Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02732

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02730 and MPMX20_02731 are separated by 23 nucleotidesMPMX20_02731 and MPMX20_02732 are separated by 74 nucleotidesMPMX20_02732 and MPMX20_02733 are separated by 159 nucleotidesMPMX20_02733 and MPMX20_02734 are separated by 64 nucleotides MPMX20_02730: MPMX20_02730 - hypothetical protein, at 2,885,137 to 2,886,126 _02730 MPMX20_02731: MPMX20_02731 - hypothetical protein, at 2,886,150 to 2,886,440 _02731 MPMX20_02732: MPMX20_02732 - PhoP/PhoQ regulator MgrB, at 2,886,515 to 2,886,658 _02732 MPMX20_02733: MPMX20_02733 - hypothetical protein, at 2,886,818 to 2,887,057 _02733 MPMX20_02734: MPMX20_02734 - Transcriptional regulator KdgR, at 2,887,122 to 2,887,913 _02734 Position (kb) 2886 2887Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2885.515 kb on + strand, within MPMX20_02730at 2885.523 kb on - strand, within MPMX20_02730at 2885.523 kb on - strand, within MPMX20_02730at 2885.534 kb on + strand, within MPMX20_02730at 2885.534 kb on + strand, within MPMX20_02730at 2885.534 kb on + strand, within MPMX20_02730at 2885.542 kb on - strand, within MPMX20_02730at 2885.542 kb on - strand, within MPMX20_02730at 2885.542 kb on - strand, within MPMX20_02730at 2885.542 kb on - strand, within MPMX20_02730at 2885.555 kb on - strand, within MPMX20_02730at 2885.562 kb on + strand, within MPMX20_02730at 2885.562 kb on + strand, within MPMX20_02730at 2885.562 kb on + strand, within MPMX20_02730at 2885.570 kb on - strand, within MPMX20_02730at 2885.570 kb on - strand, within MPMX20_02730at 2885.579 kb on - strand, within MPMX20_02730at 2885.636 kb on - strand, within MPMX20_02730at 2885.659 kb on + strand, within MPMX20_02730at 2885.766 kb on + strand, within MPMX20_02730at 2885.820 kb on - strand, within MPMX20_02730at 2885.861 kb on - strand, within MPMX20_02730at 2885.861 kb on - strand, within MPMX20_02730at 2885.864 kb on - strand, within MPMX20_02730at 2885.925 kb on + strand, within MPMX20_02730at 2885.925 kb on + strand, within MPMX20_02730at 2886.106 kb on - strandat 2886.133 kb on + strandat 2886.190 kb on + strand, within MPMX20_02731at 2886.193 kb on - strand, within MPMX20_02731at 2886.252 kb on - strand, within MPMX20_02731at 2886.298 kb on + strand, within MPMX20_02731at 2886.298 kb on + strand, within MPMX20_02731at 2886.317 kb on + strand, within MPMX20_02731at 2886.416 kb on + strandat 2886.416 kb on + strandat 2886.416 kb on + strandat 2886.424 kb on - strandat 2886.438 kb on + strandat 2886.471 kb on + strandat 2886.591 kb on - strand, within MPMX20_02732at 2886.593 kb on - strand, within MPMX20_02732at 2886.604 kb on + strand, within MPMX20_02732at 2886.605 kb on - strand, within MPMX20_02732at 2886.612 kb on - strand, within MPMX20_02732at 2886.622 kb on - strand, within MPMX20_02732at 2886.642 kb on - strand, within MPMX20_02732at 2886.704 kb on + strandat 2886.712 kb on - strandat 2886.715 kb on + strandat 2886.726 kb on + strandat 2886.730 kb on - strandat 2886.730 kb on - strandat 2886.730 kb on - strandat 2886.757 kb on - strandat 2886.782 kb on + strandat 2886.782 kb on + strandat 2886.782 kb on + strandat 2886.790 kb on - strandat 2886.790 kb on - strandat 2886.790 kb on - strandat 2886.848 kb on - strand, within MPMX20_02733at 2886.863 kb on - strand, within MPMX20_02733at 2886.863 kb on - strand, within MPMX20_02733at 2886.869 kb on - strand, within MPMX20_02733at 2886.882 kb on + strand, within MPMX20_02733at 2886.890 kb on - strand, within MPMX20_02733at 2886.890 kb on - strand, within MPMX20_02733at 2886.955 kb on + strand, within MPMX20_02733at 2886.963 kb on - strand, within MPMX20_02733at 2886.963 kb on - strand, within MPMX20_02733at 2886.971 kb on + strand, within MPMX20_02733at 2887.014 kb on + strand, within MPMX20_02733at 2887.014 kb on + strand, within MPMX20_02733at 2887.022 kb on - strand, within MPMX20_02733at 2887.022 kb on - strand, within MPMX20_02733at 2887.027 kb on - strand, within MPMX20_02733at 2887.120 kb on + strandat 2887.128 kb on - strandat 2887.158 kb on + strandat 2887.171 kb on + strandat 2887.171 kb on + strandat 2887.194 kb on - strandat 2887.205 kb on - strand, within MPMX20_02734at 2887.259 kb on + strand, within MPMX20_02734at 2887.283 kb on + strand, within MPMX20_02734at 2887.291 kb on - strand, within MPMX20_02734at 2887.300 kb on + strand, within MPMX20_02734at 2887.301 kb on - strand, within MPMX20_02734at 2887.301 kb on - strand, within MPMX20_02734at 2887.306 kb on - strand, within MPMX20_02734at 2887.335 kb on - strand, within MPMX20_02734at 2887.387 kb on - strand, within MPMX20_02734at 2887.391 kb on + strand, within MPMX20_02734at 2887.396 kb on + strand, within MPMX20_02734at 2887.399 kb on - strand, within MPMX20_02734at 2887.399 kb on - strand, within MPMX20_02734at 2887.399 kb on - strand, within MPMX20_02734at 2887.410 kb on - strand, within MPMX20_02734at 2887.418 kb on - strand, within MPMX20_02734at 2887.436 kb on - strand, within MPMX20_02734at 2887.478 kb on + strand, within MPMX20_02734at 2887.492 kb on + strand, within MPMX20_02734at 2887.493 kb on + strand, within MPMX20_02734at 2887.501 kb on - strand, within MPMX20_02734at 2887.551 kb on + strand, within MPMX20_02734at 2887.559 kb on - strand, within MPMX20_02734at 2887.564 kb on - strand, within MPMX20_02734at 2887.569 kb on - strand, within MPMX20_02734at 2887.603 kb on - strand, within MPMX20_02734at 2887.607 kb on + strand, within MPMX20_02734at 2887.622 kb on - strand, within MPMX20_02734at 2887.631 kb on + strand, within MPMX20_02734

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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2,885,515 + MPMX20_02730 0.38 -2.2
2,885,523 - MPMX20_02730 0.39 +1.4
2,885,523 - MPMX20_02730 0.39 -2.2
2,885,534 + MPMX20_02730 0.40 +1.9
2,885,534 + MPMX20_02730 0.40 -1.2
2,885,534 + MPMX20_02730 0.40 -0.1
2,885,542 - MPMX20_02730 0.41 +0.4
2,885,542 - MPMX20_02730 0.41 +0.3
2,885,542 - MPMX20_02730 0.41 -1.3
2,885,542 - MPMX20_02730 0.41 +2.2
2,885,555 - MPMX20_02730 0.42 +0.6
2,885,562 + MPMX20_02730 0.43 +0.6
2,885,562 + MPMX20_02730 0.43 +1.1
2,885,562 + MPMX20_02730 0.43 +1.8
2,885,570 - MPMX20_02730 0.44 -2.9
2,885,570 - MPMX20_02730 0.44 +2.7
2,885,579 - MPMX20_02730 0.45 +3.2
2,885,636 - MPMX20_02730 0.50 -4.2
2,885,659 + MPMX20_02730 0.53 +0.6
2,885,766 + MPMX20_02730 0.64 +1.0
2,885,820 - MPMX20_02730 0.69 -2.7
2,885,861 - MPMX20_02730 0.73 +1.7
2,885,861 - MPMX20_02730 0.73 +0.8
2,885,864 - MPMX20_02730 0.73 +0.3
2,885,925 + MPMX20_02730 0.80 +1.2
2,885,925 + MPMX20_02730 0.80 -0.4
2,886,106 - -0.7
2,886,133 + -1.6
2,886,190 + MPMX20_02731 0.14 -3.9
2,886,193 - MPMX20_02731 0.15 +1.0
2,886,252 - MPMX20_02731 0.35 +0.7
2,886,298 + MPMX20_02731 0.51 -0.2
2,886,298 + MPMX20_02731 0.51 -0.5
2,886,317 + MPMX20_02731 0.57 +0.7
2,886,416 + -2.1
2,886,416 + -0.6
2,886,416 + -0.1
2,886,424 - -3.0
2,886,438 + +2.8
2,886,471 + -3.7
2,886,591 - MPMX20_02732 0.53 -3.0
2,886,593 - MPMX20_02732 0.54 -0.0
2,886,604 + MPMX20_02732 0.62 -1.2
2,886,605 - MPMX20_02732 0.62 -0.2
2,886,612 - MPMX20_02732 0.67 -0.6
2,886,622 - MPMX20_02732 0.74 -1.2
2,886,642 - MPMX20_02732 0.88 -2.6
2,886,704 + +2.1
2,886,712 - +0.9
2,886,715 + -3.4
2,886,726 + +0.2
2,886,730 - -0.5
2,886,730 - -0.8
2,886,730 - +1.5
2,886,757 - +1.2
2,886,782 + +1.9
2,886,782 + -2.7
2,886,782 + +0.3
2,886,790 - -3.3
2,886,790 - -2.8
2,886,790 - +1.3
2,886,848 - MPMX20_02733 0.12 +0.2
2,886,863 - MPMX20_02733 0.19 -0.4
2,886,863 - MPMX20_02733 0.19 -1.0
2,886,869 - MPMX20_02733 0.21 +2.4
2,886,882 + MPMX20_02733 0.27 -0.6
2,886,890 - MPMX20_02733 0.30 -0.1
2,886,890 - MPMX20_02733 0.30 -0.7
2,886,955 + MPMX20_02733 0.57 +1.9
2,886,963 - MPMX20_02733 0.60 -1.3
2,886,963 - MPMX20_02733 0.60 +0.8
2,886,971 + MPMX20_02733 0.64 +1.1
2,887,014 + MPMX20_02733 0.82 -1.3
2,887,014 + MPMX20_02733 0.82 -3.3
2,887,022 - MPMX20_02733 0.85 -0.1
2,887,022 - MPMX20_02733 0.85 +0.9
2,887,027 - MPMX20_02733 0.87 +0.8
2,887,120 + -1.9
2,887,128 - +1.1
2,887,158 + -1.1
2,887,171 + -2.7
2,887,171 + -1.4
2,887,194 - +0.1
2,887,205 - MPMX20_02734 0.10 +0.0
2,887,259 + MPMX20_02734 0.17 +1.1
2,887,283 + MPMX20_02734 0.20 -0.1
2,887,291 - MPMX20_02734 0.21 -1.0
2,887,300 + MPMX20_02734 0.22 +0.2
2,887,301 - MPMX20_02734 0.23 +1.7
2,887,301 - MPMX20_02734 0.23 -0.7
2,887,306 - MPMX20_02734 0.23 -0.8
2,887,335 - MPMX20_02734 0.27 -0.5
2,887,387 - MPMX20_02734 0.33 +1.9
2,887,391 + MPMX20_02734 0.34 -1.2
2,887,396 + MPMX20_02734 0.35 -2.3
2,887,399 - MPMX20_02734 0.35 -1.2
2,887,399 - MPMX20_02734 0.35 +1.1
2,887,399 - MPMX20_02734 0.35 -1.0
2,887,410 - MPMX20_02734 0.36 -3.5
2,887,418 - MPMX20_02734 0.37 -2.4
2,887,436 - MPMX20_02734 0.40 -3.7
2,887,478 + MPMX20_02734 0.45 -0.1
2,887,492 + MPMX20_02734 0.47 -0.1
2,887,493 + MPMX20_02734 0.47 +0.1
2,887,501 - MPMX20_02734 0.48 -2.6
2,887,551 + MPMX20_02734 0.54 +0.2
2,887,559 - MPMX20_02734 0.55 -1.0
2,887,564 - MPMX20_02734 0.56 -3.4
2,887,569 - MPMX20_02734 0.56 +1.9
2,887,603 - MPMX20_02734 0.61 -1.4
2,887,607 + MPMX20_02734 0.61 +0.9
2,887,622 - MPMX20_02734 0.63 +0.7
2,887,631 + MPMX20_02734 0.64 -2.4

Or see this region's nucleotide sequence