Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03153

Experiment: L-Sorbose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03152 and MPMX20_03153 are separated by 134 nucleotidesMPMX20_03153 and MPMX20_03154 are separated by 19 nucleotides MPMX20_03152: MPMX20_03152 - Nucleoid-associated protein YejK, at 3,314,293 to 3,315,300 _03152 MPMX20_03153: MPMX20_03153 - hypothetical protein, at 3,315,435 to 3,315,662 _03153 MPMX20_03154: MPMX20_03154 - Inner membrane protein YejM, at 3,315,682 to 3,317,442 _03154 Position (kb) 3315 3316Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3314.506 kb on + strand, within MPMX20_03152at 3314.549 kb on - strand, within MPMX20_03152at 3314.618 kb on + strand, within MPMX20_03152at 3314.618 kb on + strand, within MPMX20_03152at 3314.618 kb on + strand, within MPMX20_03152at 3314.618 kb on + strand, within MPMX20_03152at 3314.626 kb on - strand, within MPMX20_03152at 3314.626 kb on - strand, within MPMX20_03152at 3314.626 kb on - strand, within MPMX20_03152at 3314.702 kb on + strand, within MPMX20_03152at 3314.707 kb on + strand, within MPMX20_03152at 3314.769 kb on + strand, within MPMX20_03152at 3314.797 kb on + strand, within MPMX20_03152at 3314.798 kb on + strand, within MPMX20_03152at 3314.901 kb on - strand, within MPMX20_03152at 3314.950 kb on - strand, within MPMX20_03152at 3314.956 kb on + strand, within MPMX20_03152at 3314.999 kb on - strand, within MPMX20_03152at 3315.104 kb on + strand, within MPMX20_03152at 3315.127 kb on + strand, within MPMX20_03152at 3315.133 kb on - strand, within MPMX20_03152at 3315.138 kb on - strand, within MPMX20_03152at 3315.166 kb on - strand, within MPMX20_03152at 3315.166 kb on - strand, within MPMX20_03152at 3315.168 kb on - strand, within MPMX20_03152at 3315.234 kb on + strandat 3315.242 kb on - strandat 3315.242 kb on - strandat 3315.242 kb on - strandat 3315.242 kb on - strandat 3315.249 kb on - strandat 3315.457 kb on + strandat 3315.491 kb on + strand, within MPMX20_03153at 3315.624 kb on + strand, within MPMX20_03153at 3315.624 kb on + strand, within MPMX20_03153at 3315.677 kb on + strandat 3316.389 kb on + strand, within MPMX20_03154at 3316.389 kb on + strand, within MPMX20_03154at 3316.389 kb on + strand, within MPMX20_03154at 3316.389 kb on + strand, within MPMX20_03154at 3316.404 kb on + strand, within MPMX20_03154at 3316.501 kb on + strand, within MPMX20_03154at 3316.563 kb on + strand, within MPMX20_03154at 3316.563 kb on + strand, within MPMX20_03154at 3316.563 kb on + strand, within MPMX20_03154at 3316.563 kb on + strand, within MPMX20_03154at 3316.571 kb on - strand, within MPMX20_03154at 3316.632 kb on + strand, within MPMX20_03154at 3316.640 kb on - strand, within MPMX20_03154

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Sorbose (C)
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3,314,506 + MPMX20_03152 0.21 -1.0
3,314,549 - MPMX20_03152 0.25 +1.3
3,314,618 + MPMX20_03152 0.32 -1.4
3,314,618 + MPMX20_03152 0.32 +1.1
3,314,618 + MPMX20_03152 0.32 -3.7
3,314,618 + MPMX20_03152 0.32 +0.8
3,314,626 - MPMX20_03152 0.33 -2.7
3,314,626 - MPMX20_03152 0.33 -2.0
3,314,626 - MPMX20_03152 0.33 -3.7
3,314,702 + MPMX20_03152 0.41 +1.6
3,314,707 + MPMX20_03152 0.41 -2.5
3,314,769 + MPMX20_03152 0.47 +1.7
3,314,797 + MPMX20_03152 0.50 -1.7
3,314,798 + MPMX20_03152 0.50 -2.0
3,314,901 - MPMX20_03152 0.60 +1.0
3,314,950 - MPMX20_03152 0.65 +1.9
3,314,956 + MPMX20_03152 0.66 +1.8
3,314,999 - MPMX20_03152 0.70 +1.8
3,315,104 + MPMX20_03152 0.80 -0.3
3,315,127 + MPMX20_03152 0.83 +0.9
3,315,133 - MPMX20_03152 0.83 +1.6
3,315,138 - MPMX20_03152 0.84 +0.7
3,315,166 - MPMX20_03152 0.87 -2.2
3,315,166 - MPMX20_03152 0.87 +0.2
3,315,168 - MPMX20_03152 0.87 +0.1
3,315,234 + -2.2
3,315,242 - -2.5
3,315,242 - +0.6
3,315,242 - -1.0
3,315,242 - +0.3
3,315,249 - +1.6
3,315,457 + -1.0
3,315,491 + MPMX20_03153 0.25 -0.5
3,315,624 + MPMX20_03153 0.83 -3.7
3,315,624 + MPMX20_03153 0.83 -1.5
3,315,677 + -3.1
3,316,389 + MPMX20_03154 0.40 -1.5
3,316,389 + MPMX20_03154 0.40 +0.3
3,316,389 + MPMX20_03154 0.40 -2.9
3,316,389 + MPMX20_03154 0.40 -0.5
3,316,404 + MPMX20_03154 0.41 -0.5
3,316,501 + MPMX20_03154 0.47 -3.0
3,316,563 + MPMX20_03154 0.50 -4.5
3,316,563 + MPMX20_03154 0.50 -1.4
3,316,563 + MPMX20_03154 0.50 +1.3
3,316,563 + MPMX20_03154 0.50 -2.8
3,316,571 - MPMX20_03154 0.50 -1.0
3,316,632 + MPMX20_03154 0.54 -3.0
3,316,640 - MPMX20_03154 0.54 +1.0

Or see this region's nucleotide sequence