Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04393

Experiment: D-Xylose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04392 and MPMX20_04393 are separated by 145 nucleotidesMPMX20_04393 and MPMX20_04394 are separated by 54 nucleotidesMPMX20_04394 and MPMX20_04395 are separated by 283 nucleotides MPMX20_04392: MPMX20_04392 - hypothetical protein, at 4,582,322 to 4,583,602 _04392 MPMX20_04393: MPMX20_04393 - Low-affinity inorganic phosphate transporter 1, at 4,583,748 to 4,585,247 _04393 MPMX20_04394: MPMX20_04394 - Universal stress protein B, at 4,585,302 to 4,585,637 _04394 MPMX20_04395: MPMX20_04395 - Universal stress protein A, at 4,585,921 to 4,586,358 _04395 Position (kb) 4583 4584 4585 4586Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4582.751 kb on - strand, within MPMX20_04392at 4582.867 kb on - strand, within MPMX20_04392at 4582.869 kb on + strand, within MPMX20_04392at 4582.874 kb on - strand, within MPMX20_04392at 4582.902 kb on + strand, within MPMX20_04392at 4582.923 kb on + strand, within MPMX20_04392at 4582.931 kb on - strand, within MPMX20_04392at 4582.931 kb on - strand, within MPMX20_04392at 4582.956 kb on - strand, within MPMX20_04392at 4583.008 kb on - strand, within MPMX20_04392at 4583.016 kb on - strand, within MPMX20_04392at 4583.021 kb on - strand, within MPMX20_04392at 4583.035 kb on + strand, within MPMX20_04392at 4583.043 kb on - strand, within MPMX20_04392at 4583.094 kb on + strand, within MPMX20_04392at 4583.094 kb on + strand, within MPMX20_04392at 4583.094 kb on + strand, within MPMX20_04392at 4583.094 kb on + strand, within MPMX20_04392at 4583.094 kb on + strand, within MPMX20_04392at 4583.102 kb on - strand, within MPMX20_04392at 4583.102 kb on - strand, within MPMX20_04392at 4583.102 kb on - strand, within MPMX20_04392at 4583.102 kb on - strand, within MPMX20_04392at 4583.107 kb on - strand, within MPMX20_04392at 4583.208 kb on + strand, within MPMX20_04392at 4583.266 kb on + strand, within MPMX20_04392at 4583.379 kb on + strand, within MPMX20_04392at 4583.423 kb on - strand, within MPMX20_04392at 4583.477 kb on - strandat 4583.502 kb on + strandat 4583.510 kb on - strandat 4583.510 kb on - strandat 4583.567 kb on + strandat 4583.567 kb on + strandat 4583.575 kb on - strandat 4583.580 kb on - strandat 4583.699 kb on + strandat 4583.716 kb on + strandat 4583.716 kb on + strandat 4583.724 kb on - strandat 4583.724 kb on - strandat 4583.810 kb on - strandat 4583.819 kb on + strandat 4583.960 kb on - strand, within MPMX20_04393at 4584.013 kb on + strand, within MPMX20_04393at 4584.030 kb on + strand, within MPMX20_04393at 4584.048 kb on - strand, within MPMX20_04393at 4584.191 kb on - strand, within MPMX20_04393at 4584.251 kb on - strand, within MPMX20_04393at 4584.444 kb on - strand, within MPMX20_04393at 4584.445 kb on + strand, within MPMX20_04393at 4584.536 kb on + strand, within MPMX20_04393at 4584.585 kb on - strand, within MPMX20_04393at 4584.585 kb on - strand, within MPMX20_04393at 4584.604 kb on + strand, within MPMX20_04393at 4584.612 kb on - strand, within MPMX20_04393at 4584.614 kb on + strand, within MPMX20_04393at 4584.614 kb on + strand, within MPMX20_04393at 4584.701 kb on + strand, within MPMX20_04393at 4584.709 kb on - strand, within MPMX20_04393at 4584.772 kb on + strand, within MPMX20_04393at 4584.780 kb on - strand, within MPMX20_04393at 4584.780 kb on - strand, within MPMX20_04393at 4584.780 kb on - strand, within MPMX20_04393at 4584.952 kb on + strand, within MPMX20_04393at 4585.003 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.013 kb on + strand, within MPMX20_04393at 4585.021 kb on - strand, within MPMX20_04393at 4585.021 kb on - strand, within MPMX20_04393at 4585.028 kb on + strand, within MPMX20_04393at 4585.048 kb on - strand, within MPMX20_04393at 4585.049 kb on - strand, within MPMX20_04393at 4585.087 kb on + strand, within MPMX20_04393at 4585.105 kb on - strandat 4585.322 kb on - strandat 4585.332 kb on + strandat 4585.335 kb on - strandat 4585.340 kb on - strand, within MPMX20_04394at 4585.345 kb on - strand, within MPMX20_04394at 4585.350 kb on - strand, within MPMX20_04394at 4585.359 kb on + strand, within MPMX20_04394at 4585.367 kb on - strand, within MPMX20_04394at 4585.423 kb on + strand, within MPMX20_04394at 4585.431 kb on - strand, within MPMX20_04394at 4585.440 kb on + strand, within MPMX20_04394at 4585.448 kb on - strand, within MPMX20_04394at 4585.475 kb on + strand, within MPMX20_04394at 4585.494 kb on - strand, within MPMX20_04394at 4585.504 kb on + strand, within MPMX20_04394at 4585.547 kb on - strand, within MPMX20_04394at 4585.547 kb on - strand, within MPMX20_04394at 4585.551 kb on - strand, within MPMX20_04394at 4585.658 kb on - strandat 4585.671 kb on + strandat 4585.671 kb on + strandat 4585.679 kb on - strandat 4585.687 kb on + strandat 4585.687 kb on + strandat 4585.687 kb on + strandat 4585.689 kb on + strandat 4585.697 kb on - strandat 4585.697 kb on - strandat 4585.774 kb on + strandat 4585.774 kb on + strandat 4585.782 kb on - strandat 4585.782 kb on - strandat 4585.782 kb on - strandat 4585.806 kb on + strandat 4585.806 kb on + strandat 4585.806 kb on + strandat 4585.830 kb on - strandat 4585.864 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.911 kb on + strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.919 kb on - strandat 4585.975 kb on - strand, within MPMX20_04395at 4585.975 kb on - strand, within MPMX20_04395at 4585.975 kb on - strand, within MPMX20_04395at 4586.004 kb on + strand, within MPMX20_04395at 4586.004 kb on + strand, within MPMX20_04395at 4586.055 kb on + strand, within MPMX20_04395at 4586.055 kb on + strand, within MPMX20_04395at 4586.060 kb on + strand, within MPMX20_04395at 4586.063 kb on - strand, within MPMX20_04395at 4586.063 kb on - strand, within MPMX20_04395at 4586.063 kb on - strand, within MPMX20_04395at 4586.073 kb on - strand, within MPMX20_04395at 4586.078 kb on - strand, within MPMX20_04395at 4586.082 kb on + strand, within MPMX20_04395at 4586.113 kb on - strand, within MPMX20_04395at 4586.121 kb on - strand, within MPMX20_04395at 4586.127 kb on - strand, within MPMX20_04395at 4586.128 kb on - strand, within MPMX20_04395at 4586.170 kb on + strand, within MPMX20_04395at 4586.193 kb on + strand, within MPMX20_04395at 4586.193 kb on + strand, within MPMX20_04395at 4586.207 kb on - strand, within MPMX20_04395at 4586.246 kb on - strand, within MPMX20_04395

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Xylose (C)
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4,582,751 - MPMX20_04392 0.33 -0.2
4,582,867 - MPMX20_04392 0.43 +0.1
4,582,869 + MPMX20_04392 0.43 -1.5
4,582,874 - MPMX20_04392 0.43 -1.1
4,582,902 + MPMX20_04392 0.45 +1.1
4,582,923 + MPMX20_04392 0.47 +0.7
4,582,931 - MPMX20_04392 0.48 +0.1
4,582,931 - MPMX20_04392 0.48 -1.5
4,582,956 - MPMX20_04392 0.49 -0.2
4,583,008 - MPMX20_04392 0.54 +0.7
4,583,016 - MPMX20_04392 0.54 -0.2
4,583,021 - MPMX20_04392 0.55 +0.6
4,583,035 + MPMX20_04392 0.56 +0.7
4,583,043 - MPMX20_04392 0.56 +2.5
4,583,094 + MPMX20_04392 0.60 +0.8
4,583,094 + MPMX20_04392 0.60 -0.3
4,583,094 + MPMX20_04392 0.60 -0.6
4,583,094 + MPMX20_04392 0.60 +1.3
4,583,094 + MPMX20_04392 0.60 +0.5
4,583,102 - MPMX20_04392 0.61 -0.5
4,583,102 - MPMX20_04392 0.61 +0.1
4,583,102 - MPMX20_04392 0.61 +0.1
4,583,102 - MPMX20_04392 0.61 +1.5
4,583,107 - MPMX20_04392 0.61 -0.6
4,583,208 + MPMX20_04392 0.69 +0.8
4,583,266 + MPMX20_04392 0.74 -1.0
4,583,379 + MPMX20_04392 0.83 +1.5
4,583,423 - MPMX20_04392 0.86 -0.5
4,583,477 - -0.5
4,583,502 + +0.3
4,583,510 - -1.2
4,583,510 - +2.3
4,583,567 + -0.4
4,583,567 + -0.3
4,583,575 - +1.1
4,583,580 - -1.2
4,583,699 + -1.5
4,583,716 + -1.4
4,583,716 + -1.1
4,583,724 - -0.1
4,583,724 - +0.1
4,583,810 - +0.1
4,583,819 + -3.0
4,583,960 - MPMX20_04393 0.14 +0.1
4,584,013 + MPMX20_04393 0.18 -2.4
4,584,030 + MPMX20_04393 0.19 -1.8
4,584,048 - MPMX20_04393 0.20 -0.9
4,584,191 - MPMX20_04393 0.30 -1.8
4,584,251 - MPMX20_04393 0.34 +1.3
4,584,444 - MPMX20_04393 0.46 +0.1
4,584,445 + MPMX20_04393 0.46 -1.7
4,584,536 + MPMX20_04393 0.53 -1.8
4,584,585 - MPMX20_04393 0.56 -1.2
4,584,585 - MPMX20_04393 0.56 -0.7
4,584,604 + MPMX20_04393 0.57 -1.6
4,584,612 - MPMX20_04393 0.58 +0.3
4,584,614 + MPMX20_04393 0.58 -1.7
4,584,614 + MPMX20_04393 0.58 +1.4
4,584,701 + MPMX20_04393 0.64 -1.2
4,584,709 - MPMX20_04393 0.64 +1.5
4,584,772 + MPMX20_04393 0.68 -0.9
4,584,780 - MPMX20_04393 0.69 +1.1
4,584,780 - MPMX20_04393 0.69 -0.7
4,584,780 - MPMX20_04393 0.69 +0.1
4,584,952 + MPMX20_04393 0.80 -0.0
4,585,003 + MPMX20_04393 0.84 -0.7
4,585,013 + MPMX20_04393 0.84 -0.2
4,585,013 + MPMX20_04393 0.84 +0.0
4,585,013 + MPMX20_04393 0.84 +0.5
4,585,013 + MPMX20_04393 0.84 -1.3
4,585,013 + MPMX20_04393 0.84 -1.1
4,585,013 + MPMX20_04393 0.84 -0.7
4,585,021 - MPMX20_04393 0.85 -1.2
4,585,021 - MPMX20_04393 0.85 -1.2
4,585,028 + MPMX20_04393 0.85 -2.6
4,585,048 - MPMX20_04393 0.87 -1.8
4,585,049 - MPMX20_04393 0.87 -1.1
4,585,087 + MPMX20_04393 0.89 +0.1
4,585,105 - +1.1
4,585,322 - +1.6
4,585,332 + -1.5
4,585,335 - +0.1
4,585,340 - MPMX20_04394 0.11 -0.6
4,585,345 - MPMX20_04394 0.13 +1.2
4,585,350 - MPMX20_04394 0.14 +1.2
4,585,359 + MPMX20_04394 0.17 +0.3
4,585,367 - MPMX20_04394 0.19 -0.1
4,585,423 + MPMX20_04394 0.36 +0.3
4,585,431 - MPMX20_04394 0.38 +0.9
4,585,440 + MPMX20_04394 0.41 +0.7
4,585,448 - MPMX20_04394 0.43 -0.1
4,585,475 + MPMX20_04394 0.51 -0.4
4,585,494 - MPMX20_04394 0.57 -0.3
4,585,504 + MPMX20_04394 0.60 -0.4
4,585,547 - MPMX20_04394 0.73 -0.7
4,585,547 - MPMX20_04394 0.73 +1.4
4,585,551 - MPMX20_04394 0.74 -0.0
4,585,658 - +0.3
4,585,671 + +1.3
4,585,671 + +0.9
4,585,679 - +0.7
4,585,687 + +0.7
4,585,687 + +0.3
4,585,687 + -0.4
4,585,689 + -0.6
4,585,697 - +0.2
4,585,697 - +0.8
4,585,774 + +0.5
4,585,774 + -1.1
4,585,782 - -0.8
4,585,782 - +1.4
4,585,782 - -0.3
4,585,806 + -0.6
4,585,806 + -0.5
4,585,806 + +0.0
4,585,830 - -0.6
4,585,864 + +0.5
4,585,911 + +0.8
4,585,911 + +2.8
4,585,911 + +2.5
4,585,911 + -0.9
4,585,911 + -2.4
4,585,911 + +1.1
4,585,919 - -0.3
4,585,919 - +1.3
4,585,919 - -1.4
4,585,919 - -0.9
4,585,919 - -2.0
4,585,919 - -1.3
4,585,975 - MPMX20_04395 0.12 -1.2
4,585,975 - MPMX20_04395 0.12 +0.9
4,585,975 - MPMX20_04395 0.12 -0.2
4,586,004 + MPMX20_04395 0.19 +0.1
4,586,004 + MPMX20_04395 0.19 -0.2
4,586,055 + MPMX20_04395 0.31 +0.5
4,586,055 + MPMX20_04395 0.31 +0.2
4,586,060 + MPMX20_04395 0.32 +0.2
4,586,063 - MPMX20_04395 0.32 -2.1
4,586,063 - MPMX20_04395 0.32 +0.3
4,586,063 - MPMX20_04395 0.32 +0.3
4,586,073 - MPMX20_04395 0.35 -1.1
4,586,078 - MPMX20_04395 0.36 -1.2
4,586,082 + MPMX20_04395 0.37 +0.5
4,586,113 - MPMX20_04395 0.44 -0.8
4,586,121 - MPMX20_04395 0.46 -0.9
4,586,127 - MPMX20_04395 0.47 -1.8
4,586,128 - MPMX20_04395 0.47 -0.8
4,586,170 + MPMX20_04395 0.57 +0.7
4,586,193 + MPMX20_04395 0.62 +0.9
4,586,193 + MPMX20_04395 0.62 +0.8
4,586,207 - MPMX20_04395 0.65 -0.5
4,586,246 - MPMX20_04395 0.74 +0.4

Or see this region's nucleotide sequence