Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00966 and MPMX20_00967 overlap by 4 nucleotides MPMX20_00967 and MPMX20_00968 are separated by 249 nucleotides MPMX20_00968 and MPMX20_00969 overlap by 4 nucleotides
MPMX20_00966: MPMX20_00966 - hypothetical protein, at 1,019,271 to 1,020,368
_00966
MPMX20_00967: MPMX20_00967 - Inner membrane protein YaiY, at 1,020,365 to 1,020,667
_00967
MPMX20_00968: MPMX20_00968 - hypothetical protein, at 1,020,917 to 1,021,153
_00968
MPMX20_00969: MPMX20_00969 - D-alanine--D-alanine ligase A, at 1,021,150 to 1,022,250
_00969
Position (kb)
1020
1021
1022 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1019.945 kb on - strand, within MPMX20_00966 at 1019.972 kb on + strand, within MPMX20_00966 at 1019.972 kb on + strand, within MPMX20_00966 at 1019.972 kb on + strand, within MPMX20_00966 at 1020.037 kb on + strand, within MPMX20_00966 at 1020.099 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.203 kb on + strand, within MPMX20_00966 at 1020.203 kb on + strand, within MPMX20_00966 at 1020.256 kb on + strand, within MPMX20_00966 at 1020.279 kb on - strand at 1020.298 kb on + strand at 1020.313 kb on - strand at 1020.361 kb on - strand at 1020.388 kb on + strand at 1020.404 kb on + strand, within MPMX20_00967 at 1020.421 kb on - strand, within MPMX20_00967 at 1020.439 kb on + strand, within MPMX20_00967 at 1020.486 kb on + strand, within MPMX20_00967 at 1020.486 kb on + strand, within MPMX20_00967 at 1020.486 kb on + strand, within MPMX20_00967 at 1020.494 kb on - strand, within MPMX20_00967 at 1020.494 kb on - strand, within MPMX20_00967 at 1020.494 kb on - strand, within MPMX20_00967 at 1020.501 kb on + strand, within MPMX20_00967 at 1020.526 kb on - strand, within MPMX20_00967 at 1020.526 kb on - strand, within MPMX20_00967 at 1020.528 kb on - strand, within MPMX20_00967 at 1020.528 kb on - strand, within MPMX20_00967 at 1020.564 kb on - strand, within MPMX20_00967 at 1020.564 kb on - strand, within MPMX20_00967 at 1020.586 kb on + strand, within MPMX20_00967 at 1020.711 kb on + strand at 1020.725 kb on + strand at 1020.725 kb on + strand at 1020.725 kb on + strand at 1020.733 kb on - strand at 1020.733 kb on - strand at 1020.743 kb on + strand at 1020.766 kb on - strand at 1020.766 kb on - strand at 1020.784 kb on - strand at 1020.797 kb on - strand at 1020.858 kb on + strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.935 kb on - strand at 1020.935 kb on - strand at 1020.935 kb on - strand at 1020.961 kb on - strand, within MPMX20_00968 at 1020.995 kb on + strand, within MPMX20_00968 at 1021.006 kb on + strand, within MPMX20_00968 at 1021.014 kb on - strand, within MPMX20_00968 at 1021.033 kb on + strand, within MPMX20_00968 at 1021.195 kb on - strand at 1021.219 kb on + strand at 1021.219 kb on + strand at 1021.227 kb on + strand at 1021.227 kb on - strand at 1021.227 kb on - strand at 1021.232 kb on + strand at 1021.235 kb on - strand at 1021.268 kb on - strand, within MPMX20_00969 at 1021.268 kb on - strand, within MPMX20_00969 at 1021.296 kb on - strand, within MPMX20_00969 at 1021.296 kb on - strand, within MPMX20_00969 at 1021.344 kb on + strand, within MPMX20_00969 at 1021.380 kb on + strand, within MPMX20_00969 at 1021.443 kb on + strand, within MPMX20_00969 at 1021.509 kb on - strand, within MPMX20_00969 at 1021.523 kb on + strand, within MPMX20_00969 at 1021.541 kb on + strand, within MPMX20_00969 at 1021.554 kb on - strand, within MPMX20_00969 at 1021.558 kb on + strand, within MPMX20_00969 at 1021.630 kb on - strand, within MPMX20_00969 at 1021.722 kb on - strand, within MPMX20_00969 at 1021.744 kb on + strand, within MPMX20_00969 at 1021.749 kb on + strand, within MPMX20_00969 at 1021.749 kb on + strand, within MPMX20_00969 at 1021.754 kb on + strand, within MPMX20_00969 at 1021.789 kb on + strand, within MPMX20_00969 at 1021.797 kb on - strand, within MPMX20_00969 at 1021.797 kb on - strand, within MPMX20_00969 at 1021.807 kb on - strand, within MPMX20_00969 at 1021.849 kb on + strand, within MPMX20_00969 at 1021.857 kb on + strand, within MPMX20_00969 at 1021.857 kb on + strand, within MPMX20_00969 at 1021.865 kb on - strand, within MPMX20_00969 at 1021.891 kb on - strand, within MPMX20_00969 at 1021.935 kb on + strand, within MPMX20_00969 at 1021.935 kb on - strand, within MPMX20_00969 at 1021.996 kb on + strand, within MPMX20_00969 at 1022.001 kb on + strand, within MPMX20_00969 at 1022.024 kb on + strand, within MPMX20_00969 at 1022.141 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 1,019,945 - MPMX20_00966 0.61 -0.4 1,019,972 + MPMX20_00966 0.64 +1.2 1,019,972 + MPMX20_00966 0.64 -0.2 1,019,972 + MPMX20_00966 0.64 +0.3 1,020,037 + MPMX20_00966 0.70 -1.1 1,020,099 + MPMX20_00966 0.75 +0.6 1,020,127 + MPMX20_00966 0.78 +0.6 1,020,127 + MPMX20_00966 0.78 -1.7 1,020,127 + MPMX20_00966 0.78 -0.4 1,020,127 + MPMX20_00966 0.78 -1.1 1,020,127 + MPMX20_00966 0.78 -1.3 1,020,127 + MPMX20_00966 0.78 +1.1 1,020,135 - MPMX20_00966 0.79 +0.1 1,020,135 - MPMX20_00966 0.79 +0.9 1,020,135 - MPMX20_00966 0.79 +2.0 1,020,135 - MPMX20_00966 0.79 -4.3 1,020,135 - MPMX20_00966 0.79 +1.0 1,020,135 - MPMX20_00966 0.79 +0.5 1,020,203 + MPMX20_00966 0.85 -0.6 1,020,203 + MPMX20_00966 0.85 +1.1 1,020,256 + MPMX20_00966 0.90 +0.3 1,020,279 - +1.2 1,020,298 + +1.1 1,020,313 - +0.4 1,020,361 - -0.2 1,020,388 + +0.5 1,020,404 + MPMX20_00967 0.13 -0.2 1,020,421 - MPMX20_00967 0.18 -0.6 1,020,439 + MPMX20_00967 0.24 +0.9 1,020,486 + MPMX20_00967 0.40 -2.5 1,020,486 + MPMX20_00967 0.40 +0.5 1,020,486 + MPMX20_00967 0.40 -3.0 1,020,494 - MPMX20_00967 0.43 -0.8 1,020,494 - MPMX20_00967 0.43 -1.0 1,020,494 - MPMX20_00967 0.43 +1.1 1,020,501 + MPMX20_00967 0.45 -0.9 1,020,526 - MPMX20_00967 0.53 -1.3 1,020,526 - MPMX20_00967 0.53 -2.2 1,020,528 - MPMX20_00967 0.54 -2.5 1,020,528 - MPMX20_00967 0.54 +0.3 1,020,564 - MPMX20_00967 0.66 -0.5 1,020,564 - MPMX20_00967 0.66 +1.2 1,020,586 + MPMX20_00967 0.73 +0.5 1,020,711 + -2.3 1,020,725 + +0.4 1,020,725 + +0.8 1,020,725 + -1.1 1,020,733 - -2.7 1,020,733 - -2.1 1,020,743 + -1.4 1,020,766 - -0.7 1,020,766 - -3.1 1,020,784 - -0.6 1,020,797 - +0.5 1,020,858 + +0.1 1,020,866 - -4.1 1,020,866 - +1.0 1,020,866 - -1.2 1,020,866 - -3.5 1,020,866 - +1.4 1,020,866 - -3.2 1,020,866 - -0.2 1,020,927 + +0.5 1,020,927 + +2.1 1,020,927 + -3.9 1,020,927 + -2.7 1,020,927 + -3.2 1,020,927 + -1.8 1,020,927 + -0.4 1,020,935 - +0.1 1,020,935 - -2.1 1,020,935 - -1.0 1,020,961 - MPMX20_00968 0.19 -0.0 1,020,995 + MPMX20_00968 0.33 -0.9 1,021,006 + MPMX20_00968 0.38 -1.3 1,021,014 - MPMX20_00968 0.41 -3.9 1,021,033 + MPMX20_00968 0.49 -1.2 1,021,195 - -2.7 1,021,219 + -0.7 1,021,219 + -0.7 1,021,227 + +1.3 1,021,227 - -2.3 1,021,227 - +0.8 1,021,232 + +0.3 1,021,235 - +2.3 1,021,268 - MPMX20_00969 0.11 -0.9 1,021,268 - MPMX20_00969 0.11 -3.1 1,021,296 - MPMX20_00969 0.13 +1.2 1,021,296 - MPMX20_00969 0.13 +0.5 1,021,344 + MPMX20_00969 0.18 +0.8 1,021,380 + MPMX20_00969 0.21 -2.0 1,021,443 + MPMX20_00969 0.27 +0.2 1,021,509 - MPMX20_00969 0.33 -1.2 1,021,523 + MPMX20_00969 0.34 -1.3 1,021,541 + MPMX20_00969 0.36 +0.4 1,021,554 - MPMX20_00969 0.37 +0.1 1,021,558 + MPMX20_00969 0.37 -3.1 1,021,630 - MPMX20_00969 0.44 -0.3 1,021,722 - MPMX20_00969 0.52 -1.8 1,021,744 + MPMX20_00969 0.54 +1.9 1,021,749 + MPMX20_00969 0.54 +1.9 1,021,749 + MPMX20_00969 0.54 +0.1 1,021,754 + MPMX20_00969 0.55 -0.7 1,021,789 + MPMX20_00969 0.58 -3.8 1,021,797 - MPMX20_00969 0.59 -1.0 1,021,797 - MPMX20_00969 0.59 +0.9 1,021,807 - MPMX20_00969 0.60 +0.1 1,021,849 + MPMX20_00969 0.63 +2.2 1,021,857 + MPMX20_00969 0.64 -1.8 1,021,857 + MPMX20_00969 0.64 -1.3 1,021,865 - MPMX20_00969 0.65 -1.6 1,021,891 - MPMX20_00969 0.67 +1.9 1,021,935 + MPMX20_00969 0.71 +2.2 1,021,935 - MPMX20_00969 0.71 -1.1 1,021,996 + MPMX20_00969 0.77 +0.5 1,022,001 + MPMX20_00969 0.77 +1.1 1,022,024 + MPMX20_00969 0.79 -1.2 1,022,141 - -1.1
Or see this region's nucleotide sequence