Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03311

Experiment: L-Sorbose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03310 and MPMX20_03311 are separated by 40 nucleotidesMPMX20_03311 and MPMX20_03312 are separated by 44 nucleotidesMPMX20_03312 and MPMX20_03313 are separated by 5 nucleotides MPMX20_03310: MPMX20_03310 - Phosphoenolpyruvate-protein phosphotransferase, at 3,478,755 to 3,480,482 _03310 MPMX20_03311: MPMX20_03311 - PTS system glucose-specific EIIA component, at 3,480,523 to 3,481,032 _03311 MPMX20_03312: MPMX20_03312 - Pyridoxine/pyridoxal/pyridoxamine kinase, at 3,481,077 to 3,481,913 _03312 MPMX20_03313: MPMX20_03313 - Cysteine synthase B, at 3,481,919 to 3,482,830 _03313 Position (kb) 3480 3481 3482Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3479.558 kb on + strand, within MPMX20_03310at 3479.632 kb on - strand, within MPMX20_03310at 3479.729 kb on - strand, within MPMX20_03310at 3479.747 kb on - strand, within MPMX20_03310at 3479.858 kb on + strand, within MPMX20_03310at 3479.968 kb on - strand, within MPMX20_03310at 3480.005 kb on - strand, within MPMX20_03310at 3480.057 kb on - strand, within MPMX20_03310at 3480.126 kb on + strand, within MPMX20_03310at 3480.133 kb on + strand, within MPMX20_03310at 3480.133 kb on + strand, within MPMX20_03310at 3480.392 kb on + strandat 3480.392 kb on + strandat 3480.392 kb on + strandat 3481.088 kb on + strandat 3481.088 kb on + strandat 3481.096 kb on - strandat 3481.096 kb on - strandat 3481.113 kb on - strandat 3481.202 kb on + strand, within MPMX20_03312at 3481.202 kb on + strand, within MPMX20_03312at 3481.215 kb on - strand, within MPMX20_03312at 3481.256 kb on + strand, within MPMX20_03312at 3481.263 kb on + strand, within MPMX20_03312at 3481.265 kb on + strand, within MPMX20_03312at 3481.332 kb on + strand, within MPMX20_03312at 3481.332 kb on + strand, within MPMX20_03312at 3481.332 kb on + strand, within MPMX20_03312at 3481.376 kb on - strand, within MPMX20_03312at 3481.417 kb on - strand, within MPMX20_03312at 3481.447 kb on - strand, within MPMX20_03312at 3481.559 kb on + strand, within MPMX20_03312at 3481.559 kb on + strand, within MPMX20_03312at 3481.567 kb on - strand, within MPMX20_03312at 3481.567 kb on - strand, within MPMX20_03312at 3481.613 kb on + strand, within MPMX20_03312at 3481.653 kb on - strand, within MPMX20_03312at 3481.663 kb on + strand, within MPMX20_03312at 3481.673 kb on + strand, within MPMX20_03312at 3481.682 kb on + strand, within MPMX20_03312at 3481.758 kb on - strand, within MPMX20_03312at 3481.833 kb on + strandat 3481.833 kb on + strandat 3481.880 kb on + strandat 3481.887 kb on - strandat 3481.938 kb on + strandat 3481.938 kb on + strandat 3481.944 kb on - strandat 3481.944 kb on - strandat 3481.946 kb on - strandat 3481.954 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Sorbose (C)
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3,479,558 + MPMX20_03310 0.46 -1.1
3,479,632 - MPMX20_03310 0.51 -2.7
3,479,729 - MPMX20_03310 0.56 -2.5
3,479,747 - MPMX20_03310 0.57 -1.3
3,479,858 + MPMX20_03310 0.64 -1.5
3,479,968 - MPMX20_03310 0.70 -1.8
3,480,005 - MPMX20_03310 0.72 -0.9
3,480,057 - MPMX20_03310 0.75 -3.4
3,480,126 + MPMX20_03310 0.79 -2.0
3,480,133 + MPMX20_03310 0.80 -2.6
3,480,133 + MPMX20_03310 0.80 -2.1
3,480,392 + -1.5
3,480,392 + -1.7
3,480,392 + -1.9
3,481,088 + -2.1
3,481,088 + -0.0
3,481,096 - +1.3
3,481,096 - +1.0
3,481,113 - -3.5
3,481,202 + MPMX20_03312 0.15 +1.4
3,481,202 + MPMX20_03312 0.15 +1.7
3,481,215 - MPMX20_03312 0.16 -1.3
3,481,256 + MPMX20_03312 0.21 +1.2
3,481,263 + MPMX20_03312 0.22 -0.7
3,481,265 + MPMX20_03312 0.22 -0.9
3,481,332 + MPMX20_03312 0.30 +0.4
3,481,332 + MPMX20_03312 0.30 +1.1
3,481,332 + MPMX20_03312 0.30 -3.5
3,481,376 - MPMX20_03312 0.36 -0.6
3,481,417 - MPMX20_03312 0.41 -2.0
3,481,447 - MPMX20_03312 0.44 -0.8
3,481,559 + MPMX20_03312 0.58 -2.3
3,481,559 + MPMX20_03312 0.58 +0.6
3,481,567 - MPMX20_03312 0.59 +0.2
3,481,567 - MPMX20_03312 0.59 +0.9
3,481,613 + MPMX20_03312 0.64 -0.6
3,481,653 - MPMX20_03312 0.69 -0.2
3,481,663 + MPMX20_03312 0.70 +0.6
3,481,673 + MPMX20_03312 0.71 -0.1
3,481,682 + MPMX20_03312 0.72 +0.0
3,481,758 - MPMX20_03312 0.81 +0.1
3,481,833 + +1.1
3,481,833 + +1.1
3,481,880 + +1.1
3,481,887 - +0.4
3,481,938 + -1.6
3,481,938 + -0.6
3,481,944 - +1.2
3,481,944 - +0.8
3,481,946 - +2.0
3,481,954 - -0.3

Or see this region's nucleotide sequence