Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01185

Experiment: L-Fucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01184 and MPMX20_01185 are separated by 116 nucleotidesMPMX20_01185 and MPMX20_01186 are separated by 175 nucleotidesMPMX20_01186 and MPMX20_01187 overlap by 4 nucleotides MPMX20_01184: MPMX20_01184 - hypothetical protein, at 1,244,386 to 1,247,403 _01184 MPMX20_01185: MPMX20_01185 - hypothetical protein, at 1,247,520 to 1,247,834 _01185 MPMX20_01186: MPMX20_01186 - Transcriptional activator protein ExaE, at 1,248,010 to 1,248,642 _01186 MPMX20_01187: MPMX20_01187 - Sensor histidine kinase RcsC, at 1,248,639 to 1,250,426 _01187 Position (kb) 1247 1248Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1246.587 kb on + strand, within MPMX20_01184at 1246.595 kb on - strand, within MPMX20_01184at 1246.595 kb on - strand, within MPMX20_01184at 1246.595 kb on - strand, within MPMX20_01184at 1246.595 kb on - strand, within MPMX20_01184at 1246.614 kb on - strand, within MPMX20_01184at 1246.682 kb on - strand, within MPMX20_01184at 1246.713 kb on + strand, within MPMX20_01184at 1246.847 kb on + strand, within MPMX20_01184at 1246.849 kb on + strand, within MPMX20_01184at 1246.855 kb on - strand, within MPMX20_01184at 1246.896 kb on + strand, within MPMX20_01184at 1246.896 kb on + strand, within MPMX20_01184at 1246.904 kb on - strand, within MPMX20_01184at 1246.937 kb on - strand, within MPMX20_01184at 1246.995 kb on + strand, within MPMX20_01184at 1246.995 kb on + strand, within MPMX20_01184at 1247.000 kb on + strand, within MPMX20_01184at 1247.003 kb on - strand, within MPMX20_01184at 1247.005 kb on + strand, within MPMX20_01184at 1247.005 kb on + strand, within MPMX20_01184at 1247.040 kb on + strand, within MPMX20_01184at 1247.040 kb on + strand, within MPMX20_01184at 1247.040 kb on + strand, within MPMX20_01184at 1247.048 kb on - strand, within MPMX20_01184at 1247.054 kb on - strand, within MPMX20_01184at 1247.055 kb on - strand, within MPMX20_01184at 1247.084 kb on + strand, within MPMX20_01184at 1247.084 kb on + strand, within MPMX20_01184at 1247.084 kb on + strand, within MPMX20_01184at 1247.086 kb on + strand, within MPMX20_01184at 1247.091 kb on + strand, within MPMX20_01184at 1247.091 kb on + strand, within MPMX20_01184at 1247.092 kb on - strand, within MPMX20_01184at 1247.092 kb on - strand, within MPMX20_01184at 1247.096 kb on + strand, within MPMX20_01184at 1247.138 kb on + strandat 1247.140 kb on + strandat 1247.146 kb on - strandat 1247.146 kb on - strandat 1247.154 kb on - strandat 1247.164 kb on - strandat 1247.164 kb on - strandat 1247.164 kb on - strandat 1247.192 kb on + strandat 1247.192 kb on + strandat 1247.192 kb on + strandat 1247.200 kb on + strandat 1247.200 kb on + strandat 1247.202 kb on - strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.211 kb on + strandat 1247.219 kb on - strandat 1247.219 kb on - strandat 1247.219 kb on - strandat 1247.219 kb on - strandat 1247.219 kb on - strandat 1247.219 kb on - strandat 1247.222 kb on + strandat 1247.223 kb on + strandat 1247.249 kb on - strandat 1247.304 kb on + strandat 1247.306 kb on + strandat 1247.306 kb on + strandat 1247.309 kb on + strandat 1247.309 kb on + strandat 1247.314 kb on - strandat 1247.320 kb on + strandat 1247.330 kb on + strandat 1247.330 kb on + strandat 1247.333 kb on + strandat 1247.351 kb on + strandat 1247.351 kb on + strandat 1247.354 kb on + strandat 1247.361 kb on + strandat 1247.364 kb on + strandat 1247.364 kb on + strandat 1247.364 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.366 kb on + strandat 1247.373 kb on + strandat 1247.373 kb on + strandat 1247.373 kb on + strandat 1247.373 kb on + strandat 1247.387 kb on + strandat 1247.387 kb on + strandat 1247.388 kb on + strandat 1247.388 kb on + strandat 1247.388 kb on + strandat 1247.388 kb on + strandat 1247.388 kb on + strandat 1247.388 kb on + strandat 1247.405 kb on + strandat 1247.409 kb on + strandat 1247.409 kb on + strandat 1247.409 kb on + strandat 1247.409 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.410 kb on + strandat 1247.413 kb on - strandat 1247.420 kb on + strandat 1247.420 kb on + strandat 1247.420 kb on + strandat 1247.420 kb on + strandat 1247.424 kb on + strandat 1247.424 kb on + strandat 1247.457 kb on + strandat 1247.501 kb on + strandat 1247.547 kb on + strandat 1247.547 kb on + strandat 1247.547 kb on + strandat 1247.548 kb on - strandat 1247.548 kb on - strandat 1247.548 kb on - strandat 1247.548 kb on - strandat 1247.548 kb on - strandat 1247.548 kb on - strandat 1247.548 kb on - strandat 1247.554 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.555 kb on - strand, within MPMX20_01185at 1247.602 kb on - strand, within MPMX20_01185at 1247.673 kb on - strand, within MPMX20_01185at 1247.680 kb on - strand, within MPMX20_01185at 1247.704 kb on - strand, within MPMX20_01185at 1247.745 kb on - strand, within MPMX20_01185at 1247.796 kb on + strand, within MPMX20_01185at 1247.801 kb on + strand, within MPMX20_01185at 1247.801 kb on + strand, within MPMX20_01185at 1247.801 kb on + strand, within MPMX20_01185at 1247.808 kb on + strandat 1247.945 kb on - strandat 1247.958 kb on - strandat 1247.977 kb on - strandat 1247.982 kb on - strandat 1247.984 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.001 kb on - strandat 1248.026 kb on - strandat 1248.038 kb on - strandat 1248.102 kb on + strand, within MPMX20_01186at 1248.102 kb on + strand, within MPMX20_01186at 1248.102 kb on + strand, within MPMX20_01186at 1248.102 kb on + strand, within MPMX20_01186at 1248.102 kb on + strand, within MPMX20_01186at 1248.110 kb on - strand, within MPMX20_01186at 1248.172 kb on - strand, within MPMX20_01186at 1248.231 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.236 kb on + strand, within MPMX20_01186at 1248.238 kb on + strand, within MPMX20_01186at 1248.238 kb on + strand, within MPMX20_01186at 1248.239 kb on - strand, within MPMX20_01186at 1248.239 kb on - strand, within MPMX20_01186at 1248.239 kb on - strand, within MPMX20_01186at 1248.243 kb on + strand, within MPMX20_01186at 1248.302 kb on + strand, within MPMX20_01186at 1248.303 kb on + strand, within MPMX20_01186at 1248.303 kb on + strand, within MPMX20_01186at 1248.310 kb on + strand, within MPMX20_01186at 1248.405 kb on + strand, within MPMX20_01186at 1248.407 kb on + strand, within MPMX20_01186at 1248.530 kb on - strand, within MPMX20_01186at 1248.550 kb on - strand, within MPMX20_01186at 1248.550 kb on - strand, within MPMX20_01186at 1248.568 kb on - strand, within MPMX20_01186at 1248.568 kb on - strand, within MPMX20_01186at 1248.596 kb on - strandat 1248.598 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.602 kb on - strandat 1248.610 kb on - strandat 1248.615 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.616 kb on - strandat 1248.620 kb on - strandat 1248.628 kb on - strandat 1248.631 kb on - strandat 1248.631 kb on - strandat 1248.665 kb on - strandat 1248.670 kb on + strandat 1248.670 kb on + strandat 1248.674 kb on + strandat 1248.674 kb on + strandat 1248.674 kb on + strandat 1248.674 kb on + strandat 1248.674 kb on + strandat 1248.674 kb on + strandat 1248.682 kb on - strandat 1248.682 kb on - strandat 1248.682 kb on - strandat 1248.728 kb on - strandat 1248.731 kb on - strandat 1248.731 kb on - strandat 1248.731 kb on - strandat 1248.731 kb on - strandat 1248.731 kb on - strandat 1248.731 kb on - strandat 1248.738 kb on - strandat 1248.739 kb on - strandat 1248.739 kb on - strandat 1248.768 kb on + strandat 1248.768 kb on + strandat 1248.768 kb on + strandat 1248.776 kb on - strandat 1248.776 kb on - strandat 1248.787 kb on + strandat 1248.790 kb on - strandat 1248.790 kb on - strandat 1248.797 kb on + strandat 1248.801 kb on - strandat 1248.804 kb on + strandat 1248.804 kb on + strandat 1248.805 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Fucose (C)
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1,246,587 + MPMX20_01184 0.73 -0.8
1,246,595 - MPMX20_01184 0.73 -0.8
1,246,595 - MPMX20_01184 0.73 +0.4
1,246,595 - MPMX20_01184 0.73 +0.9
1,246,595 - MPMX20_01184 0.73 +1.3
1,246,614 - MPMX20_01184 0.74 -3.4
1,246,682 - MPMX20_01184 0.76 +1.2
1,246,713 + MPMX20_01184 0.77 -2.9
1,246,847 + MPMX20_01184 0.82 +0.0
1,246,849 + MPMX20_01184 0.82 -0.5
1,246,855 - MPMX20_01184 0.82 +1.6
1,246,896 + MPMX20_01184 0.83 -0.0
1,246,896 + MPMX20_01184 0.83 +0.8
1,246,904 - MPMX20_01184 0.83 +0.4
1,246,937 - MPMX20_01184 0.85 -3.6
1,246,995 + MPMX20_01184 0.86 +0.2
1,246,995 + MPMX20_01184 0.86 -0.1
1,247,000 + MPMX20_01184 0.87 +0.9
1,247,003 - MPMX20_01184 0.87 -1.2
1,247,005 + MPMX20_01184 0.87 +1.7
1,247,005 + MPMX20_01184 0.87 +0.3
1,247,040 + MPMX20_01184 0.88 +1.2
1,247,040 + MPMX20_01184 0.88 -3.4
1,247,040 + MPMX20_01184 0.88 -0.2
1,247,048 - MPMX20_01184 0.88 -2.6
1,247,054 - MPMX20_01184 0.88 +0.0
1,247,055 - MPMX20_01184 0.88 +1.2
1,247,084 + MPMX20_01184 0.89 +2.0
1,247,084 + MPMX20_01184 0.89 +0.3
1,247,084 + MPMX20_01184 0.89 -3.8
1,247,086 + MPMX20_01184 0.89 -2.1
1,247,091 + MPMX20_01184 0.90 +1.0
1,247,091 + MPMX20_01184 0.90 +0.7
1,247,092 - MPMX20_01184 0.90 +2.2
1,247,092 - MPMX20_01184 0.90 -3.1
1,247,096 + MPMX20_01184 0.90 -1.9
1,247,138 + +2.2
1,247,140 + -1.3
1,247,146 - -3.2
1,247,146 - -1.0
1,247,154 - +0.8
1,247,164 - +0.3
1,247,164 - +0.5
1,247,164 - +1.3
1,247,192 + -0.4
1,247,192 + -2.6
1,247,192 + -1.1
1,247,200 + +2.2
1,247,200 + -3.0
1,247,202 - +0.1
1,247,211 + -1.8
1,247,211 + -3.4
1,247,211 + +0.6
1,247,211 + -0.3
1,247,211 + -0.8
1,247,211 + +1.0
1,247,211 + +0.5
1,247,211 + -3.5
1,247,211 + -4.1
1,247,211 + +0.7
1,247,211 + -1.3
1,247,211 + +0.3
1,247,211 + +2.3
1,247,211 + +1.0
1,247,219 - -2.4
1,247,219 - +0.7
1,247,219 - +1.8
1,247,219 - +0.2
1,247,219 - -2.0
1,247,219 - -2.3
1,247,222 + -0.8
1,247,223 + -2.1
1,247,249 - -1.3
1,247,304 + +0.1
1,247,306 + +1.4
1,247,306 + -2.8
1,247,309 + +0.2
1,247,309 + +1.7
1,247,314 - -1.1
1,247,320 + -2.3
1,247,330 + -1.0
1,247,330 + +1.2
1,247,333 + -0.7
1,247,351 + +2.5
1,247,351 + +0.2
1,247,354 + +1.0
1,247,361 + +0.2
1,247,364 + -0.3
1,247,364 + -1.8
1,247,364 + +0.4
1,247,366 + -0.5
1,247,366 + -0.8
1,247,366 + +1.5
1,247,366 + -3.7
1,247,366 + +0.5
1,247,366 + -1.4
1,247,366 + -2.5
1,247,366 + -2.9
1,247,373 + +2.7
1,247,373 + -0.1
1,247,373 + -0.6
1,247,373 + +0.9
1,247,387 + -3.6
1,247,387 + -1.0
1,247,388 + -1.0
1,247,388 + +1.9
1,247,388 + +0.9
1,247,388 + -0.3
1,247,388 + -1.7
1,247,388 + +1.7
1,247,405 + -3.2
1,247,409 + -2.8
1,247,409 + +0.7
1,247,409 + -0.5
1,247,409 + +0.3
1,247,410 + -0.1
1,247,410 + -2.4
1,247,410 + +1.3
1,247,410 + +1.0
1,247,410 + -2.0
1,247,410 + -0.3
1,247,410 + +0.1
1,247,410 + +1.0
1,247,410 + +1.2
1,247,410 + -0.5
1,247,410 + -0.4
1,247,410 + +0.5
1,247,413 - +1.2
1,247,420 + +1.5
1,247,420 + -1.7
1,247,420 + -1.1
1,247,420 + +0.8
1,247,424 + +0.1
1,247,424 + -0.3
1,247,457 + +0.2
1,247,501 + -2.3
1,247,547 + -2.1
1,247,547 + -1.7
1,247,547 + -2.3
1,247,548 - -1.4
1,247,548 - +0.2
1,247,548 - -3.9
1,247,548 - +1.6
1,247,548 - -0.8
1,247,548 - +0.9
1,247,548 - -2.4
1,247,554 - MPMX20_01185 0.11 -1.7
1,247,555 - MPMX20_01185 0.11 +0.5
1,247,555 - MPMX20_01185 0.11 -2.3
1,247,555 - MPMX20_01185 0.11 +0.6
1,247,555 - MPMX20_01185 0.11 -3.4
1,247,555 - MPMX20_01185 0.11 -1.0
1,247,555 - MPMX20_01185 0.11 -1.1
1,247,555 - MPMX20_01185 0.11 -4.1
1,247,555 - MPMX20_01185 0.11 -0.3
1,247,555 - MPMX20_01185 0.11 -2.2
1,247,602 - MPMX20_01185 0.26 +0.5
1,247,673 - MPMX20_01185 0.49 +2.0
1,247,680 - MPMX20_01185 0.51 -1.7
1,247,704 - MPMX20_01185 0.58 -0.3
1,247,745 - MPMX20_01185 0.71 -3.2
1,247,796 + MPMX20_01185 0.88 -0.3
1,247,801 + MPMX20_01185 0.89 +1.5
1,247,801 + MPMX20_01185 0.89 +0.0
1,247,801 + MPMX20_01185 0.89 -0.5
1,247,808 + -0.8
1,247,945 - -2.6
1,247,958 - -1.8
1,247,977 - -1.3
1,247,982 - +0.1
1,247,984 - -1.1
1,248,001 - -1.4
1,248,001 - -0.8
1,248,001 - +0.9
1,248,001 - -0.2
1,248,001 - -1.0
1,248,001 - -0.3
1,248,001 - -1.1
1,248,001 - -0.8
1,248,001 - -2.5
1,248,001 - +2.0
1,248,001 - -0.3
1,248,001 - +0.5
1,248,026 - +1.3
1,248,038 - +0.5
1,248,102 + MPMX20_01186 0.15 +1.6
1,248,102 + MPMX20_01186 0.15 +0.7
1,248,102 + MPMX20_01186 0.15 -0.3
1,248,102 + MPMX20_01186 0.15 -0.8
1,248,102 + MPMX20_01186 0.15 -1.0
1,248,110 - MPMX20_01186 0.16 -1.1
1,248,172 - MPMX20_01186 0.26 -1.3
1,248,231 + MPMX20_01186 0.35 +2.0
1,248,236 + MPMX20_01186 0.36 -0.1
1,248,236 + MPMX20_01186 0.36 +0.0
1,248,236 + MPMX20_01186 0.36 +3.5
1,248,236 + MPMX20_01186 0.36 -1.7
1,248,236 + MPMX20_01186 0.36 +1.1
1,248,236 + MPMX20_01186 0.36 -2.3
1,248,236 + MPMX20_01186 0.36 -0.8
1,248,236 + MPMX20_01186 0.36 -0.2
1,248,236 + MPMX20_01186 0.36 -1.7
1,248,238 + MPMX20_01186 0.36 -1.1
1,248,238 + MPMX20_01186 0.36 +0.5
1,248,239 - MPMX20_01186 0.36 +0.6
1,248,239 - MPMX20_01186 0.36 -1.0
1,248,239 - MPMX20_01186 0.36 -1.8
1,248,243 + MPMX20_01186 0.37 -2.5
1,248,302 + MPMX20_01186 0.46 +2.2
1,248,303 + MPMX20_01186 0.46 +1.3
1,248,303 + MPMX20_01186 0.46 -0.4
1,248,310 + MPMX20_01186 0.47 -2.8
1,248,405 + MPMX20_01186 0.62 +1.3
1,248,407 + MPMX20_01186 0.63 -1.8
1,248,530 - MPMX20_01186 0.82 -1.5
1,248,550 - MPMX20_01186 0.85 -0.3
1,248,550 - MPMX20_01186 0.85 -2.5
1,248,568 - MPMX20_01186 0.88 -0.1
1,248,568 - MPMX20_01186 0.88 -1.8
1,248,596 - +0.5
1,248,598 - -0.3
1,248,602 - -2.0
1,248,602 - -2.4
1,248,602 - +1.0
1,248,602 - -3.1
1,248,602 - +1.0
1,248,602 - -1.3
1,248,602 - -1.5
1,248,602 - +0.2
1,248,602 - +2.7
1,248,602 - -0.0
1,248,602 - +2.5
1,248,602 - -1.4
1,248,602 - -1.0
1,248,602 - -2.3
1,248,602 - +2.0
1,248,610 - +1.0
1,248,615 - +0.9
1,248,616 - +0.9
1,248,616 - -2.3
1,248,616 - +1.7
1,248,616 - -2.5
1,248,616 - -3.2
1,248,616 - -1.3
1,248,616 - +0.6
1,248,616 - -0.5
1,248,616 - -1.9
1,248,616 - -0.3
1,248,616 - -1.8
1,248,616 - -0.8
1,248,616 - +0.7
1,248,620 - -3.2
1,248,628 - +0.7
1,248,631 - -1.0
1,248,631 - +1.6
1,248,665 - -1.9
1,248,670 + -0.1
1,248,670 + +2.0
1,248,674 + +0.4
1,248,674 + -4.3
1,248,674 + -2.0
1,248,674 + +2.0
1,248,674 + -0.5
1,248,674 + +0.6
1,248,682 - -2.2
1,248,682 - -1.4
1,248,682 - -2.6
1,248,728 - +0.0
1,248,731 - -2.7
1,248,731 - +0.0
1,248,731 - +1.8
1,248,731 - +1.0
1,248,731 - +1.5
1,248,731 - -1.5
1,248,738 - +1.0
1,248,739 - -3.2
1,248,739 - +1.8
1,248,768 + -1.1
1,248,768 + -1.5
1,248,768 + +0.8
1,248,776 - -1.0
1,248,776 - -1.1
1,248,787 + -0.8
1,248,790 - +0.0
1,248,790 - +0.5
1,248,797 + -2.1
1,248,801 - -2.4
1,248,804 + +1.1
1,248,804 + -3.0
1,248,805 + +0.4

Or see this region's nucleotide sequence