Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00598

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00596 and MPMX20_00597 are separated by 199 nucleotidesMPMX20_00597 and MPMX20_00598 overlap by 15 nucleotidesMPMX20_00598 and MPMX20_00599 are separated by 185 nucleotides MPMX20_00596: MPMX20_00596 - Tryptophan--tRNA ligase 2, at 623,419 to 624,423 _00596 MPMX20_00597: MPMX20_00597 - Glutathione transferase FosA, at 624,623 to 625,048 _00597 MPMX20_00598: MPMX20_00598 - HTH-type transcriptional regulator DegA, at 625,034 to 626,041 _00598 MPMX20_00599: MPMX20_00599 - hypothetical protein, at 626,227 to 627,315 _00599 Position (kb) 625 626 627Strain fitness (log2 ratio) -2 -1 0 1 2 3at 624.054 kb on - strand, within MPMX20_00596at 624.061 kb on + strand, within MPMX20_00596at 624.070 kb on + strand, within MPMX20_00596at 624.099 kb on + strand, within MPMX20_00596at 624.226 kb on + strand, within MPMX20_00596at 624.234 kb on + strand, within MPMX20_00596at 624.242 kb on - strand, within MPMX20_00596at 624.242 kb on - strand, within MPMX20_00596at 624.242 kb on - strand, within MPMX20_00596at 624.341 kb on + strandat 624.394 kb on - strandat 624.417 kb on - strandat 624.418 kb on - strandat 624.513 kb on - strandat 624.537 kb on + strandat 624.562 kb on - strandat 624.592 kb on - strandat 624.641 kb on + strandat 624.641 kb on + strandat 624.697 kb on + strand, within MPMX20_00597at 624.729 kb on - strand, within MPMX20_00597at 624.813 kb on + strand, within MPMX20_00597at 624.813 kb on + strand, within MPMX20_00597at 624.813 kb on + strand, within MPMX20_00597at 624.870 kb on + strand, within MPMX20_00597at 624.870 kb on + strand, within MPMX20_00597at 624.870 kb on + strand, within MPMX20_00597at 624.894 kb on + strand, within MPMX20_00597at 624.904 kb on + strand, within MPMX20_00597at 624.904 kb on + strand, within MPMX20_00597at 624.912 kb on - strand, within MPMX20_00597at 624.912 kb on - strand, within MPMX20_00597at 624.948 kb on + strand, within MPMX20_00597at 624.948 kb on + strand, within MPMX20_00597at 624.952 kb on - strand, within MPMX20_00597at 624.954 kb on + strand, within MPMX20_00597at 624.962 kb on - strand, within MPMX20_00597at 624.962 kb on - strand, within MPMX20_00597at 624.962 kb on - strand, within MPMX20_00597at 624.962 kb on - strand, within MPMX20_00597at 624.962 kb on - strand, within MPMX20_00597at 624.983 kb on - strand, within MPMX20_00597at 625.004 kb on + strand, within MPMX20_00597at 625.040 kb on - strandat 625.057 kb on + strandat 625.065 kb on - strandat 625.083 kb on - strandat 625.112 kb on + strandat 625.158 kb on - strand, within MPMX20_00598at 625.168 kb on - strand, within MPMX20_00598at 625.172 kb on + strand, within MPMX20_00598at 625.188 kb on - strand, within MPMX20_00598at 625.301 kb on + strand, within MPMX20_00598at 625.367 kb on + strand, within MPMX20_00598at 625.402 kb on - strand, within MPMX20_00598at 625.408 kb on + strand, within MPMX20_00598at 625.408 kb on + strand, within MPMX20_00598at 625.416 kb on - strand, within MPMX20_00598at 625.416 kb on - strand, within MPMX20_00598at 625.416 kb on - strand, within MPMX20_00598at 625.472 kb on + strand, within MPMX20_00598at 625.508 kb on + strand, within MPMX20_00598at 625.510 kb on - strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.519 kb on + strand, within MPMX20_00598at 625.527 kb on - strand, within MPMX20_00598at 625.527 kb on - strand, within MPMX20_00598at 625.651 kb on + strand, within MPMX20_00598at 625.717 kb on + strand, within MPMX20_00598at 625.724 kb on - strand, within MPMX20_00598at 625.736 kb on + strand, within MPMX20_00598at 625.736 kb on + strand, within MPMX20_00598at 625.744 kb on - strand, within MPMX20_00598at 625.780 kb on - strand, within MPMX20_00598at 625.807 kb on + strand, within MPMX20_00598at 625.807 kb on + strand, within MPMX20_00598at 625.815 kb on - strand, within MPMX20_00598at 625.815 kb on - strand, within MPMX20_00598at 625.822 kb on - strand, within MPMX20_00598at 625.957 kb on + strandat 625.992 kb on + strandat 626.002 kb on + strandat 626.047 kb on - strandat 626.068 kb on + strandat 626.072 kb on + strandat 626.074 kb on + strandat 626.082 kb on - strandat 626.130 kb on - strandat 626.166 kb on - strandat 626.171 kb on - strandat 626.230 kb on + strandat 626.259 kb on + strandat 626.267 kb on - strandat 626.300 kb on + strandat 626.341 kb on + strand, within MPMX20_00599at 626.341 kb on + strand, within MPMX20_00599at 626.349 kb on - strand, within MPMX20_00599at 626.377 kb on - strand, within MPMX20_00599at 626.379 kb on + strand, within MPMX20_00599at 626.382 kb on - strand, within MPMX20_00599at 626.398 kb on + strand, within MPMX20_00599at 626.398 kb on + strand, within MPMX20_00599at 626.402 kb on + strand, within MPMX20_00599at 626.406 kb on - strand, within MPMX20_00599at 626.406 kb on - strand, within MPMX20_00599at 626.408 kb on - strand, within MPMX20_00599at 626.410 kb on - strand, within MPMX20_00599at 626.410 kb on - strand, within MPMX20_00599at 626.510 kb on + strand, within MPMX20_00599at 626.523 kb on - strand, within MPMX20_00599at 626.619 kb on - strand, within MPMX20_00599at 626.726 kb on - strand, within MPMX20_00599at 626.768 kb on + strand, within MPMX20_00599at 626.779 kb on + strand, within MPMX20_00599at 626.779 kb on + strand, within MPMX20_00599at 626.805 kb on - strand, within MPMX20_00599at 626.805 kb on - strand, within MPMX20_00599at 626.861 kb on - strand, within MPMX20_00599at 626.865 kb on + strand, within MPMX20_00599at 626.962 kb on + strand, within MPMX20_00599at 626.963 kb on - strand, within MPMX20_00599at 626.984 kb on - strand, within MPMX20_00599at 626.988 kb on + strand, within MPMX20_00599

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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624,054 - MPMX20_00596 0.63 +1.8
624,061 + MPMX20_00596 0.64 -1.1
624,070 + MPMX20_00596 0.65 +0.4
624,099 + MPMX20_00596 0.68 -0.6
624,226 + MPMX20_00596 0.80 +1.0
624,234 + MPMX20_00596 0.81 -0.8
624,242 - MPMX20_00596 0.82 -0.3
624,242 - MPMX20_00596 0.82 -0.0
624,242 - MPMX20_00596 0.82 +0.1
624,341 + +0.4
624,394 - -1.9
624,417 - +0.6
624,418 - -0.8
624,513 - -0.4
624,537 + -1.4
624,562 - +0.6
624,592 - -0.0
624,641 + -0.1
624,641 + +0.8
624,697 + MPMX20_00597 0.17 +0.3
624,729 - MPMX20_00597 0.25 -0.4
624,813 + MPMX20_00597 0.45 -0.9
624,813 + MPMX20_00597 0.45 +1.1
624,813 + MPMX20_00597 0.45 +0.6
624,870 + MPMX20_00597 0.58 +0.7
624,870 + MPMX20_00597 0.58 -0.3
624,870 + MPMX20_00597 0.58 +0.5
624,894 + MPMX20_00597 0.64 +1.8
624,904 + MPMX20_00597 0.66 -0.4
624,904 + MPMX20_00597 0.66 -0.0
624,912 - MPMX20_00597 0.68 -0.0
624,912 - MPMX20_00597 0.68 +1.1
624,948 + MPMX20_00597 0.76 +0.1
624,948 + MPMX20_00597 0.76 -0.4
624,952 - MPMX20_00597 0.77 -0.2
624,954 + MPMX20_00597 0.78 -1.1
624,962 - MPMX20_00597 0.80 +1.3
624,962 - MPMX20_00597 0.80 +1.8
624,962 - MPMX20_00597 0.80 +0.6
624,962 - MPMX20_00597 0.80 -0.5
624,962 - MPMX20_00597 0.80 +2.3
624,983 - MPMX20_00597 0.85 -0.7
625,004 + MPMX20_00597 0.89 +0.0
625,040 - -0.6
625,057 + +2.2
625,065 - +2.5
625,083 - +2.7
625,112 + +1.7
625,158 - MPMX20_00598 0.12 +2.0
625,168 - MPMX20_00598 0.13 +2.8
625,172 + MPMX20_00598 0.14 +2.7
625,188 - MPMX20_00598 0.15 +1.4
625,301 + MPMX20_00598 0.26 +2.3
625,367 + MPMX20_00598 0.33 +1.8
625,402 - MPMX20_00598 0.37 +2.1
625,408 + MPMX20_00598 0.37 +2.8
625,408 + MPMX20_00598 0.37 +1.9
625,416 - MPMX20_00598 0.38 +1.6
625,416 - MPMX20_00598 0.38 +1.9
625,416 - MPMX20_00598 0.38 +2.4
625,472 + MPMX20_00598 0.43 +0.8
625,508 + MPMX20_00598 0.47 +3.0
625,510 - MPMX20_00598 0.47 +2.9
625,519 + MPMX20_00598 0.48 +1.8
625,519 + MPMX20_00598 0.48 +2.5
625,519 + MPMX20_00598 0.48 +0.9
625,519 + MPMX20_00598 0.48 +1.4
625,527 - MPMX20_00598 0.49 +1.8
625,527 - MPMX20_00598 0.49 +0.8
625,651 + MPMX20_00598 0.61 +2.6
625,717 + MPMX20_00598 0.68 +1.0
625,724 - MPMX20_00598 0.68 +1.8
625,736 + MPMX20_00598 0.70 +2.5
625,736 + MPMX20_00598 0.70 +2.7
625,744 - MPMX20_00598 0.70 -0.1
625,780 - MPMX20_00598 0.74 +2.3
625,807 + MPMX20_00598 0.77 +2.6
625,807 + MPMX20_00598 0.77 +0.4
625,815 - MPMX20_00598 0.77 +2.6
625,815 - MPMX20_00598 0.77 +2.1
625,822 - MPMX20_00598 0.78 +2.2
625,957 + +2.1
625,992 + +1.5
626,002 + +2.1
626,047 - +0.8
626,068 + +0.4
626,072 + +0.5
626,074 + +0.5
626,082 - +0.5
626,130 - +0.2
626,166 - -0.7
626,171 - -0.6
626,230 + -1.2
626,259 + +0.4
626,267 - -2.7
626,300 + +0.7
626,341 + MPMX20_00599 0.10 -1.1
626,341 + MPMX20_00599 0.10 -0.3
626,349 - MPMX20_00599 0.11 +0.8
626,377 - MPMX20_00599 0.14 +0.2
626,379 + MPMX20_00599 0.14 +0.9
626,382 - MPMX20_00599 0.14 -0.7
626,398 + MPMX20_00599 0.16 -1.4
626,398 + MPMX20_00599 0.16 +1.3
626,402 + MPMX20_00599 0.16 -0.2
626,406 - MPMX20_00599 0.16 +0.1
626,406 - MPMX20_00599 0.16 -0.0
626,408 - MPMX20_00599 0.17 +0.1
626,410 - MPMX20_00599 0.17 -0.7
626,410 - MPMX20_00599 0.17 -2.1
626,510 + MPMX20_00599 0.26 +0.1
626,523 - MPMX20_00599 0.27 +0.4
626,619 - MPMX20_00599 0.36 +1.8
626,726 - MPMX20_00599 0.46 +0.3
626,768 + MPMX20_00599 0.50 -0.8
626,779 + MPMX20_00599 0.51 +0.4
626,779 + MPMX20_00599 0.51 -0.4
626,805 - MPMX20_00599 0.53 +0.2
626,805 - MPMX20_00599 0.53 -0.7
626,861 - MPMX20_00599 0.58 -0.1
626,865 + MPMX20_00599 0.59 -0.0
626,962 + MPMX20_00599 0.67 +2.2
626,963 - MPMX20_00599 0.68 -2.6
626,984 - MPMX20_00599 0.70 +0.2
626,988 + MPMX20_00599 0.70 -2.4

Or see this region's nucleotide sequence