Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03951

Experiment: Itaconic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Itaconic Acid (C)
4,150,647	+				-0.3
4,150,649	-				-1.0
4,150,649	-				-0.2
4,150,655	-				+0.0
4,150,656	-				-1.8
4,150,656	-				+5.1
4,150,656	-				+2.7
4,150,656	-				-0.8
4,150,656	-				-0.7
4,150,671	-				-0.4
4,150,677	-				+1.8
4,150,677	-				+0.5
4,150,693	-		MPMX20_03950	0.10	+1.8
4,150,695	+		MPMX20_03950	0.11	+1.5
4,150,697	-		MPMX20_03950	0.11	-0.3
4,150,698	-		MPMX20_03950	0.11	+0.1
4,150,698	-		MPMX20_03950	0.11	-0.6
4,150,702	-		MPMX20_03950	0.11	+0.5
4,150,702	-		MPMX20_03950	0.11	-0.3
4,150,703	-		MPMX20_03950	0.11	-2.7
4,150,703	-		MPMX20_03950	0.11	-0.1
4,150,703	-		MPMX20_03950	0.11	-1.8
4,150,703	-		MPMX20_03950	0.11	-0.3
4,150,703	-		MPMX20_03950	0.11	+0.5
4,150,703	-		MPMX20_03950	0.11	-2.1
4,150,703	-		MPMX20_03950	0.11	-2.5
4,150,703	-		MPMX20_03950	0.11	-0.9
4,150,703	-		MPMX20_03950	0.11	+0.4
4,150,723	+		MPMX20_03950	0.13	-1.5
4,150,734	+		MPMX20_03950	0.14	+0.2
4,150,734	+		MPMX20_03950	0.14	-0.5
4,150,735	+		MPMX20_03950	0.15	-0.8
4,150,736	-		MPMX20_03950	0.15	-1.0
4,150,741	+		MPMX20_03950	0.15	+0.9
4,150,741	-		MPMX20_03950	0.15	-0.3
4,150,742	-		MPMX20_03950	0.15	-0.7
4,150,742	-		MPMX20_03950	0.15	-1.1
4,150,742	-		MPMX20_03950	0.15	-1.7
4,150,742	-		MPMX20_03950	0.15	-0.3
4,150,742	-		MPMX20_03950	0.15	-1.3
4,150,742	-		MPMX20_03950	0.15	-0.5
4,150,742	-		MPMX20_03950	0.15	-0.7
4,150,742	-		MPMX20_03950	0.15	-0.9
4,150,742	-		MPMX20_03950	0.15	+1.1
4,150,742	-		MPMX20_03950	0.15	-2.1
4,150,742	-		MPMX20_03950	0.15	+0.1
4,150,742	-		MPMX20_03950	0.15	-1.1
4,150,742	-		MPMX20_03950	0.15	+0.8
4,150,742	-		MPMX20_03950	0.15	-3.3
4,150,743	-		MPMX20_03950	0.15	-0.3
4,150,743	-		MPMX20_03950	0.15	-0.4
4,150,743	-		MPMX20_03950	0.15	+1.2
4,150,748	-		MPMX20_03950	0.16	-0.3
4,150,749	-		MPMX20_03950	0.16	+1.2
4,150,754	+		MPMX20_03950	0.16	+2.2
4,150,754	+		MPMX20_03950	0.16	-4.4
4,150,760	-		MPMX20_03950	0.17	-1.6
4,150,762	-		MPMX20_03950	0.17	+1.7
4,150,762	-		MPMX20_03950	0.17	+0.3
4,150,767	-		MPMX20_03950	0.18	+1.1
4,150,791	+		MPMX20_03950	0.20	-0.7
4,150,791	-		MPMX20_03950	0.20	+1.4
4,150,797	-		MPMX20_03950	0.21	+0.7
4,150,797	-		MPMX20_03950	0.21	-0.3
4,150,797	-		MPMX20_03950	0.21	+0.8
4,150,799	-		MPMX20_03950	0.21	-3.1
4,150,799	-		MPMX20_03950	0.21	+0.3
4,150,799	-		MPMX20_03950	0.21	-2.5
4,150,804	-		MPMX20_03950	0.21	-3.1
4,150,809	+		MPMX20_03950	0.22	-0.5
4,150,816	+		MPMX20_03950	0.22	-2.7
4,150,817	+		MPMX20_03950	0.23	-1.3
4,150,819	-		MPMX20_03950	0.23	+0.7
4,150,819	-		MPMX20_03950	0.23	-0.4
4,150,819	-		MPMX20_03950	0.23	-1.6
4,150,819	-		MPMX20_03950	0.23	-3.2
4,150,819	-		MPMX20_03950	0.23	+2.0
4,150,819	-		MPMX20_03950	0.23	+0.7
4,150,819	-		MPMX20_03950	0.23	-1.7
4,150,819	-		MPMX20_03950	0.23	-0.3
4,150,819	-		MPMX20_03950	0.23	-2.7
4,150,824	-		MPMX20_03950	0.23	-1.0
4,150,824	-		MPMX20_03950	0.23	-1.5
4,150,825	-		MPMX20_03950	0.23	+0.7
4,150,825	-		MPMX20_03950	0.23	+1.4
4,150,836	+		MPMX20_03950	0.24	-0.9
4,150,844	-		MPMX20_03950	0.25	-1.5
4,150,871	+		MPMX20_03950	0.28	-1.9
4,150,871	+		MPMX20_03950	0.28	-0.5
4,150,872	+		MPMX20_03950	0.28	-2.1
4,150,874	+		MPMX20_03950	0.28	-2.3
4,150,874	+		MPMX20_03950	0.28	-2.0
4,150,874	-		MPMX20_03950	0.28	+0.7
4,150,875	-		MPMX20_03950	0.28	-1.5
4,150,880	-		MPMX20_03950	0.29	-1.0
4,150,896	-		MPMX20_03950	0.30	-0.7
4,150,898	+		MPMX20_03950	0.30	-4.2
4,150,939	+		MPMX20_03950	0.34	-1.4
4,150,939	+		MPMX20_03950	0.34	+0.3
4,150,947	+		MPMX20_03950	0.35	-3.3
4,150,962	+		MPMX20_03950	0.37	-2.4
4,150,971	+		MPMX20_03950	0.38	-0.7
4,150,971	+		MPMX20_03950	0.38	-1.7
4,150,972	+		MPMX20_03950	0.38	-3.6
4,150,972	+		MPMX20_03950	0.38	-0.1
4,150,977	+		MPMX20_03950	0.38	+0.2
4,150,977	+		MPMX20_03950	0.38	-1.3
4,150,985	-		MPMX20_03950	0.39	+0.6
4,150,985	-		MPMX20_03950	0.39	+1.0
4,150,990	+		MPMX20_03950	0.39	+1.8
4,150,991	+		MPMX20_03950	0.39	-1.8
4,150,998	-		MPMX20_03950	0.40	-1.4
4,151,002	+		MPMX20_03950	0.41	-0.5
4,151,002	+		MPMX20_03950	0.41	+0.7
4,151,017	+		MPMX20_03950	0.42	+0.0
4,151,019	+		MPMX20_03950	0.42	-3.1
4,151,029	-		MPMX20_03950	0.43	-1.0
4,151,031	+		MPMX20_03950	0.43	+1.3
4,151,036	+		MPMX20_03950	0.44	-0.3
4,151,036	+		MPMX20_03950	0.44	-0.7
4,151,036	+		MPMX20_03950	0.44	-0.5
4,151,087	+		MPMX20_03950	0.49	-1.2
4,151,095	-		MPMX20_03950	0.50	-2.0
4,151,096	+		MPMX20_03950	0.50	-0.7
4,151,106	+		MPMX20_03950	0.51	-0.4
4,151,106	+		MPMX20_03950	0.51	-1.3
4,151,106	+		MPMX20_03950	0.51	+1.3
4,151,106	+		MPMX20_03950	0.51	+1.7
4,151,106	+		MPMX20_03950	0.51	-2.0
4,151,119	+		MPMX20_03950	0.52	-2.8
4,151,139	+		MPMX20_03950	0.54	-1.8
4,151,139	+		MPMX20_03950	0.54	-1.3
4,151,139	+		MPMX20_03950	0.54	-2.8
4,151,139	+		MPMX20_03950	0.54	+0.7
4,151,139	+		MPMX20_03950	0.54	-2.8
4,151,140	+		MPMX20_03950	0.54	-3.4
4,151,146	-		MPMX20_03950	0.55	+2.2
4,151,175	+		MPMX20_03950	0.57	+2.0
4,151,189	+		MPMX20_03950	0.59	-0.3
4,151,189	+		MPMX20_03950	0.59	+0.5
4,151,189	+		MPMX20_03950	0.59	-0.5
4,151,189	+		MPMX20_03950	0.59	-2.3
4,151,197	-		MPMX20_03950	0.59	-2.7
4,151,206	+		MPMX20_03950	0.60	+1.9
4,151,212	+		MPMX20_03950	0.61	+0.1
4,151,212	+		MPMX20_03950	0.61	-1.0
4,151,212	+		MPMX20_03950	0.61	+0.3
4,151,212	+		MPMX20_03950	0.61	+0.3
4,151,212	+		MPMX20_03950	0.61	-1.4
4,151,212	+		MPMX20_03950	0.61	+0.2
4,151,217	+		MPMX20_03950	0.61	+0.7
4,151,217	+		MPMX20_03950	0.61	-2.3
4,151,217	+		MPMX20_03950	0.61	-1.3
4,151,223	+		MPMX20_03950	0.62	-2.8
4,151,281	+		MPMX20_03950	0.68	-1.1
4,151,297	+		MPMX20_03950	0.69	-1.5
4,151,302	+		MPMX20_03950	0.70	+0.7
4,151,302	+		MPMX20_03950	0.70	-2.1
4,151,302	+		MPMX20_03950	0.70	-0.6
4,151,302	+		MPMX20_03950	0.70	-1.1
4,151,302	+		MPMX20_03950	0.70	+1.3
4,151,334	+		MPMX20_03950	0.73	+0.4
4,151,385	+		MPMX20_03950	0.78	-2.0
4,151,392	+		MPMX20_03950	0.78	-3.4
4,151,392	+		MPMX20_03950	0.78	-0.3
4,151,392	+		MPMX20_03950	0.78	+1.7
4,151,407	+		MPMX20_03950	0.80	-3.0
4,151,407	+		MPMX20_03950	0.80	+3.1
4,151,407	+		MPMX20_03950	0.80	-1.0
4,151,407	+		MPMX20_03950	0.80	+0.7
4,151,407	+		MPMX20_03950	0.80	-1.8
4,151,407	+		MPMX20_03950	0.80	+1.7
4,151,408	+		MPMX20_03950	0.80	+0.5
4,151,409	+		MPMX20_03950	0.80	+0.0
4,151,472	+		MPMX20_03950	0.86	-2.1
4,151,521	+				-1.1
4,151,521	+				-1.0
4,151,521	+				-0.9
4,151,521	+				+0.3
4,151,562	+				-0.8
4,151,564	+				-0.8
4,151,646	+				+1.2
4,152,219	-		MPMX20_03951	0.85	-1.9
4,152,219	-		MPMX20_03951	0.85	-0.1
4,152,219	-		MPMX20_03951	0.85	-2.4
4,152,219	-		MPMX20_03951	0.85	+0.4
4,152,224	-		MPMX20_03951	0.86	-1.0
4,152,233	-		MPMX20_03951	0.87	+0.7
4,152,233	-		MPMX20_03951	0.87	-4.4
4,152,233	-		MPMX20_03951	0.87	-3.4
4,152,280	-				+0.4
4,152,280	-				-1.1
4,152,280	-				+0.8
4,152,290	-				+1.1
4,152,290	-				+0.8
4,152,290	-				-1.2
4,152,290	-				+0.5
4,152,290	-				-0.5
4,152,290	-				-0.3
4,152,290	-				+0.2
4,152,290	-				-2.7
4,152,290	-				+1.4
4,152,291	-				+0.9
4,152,291	-				-0.1
4,152,309	-				-2.4
4,152,316	+				-1.5
4,152,317	-				-2.2
4,152,317	-				-0.5
4,152,317	-				-2.8
4,152,317	-				+0.3
4,152,317	-				+0.3
4,152,318	-				-1.1
4,152,318	-				+3.8
4,152,318	-				+0.3
4,152,322	+				-1.8
4,152,323	+				-1.0
4,152,323	+				-1.8
4,152,323	+				-0.8
4,152,323	+				+0.2
4,152,323	+				+0.0
4,152,323	+				-3.1
4,152,323	+				-1.4
4,152,328	+				-3.9
4,152,330	-				-1.6
4,152,330	-				+0.5
4,152,330	-				+1.0
4,152,330	-				-2.1
4,152,330	-				+0.3
4,152,330	-				-0.1
4,152,331	-				+2.2
4,152,331	-				+0.1
4,152,331	-				-3.7
4,152,331	-				-0.3
4,152,331	-				-0.2
4,152,331	-				+1.2
4,152,331	-				+0.8
4,152,331	-				+0.2
4,152,331	-				+2.6
4,152,331	-				-0.3
4,152,331	-				-1.5
4,152,331	-				+1.9
4,152,331	-				-3.6
4,152,331	-				-0.9
4,152,331	-				-0.3
4,152,331	-				-1.3
4,152,331	-				-0.1
4,152,331	-				-0.0
4,152,331	-				-0.4
4,152,331	-				-0.6
4,152,331	-				+0.2
4,152,331	-				-0.3
4,152,331	-				-0.4
4,152,331	-				-2.7
4,152,331	-				+2.5
4,152,331	-				+0.3
4,152,331	-				+0.8
4,152,331	-				-0.1
4,152,336	-				-1.9
4,152,336	-				-0.7
4,152,346	+				-3.3
4,152,348	+				+0.2
4,152,349	-				-3.2
4,152,354	-				-1.4
4,152,354	-				-3.2
4,152,355	+				+1.1
4,152,356	-				+2.9
4,152,356	-				+0.7
4,152,361	-				-0.3
4,152,363	-				-3.8
4,152,363	-				+0.2
4,152,363	-				-1.5
4,152,398	-				+0.2
4,152,440	-				+0.4
4,152,465	+				-2.2
4,152,473	-				+2.5
4,152,474	-				+0.6
4,152,519	-				+0.1
4,152,567	-				-0.9
4,152,575	+				+0.1
4,152,575	-				-0.9
4,152,583	-				-2.0
4,152,601	-		MPMX20_03952	0.10	-1.6
4,152,606	-		MPMX20_03952	0.12	+0.3
4,152,611	+		MPMX20_03952	0.13	+0.7
4,152,636	+		MPMX20_03952	0.22	+0.6
4,152,643	+		MPMX20_03952	0.24	-1.0
4,152,643	+		MPMX20_03952	0.24	+0.4
4,152,662	+		MPMX20_03952	0.31	+1.0
4,152,665	-		MPMX20_03952	0.32	+1.7
4,152,665	-		MPMX20_03952	0.32	-0.2
4,152,670	+		MPMX20_03952	0.33	+0.3
4,152,670	+		MPMX20_03952	0.33	+0.0
4,152,670	+		MPMX20_03952	0.33	-0.5
4,152,670	-		MPMX20_03952	0.33	+0.8
4,152,672	+		MPMX20_03952	0.34	+1.6
4,152,678	-		MPMX20_03952	0.36	+1.2
4,152,678	-		MPMX20_03952	0.36	-2.1
4,152,678	-		MPMX20_03952	0.36	+0.2
4,152,678	-		MPMX20_03952	0.36	-2.1
4,152,678	-		MPMX20_03952	0.36	+0.9
4,152,680	+		MPMX20_03952	0.37	+1.9
4,152,688	-		MPMX20_03952	0.39	-1.2
4,152,695	-		MPMX20_03952	0.42	+0.4
4,152,717	+		MPMX20_03952	0.49	+0.0
4,152,885	+				-2.4
4,152,885	+				-2.3
4,152,888	-				+0.1
4,152,921	+				+0.8
4,152,942	+				-1.2
4,152,942	+				-0.3
4,152,957	+		MPMX20_03953	0.10	+1.1
4,152,967	+		MPMX20_03953	0.11	+1.1
4,152,967	+		MPMX20_03953	0.11	+1.4
4,152,983	-		MPMX20_03953	0.12	-1.8
4,152,988	-		MPMX20_03953	0.13	+0.1
4,153,078	+		MPMX20_03953	0.21	+1.6
4,153,083	+		MPMX20_03953	0.21	+2.7
4,153,113	+		MPMX20_03953	0.24	+0.2
4,153,114	-		MPMX20_03953	0.24	+0.3