Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03387 and MPMX20_03388 are separated by 65 nucleotides MPMX20_03388 and MPMX20_03389 are separated by 300 nucleotides
MPMX20_03387: MPMX20_03387 - hypothetical protein, at 3,565,936 to 3,566,970
_03387
MPMX20_03388: MPMX20_03388 - Di-/tripeptide transporter, at 3,567,036 to 3,568,577
_03388
MPMX20_03389: MPMX20_03389 - GTPase Der, at 3,568,878 to 3,570,350
_03389
Position (kb)
3567
3568
3569 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3566.038 kb on - strand at 3566.064 kb on + strand, within MPMX20_03387 at 3566.064 kb on + strand, within MPMX20_03387 at 3566.064 kb on + strand, within MPMX20_03387 at 3566.066 kb on + strand, within MPMX20_03387 at 3566.072 kb on - strand, within MPMX20_03387 at 3566.072 kb on - strand, within MPMX20_03387 at 3566.072 kb on - strand, within MPMX20_03387 at 3566.102 kb on - strand, within MPMX20_03387 at 3566.287 kb on + strand, within MPMX20_03387 at 3566.436 kb on - strand, within MPMX20_03387 at 3566.465 kb on - strand, within MPMX20_03387 at 3566.488 kb on + strand, within MPMX20_03387 at 3566.579 kb on + strand, within MPMX20_03387 at 3566.734 kb on + strand, within MPMX20_03387 at 3566.737 kb on - strand, within MPMX20_03387 at 3566.754 kb on + strand, within MPMX20_03387 at 3566.800 kb on - strand, within MPMX20_03387 at 3566.843 kb on + strand, within MPMX20_03387 at 3566.930 kb on + strand at 3567.052 kb on + strand at 3567.178 kb on + strand at 3567.178 kb on + strand at 3567.186 kb on - strand at 3567.203 kb on - strand, within MPMX20_03388 at 3567.211 kb on + strand, within MPMX20_03388 at 3567.229 kb on + strand, within MPMX20_03388 at 3567.252 kb on - strand, within MPMX20_03388 at 3567.387 kb on - strand, within MPMX20_03388 at 3567.566 kb on - strand, within MPMX20_03388 at 3567.567 kb on - strand, within MPMX20_03388 at 3567.601 kb on + strand, within MPMX20_03388 at 3567.609 kb on - strand, within MPMX20_03388 at 3567.652 kb on + strand, within MPMX20_03388 at 3567.688 kb on - strand, within MPMX20_03388 at 3567.690 kb on + strand, within MPMX20_03388 at 3567.698 kb on - strand, within MPMX20_03388 at 3567.792 kb on + strand, within MPMX20_03388 at 3567.844 kb on - strand, within MPMX20_03388 at 3567.856 kb on + strand, within MPMX20_03388 at 3567.912 kb on + strand, within MPMX20_03388 at 3567.984 kb on + strand, within MPMX20_03388 at 3567.996 kb on - strand, within MPMX20_03388 at 3568.025 kb on + strand, within MPMX20_03388 at 3568.050 kb on - strand, within MPMX20_03388 at 3568.177 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.185 kb on - strand, within MPMX20_03388 at 3568.187 kb on + strand, within MPMX20_03388 at 3568.195 kb on - strand, within MPMX20_03388 at 3568.195 kb on - strand, within MPMX20_03388 at 3568.283 kb on + strand, within MPMX20_03388 at 3568.291 kb on - strand, within MPMX20_03388 at 3568.301 kb on - strand, within MPMX20_03388 at 3568.366 kb on - strand, within MPMX20_03388 at 3568.433 kb on - strand at 3568.509 kb on - strand at 3568.592 kb on + strand at 3568.600 kb on - strand at 3568.600 kb on - strand at 3568.605 kb on - strand at 3568.719 kb on - strand at 3568.726 kb on - strand at 3568.763 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 3,566,038 - +1.3 3,566,064 + MPMX20_03387 0.12 +1.4 3,566,064 + MPMX20_03387 0.12 -1.9 3,566,064 + MPMX20_03387 0.12 +1.9 3,566,066 + MPMX20_03387 0.13 +1.1 3,566,072 - MPMX20_03387 0.13 -2.1 3,566,072 - MPMX20_03387 0.13 +2.2 3,566,072 - MPMX20_03387 0.13 +2.9 3,566,102 - MPMX20_03387 0.16 -1.3 3,566,287 + MPMX20_03387 0.34 +0.9 3,566,436 - MPMX20_03387 0.48 +1.4 3,566,465 - MPMX20_03387 0.51 -0.6 3,566,488 + MPMX20_03387 0.53 -0.4 3,566,579 + MPMX20_03387 0.62 -2.0 3,566,734 + MPMX20_03387 0.77 -1.2 3,566,737 - MPMX20_03387 0.77 -0.9 3,566,754 + MPMX20_03387 0.79 +0.5 3,566,800 - MPMX20_03387 0.83 +0.8 3,566,843 + MPMX20_03387 0.88 +0.9 3,566,930 + -3.3 3,567,052 + -2.1 3,567,178 + +2.0 3,567,178 + +0.4 3,567,186 - +0.7 3,567,203 - MPMX20_03388 0.11 -3.7 3,567,211 + MPMX20_03388 0.11 +1.8 3,567,229 + MPMX20_03388 0.13 -1.5 3,567,252 - MPMX20_03388 0.14 +1.2 3,567,387 - MPMX20_03388 0.23 -0.3 3,567,566 - MPMX20_03388 0.34 -2.5 3,567,567 - MPMX20_03388 0.34 +1.2 3,567,601 + MPMX20_03388 0.37 -0.5 3,567,609 - MPMX20_03388 0.37 +2.2 3,567,652 + MPMX20_03388 0.40 -3.8 3,567,688 - MPMX20_03388 0.42 +0.4 3,567,690 + MPMX20_03388 0.42 -1.2 3,567,698 - MPMX20_03388 0.43 -0.4 3,567,792 + MPMX20_03388 0.49 +1.0 3,567,844 - MPMX20_03388 0.52 +2.5 3,567,856 + MPMX20_03388 0.53 +1.0 3,567,912 + MPMX20_03388 0.57 +1.9 3,567,984 + MPMX20_03388 0.61 +1.6 3,567,996 - MPMX20_03388 0.62 +0.7 3,568,025 + MPMX20_03388 0.64 -0.9 3,568,050 - MPMX20_03388 0.66 +0.7 3,568,177 - MPMX20_03388 0.74 +0.8 3,568,185 - MPMX20_03388 0.75 -0.4 3,568,185 - MPMX20_03388 0.75 +2.0 3,568,185 - MPMX20_03388 0.75 -3.3 3,568,185 - MPMX20_03388 0.75 +1.7 3,568,185 - MPMX20_03388 0.75 +2.4 3,568,187 + MPMX20_03388 0.75 +1.1 3,568,195 - MPMX20_03388 0.75 +0.9 3,568,195 - MPMX20_03388 0.75 -0.1 3,568,283 + MPMX20_03388 0.81 -2.2 3,568,291 - MPMX20_03388 0.81 +1.8 3,568,301 - MPMX20_03388 0.82 +2.7 3,568,366 - MPMX20_03388 0.86 -2.9 3,568,433 - -1.3 3,568,509 - +0.5 3,568,592 + +0.4 3,568,600 - +0.0 3,568,600 - -1.5 3,568,605 - +0.9 3,568,719 - +1.2 3,568,726 - -0.4 3,568,763 + -1.2
Or see this region's nucleotide sequence