Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02380 and MPMX20_02381 are separated by 630 nucleotides MPMX20_02381 and MPMX20_02382 are separated by 79 nucleotides MPMX20_02382 and MPMX20_02383 are separated by 38 nucleotides
MPMX20_02380: MPMX20_02380 - Aromatic amino acid exporter YddG, at 2,509,403 to 2,510,281
_02380
MPMX20_02381: MPMX20_02381 - Outer membrane porin protein OmpD, at 2,510,912 to 2,511,985
_02381
MPMX20_02382: MPMX20_02382 - hypothetical protein, at 2,512,065 to 2,512,523
_02382
MPMX20_02383: MPMX20_02383 - Methyl viologen resistance protein SmvA, at 2,512,562 to 2,514,049
_02383
Position (kb)
2510
2511
2512 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2509.913 kb on + strand, within MPMX20_02380 at 2509.921 kb on - strand, within MPMX20_02380 at 2509.923 kb on - strand, within MPMX20_02380 at 2509.923 kb on - strand, within MPMX20_02380 at 2509.956 kb on + strand, within MPMX20_02380 at 2510.009 kb on - strand, within MPMX20_02380 at 2510.030 kb on + strand, within MPMX20_02380 at 2510.030 kb on + strand, within MPMX20_02380 at 2510.037 kb on + strand, within MPMX20_02380 at 2510.037 kb on + strand, within MPMX20_02380 at 2510.049 kb on + strand, within MPMX20_02380 at 2510.060 kb on + strand, within MPMX20_02380 at 2510.068 kb on - strand, within MPMX20_02380 at 2510.070 kb on + strand, within MPMX20_02380 at 2510.075 kb on + strand, within MPMX20_02380 at 2510.081 kb on + strand, within MPMX20_02380 at 2510.083 kb on - strand, within MPMX20_02380 at 2510.106 kb on + strand, within MPMX20_02380 at 2510.114 kb on + strand, within MPMX20_02380 at 2510.125 kb on + strand, within MPMX20_02380 at 2510.125 kb on + strand, within MPMX20_02380 at 2510.133 kb on - strand, within MPMX20_02380 at 2510.141 kb on + strand, within MPMX20_02380 at 2510.142 kb on - strand, within MPMX20_02380 at 2510.157 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.159 kb on + strand, within MPMX20_02380 at 2510.160 kb on - strand, within MPMX20_02380 at 2510.162 kb on + strand, within MPMX20_02380 at 2510.164 kb on + strand, within MPMX20_02380 at 2510.164 kb on + strand, within MPMX20_02380 at 2510.164 kb on + strand, within MPMX20_02380 at 2510.164 kb on + strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.167 kb on - strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.169 kb on + strand, within MPMX20_02380 at 2510.175 kb on - strand, within MPMX20_02380 at 2510.177 kb on - strand, within MPMX20_02380 at 2510.177 kb on - strand, within MPMX20_02380 at 2510.194 kb on - strand at 2510.199 kb on - strand at 2510.229 kb on + strand at 2510.229 kb on + strand at 2510.229 kb on + strand at 2510.229 kb on + strand at 2510.229 kb on + strand at 2510.229 kb on + strand at 2510.236 kb on + strand at 2510.244 kb on - strand at 2510.244 kb on - strand at 2510.246 kb on + strand at 2510.247 kb on + strand at 2510.247 kb on + strand at 2510.247 kb on + strand at 2510.255 kb on - strand at 2510.255 kb on - strand at 2510.257 kb on + strand at 2510.259 kb on + strand at 2510.291 kb on + strand at 2510.294 kb on + strand at 2510.299 kb on - strand at 2510.402 kb on - strand at 2510.459 kb on - strand at 2510.459 kb on - strand at 2510.501 kb on + strand at 2510.509 kb on - strand at 2510.539 kb on + strand at 2510.547 kb on - strand at 2510.547 kb on - strand at 2510.547 kb on - strand at 2510.703 kb on + strand at 2510.708 kb on + strand at 2510.717 kb on + strand at 2510.840 kb on + strand at 2510.862 kb on + strand at 2510.884 kb on - strand at 2510.943 kb on + strand at 2510.943 kb on + strand at 2510.943 kb on + strand at 2510.950 kb on - strand at 2510.950 kb on - strand at 2510.950 kb on - strand at 2510.950 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.951 kb on - strand at 2510.981 kb on - strand at 2511.001 kb on - strand at 2511.003 kb on + strand at 2511.003 kb on - strand at 2511.019 kb on - strand at 2511.029 kb on + strand, within MPMX20_02381 at 2511.030 kb on - strand, within MPMX20_02381 at 2511.032 kb on - strand, within MPMX20_02381 at 2511.032 kb on - strand, within MPMX20_02381 at 2511.034 kb on + strand, within MPMX20_02381 at 2511.076 kb on - strand, within MPMX20_02381 at 2511.129 kb on - strand, within MPMX20_02381 at 2511.136 kb on - strand, within MPMX20_02381 at 2511.173 kb on + strand, within MPMX20_02381 at 2511.288 kb on + strand, within MPMX20_02381 at 2511.319 kb on + strand, within MPMX20_02381 at 2511.321 kb on + strand, within MPMX20_02381 at 2511.327 kb on - strand, within MPMX20_02381 at 2511.340 kb on + strand, within MPMX20_02381 at 2511.415 kb on - strand, within MPMX20_02381 at 2511.420 kb on - strand, within MPMX20_02381 at 2511.422 kb on + strand, within MPMX20_02381 at 2511.430 kb on - strand, within MPMX20_02381 at 2511.435 kb on - strand, within MPMX20_02381 at 2511.477 kb on + strand, within MPMX20_02381 at 2511.477 kb on + strand, within MPMX20_02381 at 2511.487 kb on + strand, within MPMX20_02381 at 2511.495 kb on - strand, within MPMX20_02381 at 2511.495 kb on - strand, within MPMX20_02381 at 2511.519 kb on - strand, within MPMX20_02381 at 2511.529 kb on - strand, within MPMX20_02381 at 2511.585 kb on - strand, within MPMX20_02381 at 2511.612 kb on - strand, within MPMX20_02381 at 2511.646 kb on + strand, within MPMX20_02381 at 2511.668 kb on - strand, within MPMX20_02381 at 2511.721 kb on - strand, within MPMX20_02381 at 2511.729 kb on - strand, within MPMX20_02381 at 2511.735 kb on + strand, within MPMX20_02381 at 2511.791 kb on + strand, within MPMX20_02381 at 2511.859 kb on - strand, within MPMX20_02381 at 2511.871 kb on + strand, within MPMX20_02381 at 2512.089 kb on - strand at 2512.096 kb on + strand at 2512.145 kb on + strand, within MPMX20_02382 at 2512.147 kb on + strand, within MPMX20_02382 at 2512.147 kb on + strand, within MPMX20_02382 at 2512.147 kb on + strand, within MPMX20_02382 at 2512.211 kb on - strand, within MPMX20_02382 at 2512.234 kb on - strand, within MPMX20_02382 at 2512.311 kb on + strand, within MPMX20_02382 at 2512.355 kb on + strand, within MPMX20_02382 at 2512.398 kb on + strand, within MPMX20_02382 at 2512.526 kb on - strand at 2512.634 kb on + strand at 2512.634 kb on + strand at 2512.634 kb on + strand at 2512.634 kb on + strand at 2512.634 kb on + strand at 2512.634 kb on + strand at 2512.634 kb on + strand at 2512.642 kb on - strand at 2512.642 kb on - strand at 2512.642 kb on - strand at 2512.657 kb on - strand at 2512.699 kb on + strand at 2512.699 kb on + strand at 2512.707 kb on - strand at 2512.718 kb on - strand, within MPMX20_02383 at 2512.841 kb on + strand, within MPMX20_02383 at 2512.849 kb on - strand, within MPMX20_02383 at 2512.858 kb on + strand, within MPMX20_02383 at 2512.858 kb on + strand, within MPMX20_02383 at 2512.858 kb on + strand, within MPMX20_02383 at 2512.859 kb on - strand, within MPMX20_02383 at 2512.866 kb on - strand, within MPMX20_02383 at 2512.931 kb on + strand, within MPMX20_02383
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 2,509,913 + MPMX20_02380 0.58 -0.3 2,509,921 - MPMX20_02380 0.59 -0.7 2,509,923 - MPMX20_02380 0.59 -0.4 2,509,923 - MPMX20_02380 0.59 -2.4 2,509,956 + MPMX20_02380 0.63 -2.5 2,510,009 - MPMX20_02380 0.69 -0.7 2,510,030 + MPMX20_02380 0.71 +0.4 2,510,030 + MPMX20_02380 0.71 -3.9 2,510,037 + MPMX20_02380 0.72 -2.0 2,510,037 + MPMX20_02380 0.72 -2.8 2,510,049 + MPMX20_02380 0.73 -4.5 2,510,060 + MPMX20_02380 0.75 -0.3 2,510,068 - MPMX20_02380 0.76 -0.4 2,510,070 + MPMX20_02380 0.76 -3.3 2,510,075 + MPMX20_02380 0.76 +0.2 2,510,081 + MPMX20_02380 0.77 -1.9 2,510,083 - MPMX20_02380 0.77 -1.5 2,510,106 + MPMX20_02380 0.80 +1.0 2,510,114 + MPMX20_02380 0.81 +0.2 2,510,125 + MPMX20_02380 0.82 -1.9 2,510,125 + MPMX20_02380 0.82 +1.3 2,510,133 - MPMX20_02380 0.83 -2.6 2,510,141 + MPMX20_02380 0.84 +0.0 2,510,142 - MPMX20_02380 0.84 -2.3 2,510,157 + MPMX20_02380 0.86 +0.3 2,510,159 + MPMX20_02380 0.86 -1.9 2,510,159 + MPMX20_02380 0.86 -0.9 2,510,159 + MPMX20_02380 0.86 +1.4 2,510,159 + MPMX20_02380 0.86 -3.0 2,510,159 + MPMX20_02380 0.86 -1.9 2,510,159 + MPMX20_02380 0.86 -1.5 2,510,159 + MPMX20_02380 0.86 -0.4 2,510,159 + MPMX20_02380 0.86 +2.0 2,510,159 + MPMX20_02380 0.86 +1.5 2,510,159 + MPMX20_02380 0.86 +1.0 2,510,159 + MPMX20_02380 0.86 +1.5 2,510,159 + MPMX20_02380 0.86 -1.1 2,510,159 + MPMX20_02380 0.86 -3.9 2,510,159 + MPMX20_02380 0.86 +1.4 2,510,159 + MPMX20_02380 0.86 +1.3 2,510,159 + MPMX20_02380 0.86 +4.1 2,510,159 + MPMX20_02380 0.86 +0.7 2,510,159 + MPMX20_02380 0.86 +1.3 2,510,159 + MPMX20_02380 0.86 -2.3 2,510,159 + MPMX20_02380 0.86 -3.3 2,510,159 + MPMX20_02380 0.86 +1.5 2,510,159 + MPMX20_02380 0.86 +0.1 2,510,159 + MPMX20_02380 0.86 -0.3 2,510,159 + MPMX20_02380 0.86 -1.7 2,510,159 + MPMX20_02380 0.86 +1.1 2,510,159 + MPMX20_02380 0.86 -2.9 2,510,160 - MPMX20_02380 0.86 +0.2 2,510,162 + MPMX20_02380 0.86 -2.7 2,510,164 + MPMX20_02380 0.87 +1.4 2,510,164 + MPMX20_02380 0.87 +0.9 2,510,164 + MPMX20_02380 0.87 -0.7 2,510,164 + MPMX20_02380 0.87 -0.1 2,510,167 - MPMX20_02380 0.87 -0.8 2,510,167 - MPMX20_02380 0.87 -2.4 2,510,167 - MPMX20_02380 0.87 +0.2 2,510,167 - MPMX20_02380 0.87 +0.3 2,510,167 - MPMX20_02380 0.87 +1.1 2,510,167 - MPMX20_02380 0.87 -1.7 2,510,167 - MPMX20_02380 0.87 +0.7 2,510,167 - MPMX20_02380 0.87 +1.3 2,510,167 - MPMX20_02380 0.87 +0.5 2,510,169 + MPMX20_02380 0.87 -1.9 2,510,169 + MPMX20_02380 0.87 +1.4 2,510,169 + MPMX20_02380 0.87 -3.4 2,510,169 + MPMX20_02380 0.87 +1.1 2,510,169 + MPMX20_02380 0.87 -2.2 2,510,169 + MPMX20_02380 0.87 -1.7 2,510,169 + MPMX20_02380 0.87 +0.3 2,510,175 - MPMX20_02380 0.88 +1.7 2,510,177 - MPMX20_02380 0.88 +1.0 2,510,177 - MPMX20_02380 0.88 -0.7 2,510,194 - -0.3 2,510,199 - +0.7 2,510,229 + +2.0 2,510,229 + +2.4 2,510,229 + +0.3 2,510,229 + -0.4 2,510,229 + +1.1 2,510,229 + +3.0 2,510,236 + +0.6 2,510,244 - +1.8 2,510,244 - -3.6 2,510,246 + +0.3 2,510,247 + +2.6 2,510,247 + -0.7 2,510,247 + +1.4 2,510,255 - -0.3 2,510,255 - +3.0 2,510,257 + -1.7 2,510,259 + -1.5 2,510,291 + +0.4 2,510,294 + -0.8 2,510,299 - -1.1 2,510,402 - +0.4 2,510,459 - +0.2 2,510,459 - +0.3 2,510,501 + -1.7 2,510,509 - -2.5 2,510,539 + +0.6 2,510,547 - +1.1 2,510,547 - -0.1 2,510,547 - +1.8 2,510,703 + -2.6 2,510,708 + +2.4 2,510,717 + +0.9 2,510,840 + +0.6 2,510,862 + -3.5 2,510,884 - -1.0 2,510,943 + +1.4 2,510,943 + -2.3 2,510,943 + -3.2 2,510,950 - -2.4 2,510,950 - -0.1 2,510,950 - -2.1 2,510,950 - +0.9 2,510,951 - -1.7 2,510,951 - -3.6 2,510,951 - -2.9 2,510,951 - -1.1 2,510,951 - +0.1 2,510,951 - +1.1 2,510,951 - +0.0 2,510,951 - +1.1 2,510,951 - -1.8 2,510,981 - +1.3 2,511,001 - -1.0 2,511,003 + +0.8 2,511,003 - -1.5 2,511,019 - -1.5 2,511,029 + MPMX20_02381 0.11 +0.9 2,511,030 - MPMX20_02381 0.11 -0.9 2,511,032 - MPMX20_02381 0.11 +0.8 2,511,032 - MPMX20_02381 0.11 +0.3 2,511,034 + MPMX20_02381 0.11 -0.4 2,511,076 - MPMX20_02381 0.15 -1.9 2,511,129 - MPMX20_02381 0.20 -3.7 2,511,136 - MPMX20_02381 0.21 -0.2 2,511,173 + MPMX20_02381 0.24 +1.3 2,511,288 + MPMX20_02381 0.35 +1.1 2,511,319 + MPMX20_02381 0.38 +2.5 2,511,321 + MPMX20_02381 0.38 -1.4 2,511,327 - MPMX20_02381 0.39 -4.3 2,511,340 + MPMX20_02381 0.40 -1.3 2,511,415 - MPMX20_02381 0.47 +0.4 2,511,420 - MPMX20_02381 0.47 -0.5 2,511,422 + MPMX20_02381 0.47 +0.2 2,511,430 - MPMX20_02381 0.48 -0.7 2,511,435 - MPMX20_02381 0.49 -0.6 2,511,477 + MPMX20_02381 0.53 -1.9 2,511,477 + MPMX20_02381 0.53 -3.6 2,511,487 + MPMX20_02381 0.54 +0.9 2,511,495 - MPMX20_02381 0.54 -1.1 2,511,495 - MPMX20_02381 0.54 +0.5 2,511,519 - MPMX20_02381 0.57 -3.5 2,511,529 - MPMX20_02381 0.57 -2.6 2,511,585 - MPMX20_02381 0.63 +1.3 2,511,612 - MPMX20_02381 0.65 -2.2 2,511,646 + MPMX20_02381 0.68 +0.3 2,511,668 - MPMX20_02381 0.70 -1.3 2,511,721 - MPMX20_02381 0.75 -3.8 2,511,729 - MPMX20_02381 0.76 -2.5 2,511,735 + MPMX20_02381 0.77 -1.2 2,511,791 + MPMX20_02381 0.82 -2.8 2,511,859 - MPMX20_02381 0.88 +0.3 2,511,871 + MPMX20_02381 0.89 -1.7 2,512,089 - -1.1 2,512,096 + -0.7 2,512,145 + MPMX20_02382 0.17 -2.2 2,512,147 + MPMX20_02382 0.18 -1.8 2,512,147 + MPMX20_02382 0.18 -3.8 2,512,147 + MPMX20_02382 0.18 -0.9 2,512,211 - MPMX20_02382 0.32 -1.3 2,512,234 - MPMX20_02382 0.37 -4.1 2,512,311 + MPMX20_02382 0.54 +0.1 2,512,355 + MPMX20_02382 0.63 -3.6 2,512,398 + MPMX20_02382 0.73 +1.0 2,512,526 - -1.3 2,512,634 + -0.4 2,512,634 + +0.9 2,512,634 + +0.3 2,512,634 + +0.2 2,512,634 + +0.1 2,512,634 + +1.5 2,512,634 + -1.9 2,512,642 - +1.5 2,512,642 - +0.4 2,512,642 - +0.9 2,512,657 - -1.9 2,512,699 + +3.0 2,512,699 + -0.4 2,512,707 - +1.5 2,512,718 - MPMX20_02383 0.10 -0.3 2,512,841 + MPMX20_02383 0.19 -0.1 2,512,849 - MPMX20_02383 0.19 +0.2 2,512,858 + MPMX20_02383 0.20 +0.6 2,512,858 + MPMX20_02383 0.20 -2.2 2,512,858 + MPMX20_02383 0.20 -0.7 2,512,859 - MPMX20_02383 0.20 -1.4 2,512,866 - MPMX20_02383 0.20 +0.3 2,512,931 + MPMX20_02383 0.25 +0.3
Or see this region's nucleotide sequence