Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01544 and MPMX20_01545 are separated by 371 nucleotides MPMX20_01545 and MPMX20_01546 are separated by 70 nucleotides MPMX20_01546 and MPMX20_01547 are separated by 284 nucleotides
MPMX20_01544: MPMX20_01544 - ATP-dependent Clp protease ATP-binding subunit ClpA, at 1,615,348 to 1,617,627
_01544
MPMX20_01545: MPMX20_01545 - hypothetical protein, at 1,617,999 to 1,618,445
_01545
MPMX20_01546: MPMX20_01546 - Translation initiation factor IF-1, at 1,618,516 to 1,618,734
_01546
MPMX20_01547: MPMX20_01547 - Leucyl/phenylalanyl-tRNA--protein transferase, at 1,619,019 to 1,619,723
_01547
Position (kb)
1617
1618
1619 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1617.026 kb on + strand, within MPMX20_01544 at 1617.034 kb on - strand, within MPMX20_01544 at 1617.059 kb on + strand, within MPMX20_01544 at 1617.153 kb on + strand, within MPMX20_01544 at 1617.175 kb on - strand, within MPMX20_01544 at 1617.203 kb on + strand, within MPMX20_01544 at 1617.224 kb on - strand, within MPMX20_01544 at 1617.233 kb on + strand, within MPMX20_01544 at 1617.295 kb on - strand, within MPMX20_01544 at 1617.306 kb on + strand, within MPMX20_01544 at 1617.314 kb on - strand, within MPMX20_01544 at 1617.314 kb on - strand, within MPMX20_01544 at 1617.430 kb on + strand at 1617.438 kb on - strand at 1617.453 kb on - strand at 1617.541 kb on - strand at 1617.548 kb on - strand at 1617.576 kb on + strand at 1617.603 kb on + strand at 1617.609 kb on + strand at 1617.810 kb on - strand at 1617.815 kb on + strand at 1617.849 kb on + strand at 1617.851 kb on + strand at 1617.857 kb on - strand at 1617.913 kb on - strand at 1617.989 kb on + strand at 1618.025 kb on + strand at 1618.049 kb on - strand, within MPMX20_01545 at 1618.152 kb on - strand, within MPMX20_01545 at 1618.286 kb on + strand, within MPMX20_01545 at 1618.335 kb on + strand, within MPMX20_01545 at 1618.353 kb on + strand, within MPMX20_01545 at 1618.399 kb on + strand, within MPMX20_01545 at 1618.404 kb on + strand at 1618.404 kb on + strand at 1618.409 kb on + strand at 1618.409 kb on + strand at 1618.412 kb on - strand at 1618.419 kb on + strand at 1618.420 kb on + strand at 1618.434 kb on + strand at 1618.439 kb on + strand at 1618.439 kb on + strand at 1618.439 kb on + strand at 1618.439 kb on + strand at 1618.439 kb on + strand at 1618.439 kb on + strand at 1618.447 kb on - strand at 1618.447 kb on - strand at 1618.467 kb on + strand at 1618.472 kb on + strand at 1618.472 kb on + strand at 1618.472 kb on + strand at 1618.475 kb on - strand at 1618.480 kb on - strand at 1618.860 kb on + strand at 1618.860 kb on + strand at 1618.860 kb on + strand at 1618.860 kb on + strand at 1618.868 kb on - strand at 1618.868 kb on - strand at 1618.868 kb on - strand at 1618.868 kb on - strand at 1618.894 kb on + strand at 1618.902 kb on - strand at 1618.902 kb on - strand at 1618.902 kb on - strand at 1618.904 kb on + strand at 1618.912 kb on - strand at 1618.919 kb on - strand at 1618.938 kb on + strand at 1618.968 kb on - strand at 1618.973 kb on - strand at 1618.973 kb on - strand at 1618.973 kb on - strand at 1619.140 kb on + strand, within MPMX20_01547 at 1619.140 kb on + strand, within MPMX20_01547 at 1619.148 kb on - strand, within MPMX20_01547 at 1619.268 kb on - strand, within MPMX20_01547 at 1619.287 kb on + strand, within MPMX20_01547 at 1619.292 kb on - strand, within MPMX20_01547 at 1619.324 kb on + strand, within MPMX20_01547 at 1619.324 kb on + strand, within MPMX20_01547 at 1619.324 kb on + strand, within MPMX20_01547 at 1619.326 kb on + strand, within MPMX20_01547 at 1619.326 kb on + strand, within MPMX20_01547 at 1619.332 kb on - strand, within MPMX20_01547 at 1619.411 kb on + strand, within MPMX20_01547 at 1619.421 kb on + strand, within MPMX20_01547 at 1619.425 kb on + strand, within MPMX20_01547 at 1619.429 kb on - strand, within MPMX20_01547 at 1619.429 kb on - strand, within MPMX20_01547
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 1,617,026 + MPMX20_01544 0.74 +0.4 1,617,034 - MPMX20_01544 0.74 -2.7 1,617,059 + MPMX20_01544 0.75 +2.6 1,617,153 + MPMX20_01544 0.79 +0.1 1,617,175 - MPMX20_01544 0.80 -2.2 1,617,203 + MPMX20_01544 0.81 -3.0 1,617,224 - MPMX20_01544 0.82 -1.1 1,617,233 + MPMX20_01544 0.83 -1.5 1,617,295 - MPMX20_01544 0.85 -1.0 1,617,306 + MPMX20_01544 0.86 +0.4 1,617,314 - MPMX20_01544 0.86 -3.8 1,617,314 - MPMX20_01544 0.86 +0.7 1,617,430 + -2.4 1,617,438 - -2.3 1,617,453 - -2.3 1,617,541 - -2.3 1,617,548 - +1.0 1,617,576 + -0.5 1,617,603 + -3.9 1,617,609 + +1.3 1,617,810 - -0.9 1,617,815 + -1.3 1,617,849 + -2.4 1,617,851 + -0.7 1,617,857 - -2.7 1,617,913 - -0.7 1,617,989 + -0.9 1,618,025 + +1.3 1,618,049 - MPMX20_01545 0.11 +0.1 1,618,152 - MPMX20_01545 0.34 -0.2 1,618,286 + MPMX20_01545 0.64 -1.9 1,618,335 + MPMX20_01545 0.75 -1.8 1,618,353 + MPMX20_01545 0.79 -0.1 1,618,399 + MPMX20_01545 0.89 -2.5 1,618,404 + -1.5 1,618,404 + +1.2 1,618,409 + -2.9 1,618,409 + +0.5 1,618,412 - +1.2 1,618,419 + +3.5 1,618,420 + -2.0 1,618,434 + -1.5 1,618,439 + -1.7 1,618,439 + +1.1 1,618,439 + +1.3 1,618,439 + +1.2 1,618,439 + -2.8 1,618,439 + -2.1 1,618,447 - -3.2 1,618,447 - +1.4 1,618,467 + -2.6 1,618,472 + +1.4 1,618,472 + +0.9 1,618,472 + +1.7 1,618,475 - +0.9 1,618,480 - -2.9 1,618,860 + -0.3 1,618,860 + +2.5 1,618,860 + -0.1 1,618,860 + -0.6 1,618,868 - +0.4 1,618,868 - -0.3 1,618,868 - -2.9 1,618,868 - -2.6 1,618,894 + +1.8 1,618,902 - +0.8 1,618,902 - -0.9 1,618,902 - +2.3 1,618,904 + -3.1 1,618,912 - -3.3 1,618,919 - -3.0 1,618,938 + -1.1 1,618,968 - +0.8 1,618,973 - +1.3 1,618,973 - -1.3 1,618,973 - +0.1 1,619,140 + MPMX20_01547 0.17 +0.5 1,619,140 + MPMX20_01547 0.17 -3.1 1,619,148 - MPMX20_01547 0.18 -1.6 1,619,268 - MPMX20_01547 0.35 +1.8 1,619,287 + MPMX20_01547 0.38 -0.3 1,619,292 - MPMX20_01547 0.39 +0.9 1,619,324 + MPMX20_01547 0.43 -0.0 1,619,324 + MPMX20_01547 0.43 +1.0 1,619,324 + MPMX20_01547 0.43 -2.6 1,619,326 + MPMX20_01547 0.44 +0.2 1,619,326 + MPMX20_01547 0.44 -0.6 1,619,332 - MPMX20_01547 0.44 -0.6 1,619,411 + MPMX20_01547 0.56 +0.4 1,619,421 + MPMX20_01547 0.57 -1.8 1,619,425 + MPMX20_01547 0.58 -0.1 1,619,429 - MPMX20_01547 0.58 +3.1 1,619,429 - MPMX20_01547 0.58 -1.3
Or see this region's nucleotide sequence