Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04639

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04638 and MPMX20_04639 are separated by 321 nucleotidesMPMX20_04639 and MPMX20_04640 are separated by 80 nucleotides MPMX20_04638: MPMX20_04638 - Glutamine--fructose-6-phosphate aminotransferase [isomerizing], at 4,857,691 to 4,859,520 _04638 MPMX20_04639: MPMX20_04639 - Phosphate-binding protein PstS, at 4,859,842 to 4,860,882 _04639 MPMX20_04640: MPMX20_04640 - Phosphate transport system permease protein PstC, at 4,860,963 to 4,861,922 _04640 Position (kb) 4859 4860 4861Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 4859.529 kb on + strandat 4859.536 kb on + strandat 4859.559 kb on - strandat 4859.559 kb on - strandat 4859.632 kb on - strandat 4859.748 kb on + strandat 4859.748 kb on + strandat 4859.781 kb on + strandat 4859.794 kb on + strandat 4859.794 kb on + strandat 4859.802 kb on + strandat 4859.853 kb on + strandat 4859.931 kb on - strandat 4859.938 kb on + strandat 4859.938 kb on + strandat 4860.154 kb on + strand, within MPMX20_04639at 4860.212 kb on + strand, within MPMX20_04639at 4860.229 kb on - strand, within MPMX20_04639at 4860.491 kb on + strand, within MPMX20_04639at 4860.802 kb on - strandat 4860.825 kb on + strandat 4860.858 kb on - strandat 4861.163 kb on + strand, within MPMX20_04640at 4861.163 kb on + strand, within MPMX20_04640at 4861.254 kb on - strand, within MPMX20_04640at 4861.298 kb on + strand, within MPMX20_04640at 4861.364 kb on - strand, within MPMX20_04640at 4861.724 kb on + strand, within MPMX20_04640at 4861.834 kb on + strandat 4861.880 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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4,859,529 + -1.5
4,859,536 + -0.6
4,859,559 - +0.3
4,859,559 - -0.7
4,859,632 - -0.9
4,859,748 + -3.4
4,859,748 + +0.2
4,859,781 + +0.4
4,859,794 + -3.1
4,859,794 + -3.8
4,859,802 + +0.4
4,859,853 + -2.0
4,859,931 - +0.1
4,859,938 + -0.1
4,859,938 + +1.7
4,860,154 + MPMX20_04639 0.30 -0.2
4,860,212 + MPMX20_04639 0.36 -2.2
4,860,229 - MPMX20_04639 0.37 -0.2
4,860,491 + MPMX20_04639 0.62 +0.4
4,860,802 - -1.5
4,860,825 + +1.2
4,860,858 - +1.7
4,861,163 + MPMX20_04640 0.21 +2.5
4,861,163 + MPMX20_04640 0.21 -1.0
4,861,254 - MPMX20_04640 0.30 -1.5
4,861,298 + MPMX20_04640 0.35 +0.1
4,861,364 - MPMX20_04640 0.42 -0.6
4,861,724 + MPMX20_04640 0.79 -0.2
4,861,834 + +0.3
4,861,880 + -2.5

Or see this region's nucleotide sequence