Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02740

Experiment: D-Xylose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02738 and MPMX20_02739 are separated by 96 nucleotidesMPMX20_02739 and MPMX20_02740 are separated by 132 nucleotidesMPMX20_02740 and MPMX20_02741 overlap by 32 nucleotides MPMX20_02738: MPMX20_02738 - RNA chaperone ProQ, at 2,892,657 to 2,893,343 _02738 MPMX20_02739: MPMX20_02739 - Free methionine-R-sulfoxide reductase, at 2,893,440 to 2,893,937 _02739 MPMX20_02740: MPMX20_02740 - Intermembrane transport protein YebS, at 2,894,070 to 2,895,353 _02740 MPMX20_02741: MPMX20_02741 - Intermembrane transport protein YebT, at 2,895,322 to 2,897,955 _02741 Position (kb) 2894 2895 2896Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 2893.078 kb on + strand, within MPMX20_02738at 2893.133 kb on + strand, within MPMX20_02738at 2893.133 kb on + strand, within MPMX20_02738at 2893.133 kb on + strand, within MPMX20_02738at 2893.141 kb on - strand, within MPMX20_02738at 2893.141 kb on - strand, within MPMX20_02738at 2893.141 kb on - strand, within MPMX20_02738at 2893.141 kb on - strand, within MPMX20_02738at 2893.141 kb on - strand, within MPMX20_02738at 2893.152 kb on + strand, within MPMX20_02738at 2893.190 kb on + strand, within MPMX20_02738at 2893.251 kb on + strand, within MPMX20_02738at 2893.259 kb on - strand, within MPMX20_02738at 2893.267 kb on + strand, within MPMX20_02738at 2893.383 kb on + strandat 2893.383 kb on + strandat 2893.391 kb on - strandat 2893.429 kb on - strandat 2893.514 kb on + strand, within MPMX20_02739at 2893.518 kb on - strand, within MPMX20_02739at 2893.520 kb on + strand, within MPMX20_02739at 2893.530 kb on + strand, within MPMX20_02739at 2893.537 kb on + strand, within MPMX20_02739at 2893.537 kb on + strand, within MPMX20_02739at 2893.545 kb on - strand, within MPMX20_02739at 2893.548 kb on + strand, within MPMX20_02739at 2893.556 kb on - strand, within MPMX20_02739at 2893.641 kb on + strand, within MPMX20_02739at 2893.643 kb on - strand, within MPMX20_02739at 2893.643 kb on - strand, within MPMX20_02739at 2893.649 kb on - strand, within MPMX20_02739at 2893.678 kb on + strand, within MPMX20_02739at 2893.690 kb on - strand, within MPMX20_02739at 2893.690 kb on - strand, within MPMX20_02739at 2893.743 kb on + strand, within MPMX20_02739at 2893.777 kb on - strand, within MPMX20_02739at 2893.793 kb on + strand, within MPMX20_02739at 2893.793 kb on + strand, within MPMX20_02739at 2893.801 kb on - strand, within MPMX20_02739at 2893.809 kb on + strand, within MPMX20_02739at 2893.814 kb on + strand, within MPMX20_02739at 2893.816 kb on + strand, within MPMX20_02739at 2893.816 kb on + strand, within MPMX20_02739at 2893.816 kb on + strand, within MPMX20_02739at 2893.817 kb on - strand, within MPMX20_02739at 2893.817 kb on - strand, within MPMX20_02739at 2893.854 kb on - strand, within MPMX20_02739at 2893.854 kb on - strand, within MPMX20_02739at 2893.854 kb on - strand, within MPMX20_02739at 2893.864 kb on - strand, within MPMX20_02739at 2893.879 kb on + strand, within MPMX20_02739at 2893.885 kb on - strand, within MPMX20_02739at 2893.887 kb on - strand, within MPMX20_02739at 2893.887 kb on - strand, within MPMX20_02739at 2893.905 kb on + strandat 2893.913 kb on - strandat 2893.991 kb on + strandat 2894.012 kb on + strandat 2894.020 kb on - strandat 2894.037 kb on - strandat 2894.047 kb on - strandat 2894.049 kb on + strandat 2894.066 kb on + strandat 2894.072 kb on - strandat 2894.074 kb on - strandat 2894.074 kb on - strandat 2894.133 kb on + strandat 2894.133 kb on + strandat 2894.133 kb on + strandat 2894.133 kb on + strandat 2894.141 kb on - strandat 2894.141 kb on - strandat 2894.141 kb on - strandat 2894.141 kb on - strandat 2894.141 kb on - strandat 2894.141 kb on - strandat 2894.141 kb on - strandat 2894.158 kb on + strandat 2894.164 kb on - strandat 2894.233 kb on - strand, within MPMX20_02740at 2894.285 kb on + strand, within MPMX20_02740at 2894.329 kb on - strand, within MPMX20_02740at 2894.379 kb on - strand, within MPMX20_02740at 2894.384 kb on - strand, within MPMX20_02740at 2894.430 kb on + strand, within MPMX20_02740at 2894.435 kb on + strand, within MPMX20_02740at 2894.435 kb on + strand, within MPMX20_02740at 2894.523 kb on + strand, within MPMX20_02740at 2894.569 kb on + strand, within MPMX20_02740at 2894.581 kb on + strand, within MPMX20_02740at 2894.604 kb on + strand, within MPMX20_02740at 2894.604 kb on + strand, within MPMX20_02740at 2894.612 kb on - strand, within MPMX20_02740at 2894.612 kb on - strand, within MPMX20_02740at 2894.632 kb on + strand, within MPMX20_02740at 2894.632 kb on + strand, within MPMX20_02740at 2894.635 kb on - strand, within MPMX20_02740at 2894.635 kb on - strand, within MPMX20_02740at 2894.635 kb on - strand, within MPMX20_02740at 2894.661 kb on + strand, within MPMX20_02740at 2894.674 kb on + strand, within MPMX20_02740at 2894.675 kb on + strand, within MPMX20_02740at 2894.682 kb on - strand, within MPMX20_02740at 2894.688 kb on + strand, within MPMX20_02740at 2894.705 kb on + strand, within MPMX20_02740at 2894.705 kb on + strand, within MPMX20_02740at 2894.717 kb on + strand, within MPMX20_02740at 2894.717 kb on + strand, within MPMX20_02740at 2894.717 kb on + strand, within MPMX20_02740at 2894.725 kb on - strand, within MPMX20_02740at 2894.725 kb on - strand, within MPMX20_02740at 2894.725 kb on - strand, within MPMX20_02740at 2894.725 kb on - strand, within MPMX20_02740at 2894.765 kb on - strand, within MPMX20_02740at 2894.770 kb on - strand, within MPMX20_02740at 2894.782 kb on + strand, within MPMX20_02740at 2894.782 kb on + strand, within MPMX20_02740at 2894.790 kb on - strand, within MPMX20_02740at 2894.795 kb on - strand, within MPMX20_02740at 2894.821 kb on + strand, within MPMX20_02740at 2894.821 kb on + strand, within MPMX20_02740at 2894.827 kb on - strand, within MPMX20_02740at 2894.838 kb on - strand, within MPMX20_02740at 2894.858 kb on + strand, within MPMX20_02740at 2894.991 kb on - strand, within MPMX20_02740at 2894.993 kb on + strand, within MPMX20_02740at 2894.996 kb on - strand, within MPMX20_02740at 2894.998 kb on + strand, within MPMX20_02740at 2895.031 kb on + strand, within MPMX20_02740at 2895.064 kb on + strand, within MPMX20_02740at 2895.072 kb on - strand, within MPMX20_02740at 2895.072 kb on - strand, within MPMX20_02740at 2895.072 kb on - strand, within MPMX20_02740at 2895.072 kb on - strand, within MPMX20_02740at 2895.072 kb on - strand, within MPMX20_02740at 2895.072 kb on - strand, within MPMX20_02740at 2895.082 kb on - strand, within MPMX20_02740at 2895.089 kb on + strand, within MPMX20_02740at 2895.089 kb on + strand, within MPMX20_02740at 2895.089 kb on + strand, within MPMX20_02740at 2895.089 kb on + strand, within MPMX20_02740at 2895.089 kb on + strand, within MPMX20_02740at 2895.097 kb on - strand, within MPMX20_02740at 2895.097 kb on - strand, within MPMX20_02740at 2895.097 kb on - strand, within MPMX20_02740at 2895.205 kb on + strand, within MPMX20_02740at 2895.215 kb on + strand, within MPMX20_02740at 2895.378 kb on + strandat 2895.409 kb on + strandat 2895.417 kb on - strandat 2895.451 kb on + strandat 2895.494 kb on + strandat 2895.530 kb on + strandat 2895.530 kb on + strandat 2895.537 kb on + strandat 2895.538 kb on - strandat 2895.608 kb on - strand, within MPMX20_02741at 2895.608 kb on - strand, within MPMX20_02741at 2895.642 kb on + strand, within MPMX20_02741at 2895.651 kb on + strand, within MPMX20_02741at 2895.656 kb on + strand, within MPMX20_02741at 2895.658 kb on + strand, within MPMX20_02741at 2895.685 kb on + strand, within MPMX20_02741at 2895.719 kb on + strand, within MPMX20_02741at 2895.729 kb on + strand, within MPMX20_02741at 2895.729 kb on + strand, within MPMX20_02741at 2895.729 kb on + strand, within MPMX20_02741at 2895.729 kb on + strand, within MPMX20_02741at 2895.737 kb on - strand, within MPMX20_02741at 2895.783 kb on - strand, within MPMX20_02741at 2895.837 kb on + strand, within MPMX20_02741at 2895.837 kb on + strand, within MPMX20_02741at 2895.845 kb on - strand, within MPMX20_02741at 2896.000 kb on - strand, within MPMX20_02741at 2896.033 kb on - strand, within MPMX20_02741at 2896.059 kb on + strand, within MPMX20_02741at 2896.067 kb on - strand, within MPMX20_02741at 2896.067 kb on - strand, within MPMX20_02741at 2896.138 kb on + strand, within MPMX20_02741at 2896.153 kb on - strand, within MPMX20_02741at 2896.187 kb on + strand, within MPMX20_02741at 2896.195 kb on - strand, within MPMX20_02741at 2896.216 kb on - strand, within MPMX20_02741at 2896.251 kb on + strand, within MPMX20_02741

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Xylose (C)
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2,893,078 + MPMX20_02738 0.61 -0.9
2,893,133 + MPMX20_02738 0.69 -0.2
2,893,133 + MPMX20_02738 0.69 +0.0
2,893,133 + MPMX20_02738 0.69 +0.1
2,893,141 - MPMX20_02738 0.70 -0.6
2,893,141 - MPMX20_02738 0.70 +1.4
2,893,141 - MPMX20_02738 0.70 +0.3
2,893,141 - MPMX20_02738 0.70 -0.8
2,893,141 - MPMX20_02738 0.70 -2.3
2,893,152 + MPMX20_02738 0.72 -1.4
2,893,190 + MPMX20_02738 0.78 +1.0
2,893,251 + MPMX20_02738 0.86 -0.5
2,893,259 - MPMX20_02738 0.88 +0.6
2,893,267 + MPMX20_02738 0.89 +0.2
2,893,383 + +1.5
2,893,383 + -0.4
2,893,391 - +1.5
2,893,429 - -0.7
2,893,514 + MPMX20_02739 0.15 -0.6
2,893,518 - MPMX20_02739 0.16 -1.6
2,893,520 + MPMX20_02739 0.16 -1.5
2,893,530 + MPMX20_02739 0.18 -2.8
2,893,537 + MPMX20_02739 0.19 +0.5
2,893,537 + MPMX20_02739 0.19 +0.5
2,893,545 - MPMX20_02739 0.21 +0.2
2,893,548 + MPMX20_02739 0.22 +0.3
2,893,556 - MPMX20_02739 0.23 +0.7
2,893,641 + MPMX20_02739 0.40 -0.2
2,893,643 - MPMX20_02739 0.41 +0.1
2,893,643 - MPMX20_02739 0.41 +0.3
2,893,649 - MPMX20_02739 0.42 -0.1
2,893,678 + MPMX20_02739 0.48 -2.7
2,893,690 - MPMX20_02739 0.50 +0.0
2,893,690 - MPMX20_02739 0.50 +0.6
2,893,743 + MPMX20_02739 0.61 -0.3
2,893,777 - MPMX20_02739 0.68 -0.1
2,893,793 + MPMX20_02739 0.71 -0.4
2,893,793 + MPMX20_02739 0.71 +0.2
2,893,801 - MPMX20_02739 0.72 -0.6
2,893,809 + MPMX20_02739 0.74 -1.6
2,893,814 + MPMX20_02739 0.75 -0.6
2,893,816 + MPMX20_02739 0.76 +1.6
2,893,816 + MPMX20_02739 0.76 +1.3
2,893,816 + MPMX20_02739 0.76 +0.4
2,893,817 - MPMX20_02739 0.76 +2.1
2,893,817 - MPMX20_02739 0.76 +0.1
2,893,854 - MPMX20_02739 0.83 -0.2
2,893,854 - MPMX20_02739 0.83 -0.1
2,893,854 - MPMX20_02739 0.83 -1.1
2,893,864 - MPMX20_02739 0.85 +0.6
2,893,879 + MPMX20_02739 0.88 +0.2
2,893,885 - MPMX20_02739 0.89 +0.2
2,893,887 - MPMX20_02739 0.90 -0.8
2,893,887 - MPMX20_02739 0.90 -1.1
2,893,905 + -1.6
2,893,913 - -0.6
2,893,991 + -0.9
2,894,012 + +0.3
2,894,020 - -1.1
2,894,037 - -1.5
2,894,047 - +0.4
2,894,049 + -1.9
2,894,066 + +0.9
2,894,072 - -0.4
2,894,074 - -1.0
2,894,074 - +0.0
2,894,133 + +0.2
2,894,133 + +0.3
2,894,133 + +1.9
2,894,133 + +0.8
2,894,141 - +0.1
2,894,141 - -1.5
2,894,141 - -0.2
2,894,141 - +0.5
2,894,141 - -2.4
2,894,141 - +0.6
2,894,141 - -1.1
2,894,158 + -0.9
2,894,164 - -0.6
2,894,233 - MPMX20_02740 0.13 +1.6
2,894,285 + MPMX20_02740 0.17 -0.6
2,894,329 - MPMX20_02740 0.20 -0.5
2,894,379 - MPMX20_02740 0.24 +0.7
2,894,384 - MPMX20_02740 0.24 -0.8
2,894,430 + MPMX20_02740 0.28 +0.4
2,894,435 + MPMX20_02740 0.28 +1.3
2,894,435 + MPMX20_02740 0.28 +0.8
2,894,523 + MPMX20_02740 0.35 -0.9
2,894,569 + MPMX20_02740 0.39 -0.4
2,894,581 + MPMX20_02740 0.40 +1.4
2,894,604 + MPMX20_02740 0.42 +0.9
2,894,604 + MPMX20_02740 0.42 -0.5
2,894,612 - MPMX20_02740 0.42 +4.5
2,894,612 - MPMX20_02740 0.42 +0.4
2,894,632 + MPMX20_02740 0.44 +1.2
2,894,632 + MPMX20_02740 0.44 +1.6
2,894,635 - MPMX20_02740 0.44 -1.2
2,894,635 - MPMX20_02740 0.44 -0.5
2,894,635 - MPMX20_02740 0.44 -1.0
2,894,661 + MPMX20_02740 0.46 -0.2
2,894,674 + MPMX20_02740 0.47 +0.0
2,894,675 + MPMX20_02740 0.47 -0.1
2,894,682 - MPMX20_02740 0.48 -0.6
2,894,688 + MPMX20_02740 0.48 +1.1
2,894,705 + MPMX20_02740 0.49 +0.4
2,894,705 + MPMX20_02740 0.49 +0.3
2,894,717 + MPMX20_02740 0.50 -0.1
2,894,717 + MPMX20_02740 0.50 +0.1
2,894,717 + MPMX20_02740 0.50 -1.9
2,894,725 - MPMX20_02740 0.51 +0.1
2,894,725 - MPMX20_02740 0.51 +0.2
2,894,725 - MPMX20_02740 0.51 -0.8
2,894,725 - MPMX20_02740 0.51 +0.0
2,894,765 - MPMX20_02740 0.54 +0.4
2,894,770 - MPMX20_02740 0.55 -2.8
2,894,782 + MPMX20_02740 0.55 -3.0
2,894,782 + MPMX20_02740 0.55 +0.2
2,894,790 - MPMX20_02740 0.56 -0.0
2,894,795 - MPMX20_02740 0.56 -0.5
2,894,821 + MPMX20_02740 0.58 -1.3
2,894,821 + MPMX20_02740 0.58 +0.2
2,894,827 - MPMX20_02740 0.59 +0.1
2,894,838 - MPMX20_02740 0.60 -1.7
2,894,858 + MPMX20_02740 0.61 +0.8
2,894,991 - MPMX20_02740 0.72 -1.6
2,894,993 + MPMX20_02740 0.72 +0.5
2,894,996 - MPMX20_02740 0.72 +0.8
2,894,998 + MPMX20_02740 0.72 -0.1
2,895,031 + MPMX20_02740 0.75 +0.8
2,895,064 + MPMX20_02740 0.77 -0.2
2,895,072 - MPMX20_02740 0.78 +0.4
2,895,072 - MPMX20_02740 0.78 -0.9
2,895,072 - MPMX20_02740 0.78 +2.2
2,895,072 - MPMX20_02740 0.78 +0.1
2,895,072 - MPMX20_02740 0.78 -0.9
2,895,072 - MPMX20_02740 0.78 +0.6
2,895,082 - MPMX20_02740 0.79 +1.2
2,895,089 + MPMX20_02740 0.79 +1.8
2,895,089 + MPMX20_02740 0.79 +0.8
2,895,089 + MPMX20_02740 0.79 -0.0
2,895,089 + MPMX20_02740 0.79 -0.2
2,895,089 + MPMX20_02740 0.79 +0.5
2,895,097 - MPMX20_02740 0.80 -0.9
2,895,097 - MPMX20_02740 0.80 -1.1
2,895,097 - MPMX20_02740 0.80 -0.6
2,895,205 + MPMX20_02740 0.88 +3.7
2,895,215 + MPMX20_02740 0.89 -1.9
2,895,378 + -0.9
2,895,409 + -0.6
2,895,417 - -0.4
2,895,451 + -1.1
2,895,494 + -0.5
2,895,530 + +0.1
2,895,530 + +0.2
2,895,537 + +0.1
2,895,538 - +0.9
2,895,608 - MPMX20_02741 0.11 -0.8
2,895,608 - MPMX20_02741 0.11 +0.7
2,895,642 + MPMX20_02741 0.12 +1.0
2,895,651 + MPMX20_02741 0.12 +0.0
2,895,656 + MPMX20_02741 0.13 -1.2
2,895,658 + MPMX20_02741 0.13 +0.5
2,895,685 + MPMX20_02741 0.14 +1.8
2,895,719 + MPMX20_02741 0.15 +0.5
2,895,729 + MPMX20_02741 0.15 +0.3
2,895,729 + MPMX20_02741 0.15 -0.5
2,895,729 + MPMX20_02741 0.15 +0.1
2,895,729 + MPMX20_02741 0.15 +0.5
2,895,737 - MPMX20_02741 0.16 +0.4
2,895,783 - MPMX20_02741 0.18 +1.7
2,895,837 + MPMX20_02741 0.20 -0.9
2,895,837 + MPMX20_02741 0.20 -0.2
2,895,845 - MPMX20_02741 0.20 -0.8
2,896,000 - MPMX20_02741 0.26 +0.6
2,896,033 - MPMX20_02741 0.27 +1.2
2,896,059 + MPMX20_02741 0.28 +0.7
2,896,067 - MPMX20_02741 0.28 +0.9
2,896,067 - MPMX20_02741 0.28 +0.8
2,896,138 + MPMX20_02741 0.31 +0.4
2,896,153 - MPMX20_02741 0.32 +5.4
2,896,187 + MPMX20_02741 0.33 +0.5
2,896,195 - MPMX20_02741 0.33 +0.1
2,896,216 - MPMX20_02741 0.34 +0.1
2,896,251 + MPMX20_02741 0.35 -0.1

Or see this region's nucleotide sequence