Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01742

Experiment: D-Xylose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01741 and MPMX20_01742 are separated by 126 nucleotidesMPMX20_01742 and MPMX20_01743 are separated by 124 nucleotides MPMX20_01741: MPMX20_01741 - Dihydroorotase, at 1,835,495 to 1,836,541 _01741 MPMX20_01742: MPMX20_01742 - putative lipoprotein YceB, at 1,836,668 to 1,837,228 _01742 MPMX20_01743: MPMX20_01743 - Multidrug resistance protein MdtH, at 1,837,353 to 1,838,561 _01743 Position (kb) 1836 1837 1838Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1835.679 kb on + strand, within MPMX20_01741at 1835.687 kb on - strand, within MPMX20_01741at 1835.706 kb on - strand, within MPMX20_01741at 1835.711 kb on + strand, within MPMX20_01741at 1835.797 kb on + strand, within MPMX20_01741at 1835.869 kb on + strand, within MPMX20_01741at 1835.879 kb on + strand, within MPMX20_01741at 1835.885 kb on - strand, within MPMX20_01741at 1835.887 kb on - strand, within MPMX20_01741at 1835.887 kb on - strand, within MPMX20_01741at 1835.887 kb on - strand, within MPMX20_01741at 1835.921 kb on - strand, within MPMX20_01741at 1835.970 kb on - strand, within MPMX20_01741at 1835.978 kb on + strand, within MPMX20_01741at 1836.019 kb on - strand, within MPMX20_01741at 1836.033 kb on + strand, within MPMX20_01741at 1836.156 kb on + strand, within MPMX20_01741at 1836.253 kb on - strand, within MPMX20_01741at 1836.309 kb on - strand, within MPMX20_01741at 1836.384 kb on + strand, within MPMX20_01741at 1836.436 kb on - strand, within MPMX20_01741at 1836.443 kb on + strandat 1836.444 kb on + strandat 1836.451 kb on - strandat 1836.451 kb on - strandat 1836.452 kb on - strandat 1836.530 kb on - strandat 1836.545 kb on + strandat 1836.554 kb on - strandat 1836.651 kb on + strandat 1836.665 kb on + strandat 1836.700 kb on + strandat 1836.706 kb on + strandat 1836.714 kb on - strandat 1836.737 kb on + strand, within MPMX20_01742at 1836.737 kb on + strand, within MPMX20_01742at 1836.744 kb on + strand, within MPMX20_01742at 1836.744 kb on + strand, within MPMX20_01742at 1836.745 kb on - strand, within MPMX20_01742at 1836.745 kb on - strand, within MPMX20_01742at 1836.752 kb on - strand, within MPMX20_01742at 1836.752 kb on - strand, within MPMX20_01742at 1836.754 kb on + strand, within MPMX20_01742at 1836.766 kb on + strand, within MPMX20_01742at 1836.767 kb on + strand, within MPMX20_01742at 1836.792 kb on - strand, within MPMX20_01742at 1836.818 kb on + strand, within MPMX20_01742at 1836.828 kb on - strand, within MPMX20_01742at 1836.840 kb on + strand, within MPMX20_01742at 1836.848 kb on - strand, within MPMX20_01742at 1836.884 kb on - strand, within MPMX20_01742at 1836.930 kb on + strand, within MPMX20_01742at 1836.938 kb on - strand, within MPMX20_01742at 1836.973 kb on - strand, within MPMX20_01742at 1837.033 kb on + strand, within MPMX20_01742at 1837.041 kb on - strand, within MPMX20_01742at 1837.052 kb on + strand, within MPMX20_01742at 1837.168 kb on + strand, within MPMX20_01742at 1837.168 kb on + strand, within MPMX20_01742at 1837.168 kb on + strand, within MPMX20_01742at 1837.168 kb on + strand, within MPMX20_01742at 1837.168 kb on + strand, within MPMX20_01742at 1837.173 kb on + strandat 1837.176 kb on - strandat 1837.176 kb on - strandat 1837.176 kb on - strandat 1837.230 kb on + strandat 1837.254 kb on + strandat 1837.450 kb on + strandat 1837.478 kb on - strand, within MPMX20_01743at 1837.523 kb on - strand, within MPMX20_01743at 1837.624 kb on - strand, within MPMX20_01743at 1837.635 kb on + strand, within MPMX20_01743at 1837.653 kb on - strand, within MPMX20_01743at 1837.675 kb on + strand, within MPMX20_01743at 1837.694 kb on + strand, within MPMX20_01743at 1837.702 kb on - strand, within MPMX20_01743at 1837.747 kb on - strand, within MPMX20_01743at 1837.777 kb on + strand, within MPMX20_01743at 1837.785 kb on - strand, within MPMX20_01743at 1837.861 kb on + strand, within MPMX20_01743at 1837.877 kb on + strand, within MPMX20_01743at 1837.894 kb on + strand, within MPMX20_01743at 1837.941 kb on + strand, within MPMX20_01743at 1837.956 kb on + strand, within MPMX20_01743at 1837.964 kb on - strand, within MPMX20_01743at 1837.964 kb on - strand, within MPMX20_01743at 1837.964 kb on - strand, within MPMX20_01743at 1838.013 kb on - strand, within MPMX20_01743at 1838.017 kb on + strand, within MPMX20_01743at 1838.017 kb on + strand, within MPMX20_01743at 1838.025 kb on - strand, within MPMX20_01743at 1838.059 kb on + strand, within MPMX20_01743at 1838.064 kb on + strand, within MPMX20_01743at 1838.097 kb on + strand, within MPMX20_01743at 1838.097 kb on + strand, within MPMX20_01743at 1838.097 kb on + strand, within MPMX20_01743at 1838.105 kb on - strand, within MPMX20_01743at 1838.125 kb on + strand, within MPMX20_01743at 1838.128 kb on - strand, within MPMX20_01743at 1838.130 kb on + strand, within MPMX20_01743at 1838.130 kb on + strand, within MPMX20_01743at 1838.130 kb on + strand, within MPMX20_01743at 1838.138 kb on - strand, within MPMX20_01743at 1838.138 kb on - strand, within MPMX20_01743at 1838.138 kb on - strand, within MPMX20_01743

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Xylose (C)
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1,835,679 + MPMX20_01741 0.18 -1.9
1,835,687 - MPMX20_01741 0.18 -2.8
1,835,706 - MPMX20_01741 0.20 -3.7
1,835,711 + MPMX20_01741 0.21 -2.9
1,835,797 + MPMX20_01741 0.29 -1.4
1,835,869 + MPMX20_01741 0.36 -0.6
1,835,879 + MPMX20_01741 0.37 -3.4
1,835,885 - MPMX20_01741 0.37 -0.9
1,835,887 - MPMX20_01741 0.37 -2.1
1,835,887 - MPMX20_01741 0.37 -1.6
1,835,887 - MPMX20_01741 0.37 -3.3
1,835,921 - MPMX20_01741 0.41 -1.9
1,835,970 - MPMX20_01741 0.45 -2.9
1,835,978 + MPMX20_01741 0.46 -1.2
1,836,019 - MPMX20_01741 0.50 -3.9
1,836,033 + MPMX20_01741 0.51 -3.1
1,836,156 + MPMX20_01741 0.63 -3.0
1,836,253 - MPMX20_01741 0.72 -1.8
1,836,309 - MPMX20_01741 0.78 -1.2
1,836,384 + MPMX20_01741 0.85 -4.7
1,836,436 - MPMX20_01741 0.90 -2.3
1,836,443 + -3.1
1,836,444 + -2.2
1,836,451 - -3.7
1,836,451 - -3.0
1,836,452 - -3.4
1,836,530 - -0.4
1,836,545 + -1.4
1,836,554 - +0.7
1,836,651 + -0.2
1,836,665 + -0.3
1,836,700 + -0.5
1,836,706 + -0.8
1,836,714 - +2.5
1,836,737 + MPMX20_01742 0.12 +0.9
1,836,737 + MPMX20_01742 0.12 -0.1
1,836,744 + MPMX20_01742 0.14 -0.1
1,836,744 + MPMX20_01742 0.14 -0.6
1,836,745 - MPMX20_01742 0.14 -0.2
1,836,745 - MPMX20_01742 0.14 -0.4
1,836,752 - MPMX20_01742 0.15 -0.4
1,836,752 - MPMX20_01742 0.15 -0.1
1,836,754 + MPMX20_01742 0.15 +0.7
1,836,766 + MPMX20_01742 0.17 +1.4
1,836,767 + MPMX20_01742 0.18 +2.9
1,836,792 - MPMX20_01742 0.22 +0.8
1,836,818 + MPMX20_01742 0.27 -0.9
1,836,828 - MPMX20_01742 0.29 -0.9
1,836,840 + MPMX20_01742 0.31 -0.6
1,836,848 - MPMX20_01742 0.32 -1.4
1,836,884 - MPMX20_01742 0.39 +0.8
1,836,930 + MPMX20_01742 0.47 -0.4
1,836,938 - MPMX20_01742 0.48 -0.6
1,836,973 - MPMX20_01742 0.54 -0.3
1,837,033 + MPMX20_01742 0.65 -0.0
1,837,041 - MPMX20_01742 0.66 -0.6
1,837,052 + MPMX20_01742 0.68 -0.3
1,837,168 + MPMX20_01742 0.89 +0.9
1,837,168 + MPMX20_01742 0.89 -0.1
1,837,168 + MPMX20_01742 0.89 +0.4
1,837,168 + MPMX20_01742 0.89 +0.2
1,837,168 + MPMX20_01742 0.89 +0.4
1,837,173 + +0.1
1,837,176 - +0.7
1,837,176 - -0.4
1,837,176 - +1.8
1,837,230 + +0.1
1,837,254 + +0.4
1,837,450 + -0.7
1,837,478 - MPMX20_01743 0.10 +0.3
1,837,523 - MPMX20_01743 0.14 +0.4
1,837,624 - MPMX20_01743 0.22 +0.3
1,837,635 + MPMX20_01743 0.23 -0.0
1,837,653 - MPMX20_01743 0.25 -0.7
1,837,675 + MPMX20_01743 0.27 +0.7
1,837,694 + MPMX20_01743 0.28 +0.8
1,837,702 - MPMX20_01743 0.29 +0.7
1,837,747 - MPMX20_01743 0.33 +0.1
1,837,777 + MPMX20_01743 0.35 +1.8
1,837,785 - MPMX20_01743 0.36 +0.3
1,837,861 + MPMX20_01743 0.42 -0.1
1,837,877 + MPMX20_01743 0.43 +0.1
1,837,894 + MPMX20_01743 0.45 +0.1
1,837,941 + MPMX20_01743 0.49 -0.7
1,837,956 + MPMX20_01743 0.50 +0.5
1,837,964 - MPMX20_01743 0.51 -0.4
1,837,964 - MPMX20_01743 0.51 +1.0
1,837,964 - MPMX20_01743 0.51 +1.1
1,838,013 - MPMX20_01743 0.55 +0.3
1,838,017 + MPMX20_01743 0.55 -0.4
1,838,017 + MPMX20_01743 0.55 +1.6
1,838,025 - MPMX20_01743 0.56 -0.5
1,838,059 + MPMX20_01743 0.58 +0.6
1,838,064 + MPMX20_01743 0.59 -0.2
1,838,097 + MPMX20_01743 0.62 +0.3
1,838,097 + MPMX20_01743 0.62 -0.3
1,838,097 + MPMX20_01743 0.62 +1.2
1,838,105 - MPMX20_01743 0.62 +1.4
1,838,125 + MPMX20_01743 0.64 +0.3
1,838,128 - MPMX20_01743 0.64 +0.4
1,838,130 + MPMX20_01743 0.64 -0.4
1,838,130 + MPMX20_01743 0.64 +0.6
1,838,130 + MPMX20_01743 0.64 -0.2
1,838,138 - MPMX20_01743 0.65 +0.5
1,838,138 - MPMX20_01743 0.65 -0.1
1,838,138 - MPMX20_01743 0.65 -0.3

Or see this region's nucleotide sequence