00034 0.39 +0.3
35,182 - MPMX20_00034 0.39 +0.1
35,186 + MPMX20_00034 0.40 -3.4
35,186 + MPMX20_00034 0.40 -0.1
35,186 + MPMX20_00034 0.40 -1.7
35,303 - MPMX20_00034 0.47 -1.5
35,303 - MPMX20_00034 0.47 -1.4
35,402 + MPMX20_00034 0.54 -1.1
35,437 - MPMX20_00034 0.56 -2.5
35,491 - MPMX20_00034 0.60 -1.0
35,531 + MPMX20_00034 0.62 -1.5
35,565 + MPMX20_00034 0.65 -1.0

Or see this region's nucleotide sequence