Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00928 and MPMX20_00929 are separated by 111 nucleotides MPMX20_00929 and MPMX20_00930 are separated by 146 nucleotides MPMX20_00930 and MPMX20_00931 are separated by 571 nucleotides
MPMX20_00928: MPMX20_00928 - Gamma-glutamyl phosphate reductase, at 976,929 to 978,182
_00928
MPMX20_00929: MPMX20_00929 - tRNA-Thr, at 978,294 to 978,369
_00929
MPMX20_00930: MPMX20_00930 - hypothetical protein, at 978,516 to 978,788
_00930
MPMX20_00931: MPMX20_00931 - hypothetical protein, at 979,360 to 980,208
_00931
Position (kb) 978
979 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 977.392 kb on - strand, within MPMX20_00928 at 977.415 kb on + strand, within MPMX20_00928 at 977.452 kb on - strand, within MPMX20_00928 at 977.460 kb on + strand, within MPMX20_00928 at 977.462 kb on - strand, within MPMX20_00928 at 977.546 kb on - strand, within MPMX20_00928 at 977.562 kb on - strand, within MPMX20_00928 at 977.590 kb on + strand, within MPMX20_00928 at 977.613 kb on + strand, within MPMX20_00928 at 977.626 kb on - strand, within MPMX20_00928 at 977.630 kb on + strand, within MPMX20_00928 at 977.756 kb on - strand, within MPMX20_00928 at 977.760 kb on + strand, within MPMX20_00928 at 977.807 kb on + strand, within MPMX20_00928 at 977.807 kb on + strand, within MPMX20_00928 at 977.815 kb on - strand, within MPMX20_00928 at 977.815 kb on - strand, within MPMX20_00928 at 977.842 kb on + strand, within MPMX20_00928 at 977.884 kb on + strand, within MPMX20_00928 at 977.902 kb on + strand, within MPMX20_00928 at 977.919 kb on + strand, within MPMX20_00928 at 977.924 kb on + strand, within MPMX20_00928 at 977.927 kb on - strand, within MPMX20_00928 at 977.927 kb on - strand, within MPMX20_00928 at 977.940 kb on + strand, within MPMX20_00928 at 977.965 kb on + strand, within MPMX20_00928 at 977.973 kb on - strand, within MPMX20_00928 at 977.973 kb on - strand, within MPMX20_00928 at 977.973 kb on - strand, within MPMX20_00928 at 977.975 kb on + strand, within MPMX20_00928 at 977.983 kb on - strand, within MPMX20_00928 at 978.008 kb on + strand, within MPMX20_00928 at 978.016 kb on - strand, within MPMX20_00928 at 978.018 kb on + strand, within MPMX20_00928 at 978.018 kb on - strand, within MPMX20_00928 at 978.018 kb on - strand, within MPMX20_00928 at 978.031 kb on - strand, within MPMX20_00928 at 978.076 kb on - strand at 978.111 kb on + strand at 978.111 kb on + strand at 978.129 kb on + strand at 978.131 kb on + strand at 978.136 kb on + strand at 978.139 kb on + strand at 978.142 kb on - strand at 978.165 kb on + strand at 978.242 kb on + strand at 978.247 kb on + strand at 978.247 kb on + strand at 978.255 kb on - strand at 978.318 kb on - strand, within MPMX20_00929 at 978.346 kb on - strand, within MPMX20_00929 at 978.348 kb on - strand, within MPMX20_00929 at 978.354 kb on + strand, within MPMX20_00929 at 978.379 kb on - strand at 978.418 kb on + strand at 978.492 kb on - strand at 978.500 kb on + strand at 978.500 kb on + strand at 978.500 kb on + strand at 978.506 kb on - strand at 978.507 kb on + strand at 978.508 kb on - strand at 978.508 kb on - strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.543 kb on + strand at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.545 kb on + strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.551 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.553 kb on - strand, within MPMX20_00930 at 978.576 kb on - strand, within MPMX20_00930 at 978.577 kb on + strand, within MPMX20_00930 at 978.600 kb on + strand, within MPMX20_00930 at 978.600 kb on + strand, within MPMX20_00930 at 978.610 kb on - strand, within MPMX20_00930 at 978.610 kb on - strand, within MPMX20_00930 at 978.624 kb on - strand, within MPMX20_00930 at 978.648 kb on - strand, within MPMX20_00930 at 978.670 kb on + strand, within MPMX20_00930 at 978.670 kb on + strand, within MPMX20_00930 at 978.670 kb on + strand, within MPMX20_00930 at 978.670 kb on + strand, within MPMX20_00930 at 978.674 kb on - strand, within MPMX20_00930 at 978.674 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.678 kb on - strand, within MPMX20_00930 at 978.685 kb on + strand, within MPMX20_00930 at 978.685 kb on - strand, within MPMX20_00930 at 978.769 kb on - strand at 978.771 kb on + strand at 978.820 kb on + strand at 978.843 kb on - strand at 978.901 kb on - strand at 978.970 kb on + strand at 978.970 kb on + strand at 978.970 kb on + strand at 979.016 kb on + strand at 979.016 kb on + strand at 979.023 kb on + strand at 979.035 kb on + strand at 979.041 kb on + strand at 979.048 kb on + strand at 979.048 kb on + strand at 979.059 kb on + strand at 979.059 kb on + strand at 979.063 kb on + strand at 979.115 kb on + strand at 979.115 kb on + strand at 979.115 kb on + strand at 979.115 kb on + strand at 979.120 kb on + strand at 979.120 kb on + strand at 979.120 kb on + strand at 979.120 kb on + strand at 979.120 kb on + strand at 979.125 kb on + strand at 979.125 kb on + strand at 979.125 kb on + strand at 979.125 kb on + strand at 979.125 kb on + strand at 979.125 kb on + strand at 979.127 kb on + strand at 979.127 kb on + strand at 979.130 kb on + strand at 979.130 kb on + strand at 979.130 kb on + strand at 979.135 kb on + strand at 979.135 kb on + strand at 979.150 kb on + strand at 979.150 kb on + strand at 979.150 kb on + strand at 979.150 kb on + strand at 979.150 kb on + strand at 979.150 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.151 kb on + strand at 979.156 kb on + strand at 979.156 kb on + strand at 979.156 kb on + strand at 979.156 kb on + strand at 979.156 kb on + strand at 979.156 kb on + strand at 979.164 kb on + strand at 979.166 kb on + strand at 979.166 kb on + strand at 979.166 kb on + strand at 979.166 kb on + strand at 979.191 kb on + strand at 979.201 kb on + strand at 979.201 kb on + strand at 979.201 kb on + strand at 979.202 kb on + strand at 979.245 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 977,392 - MPMX20_00928 0.37 -2.6 977,415 + MPMX20_00928 0.39 +0.9 977,452 - MPMX20_00928 0.42 -0.6 977,460 + MPMX20_00928 0.42 -2.6 977,462 - MPMX20_00928 0.43 -3.5 977,546 - MPMX20_00928 0.49 -1.4 977,562 - MPMX20_00928 0.50 +0.1 977,590 + MPMX20_00928 0.53 +1.0 977,613 + MPMX20_00928 0.55 -3.3 977,626 - MPMX20_00928 0.56 -0.7 977,630 + MPMX20_00928 0.56 -2.3 977,756 - MPMX20_00928 0.66 -0.2 977,760 + MPMX20_00928 0.66 -1.6 977,807 + MPMX20_00928 0.70 -1.1 977,807 + MPMX20_00928 0.70 -0.2 977,815 - MPMX20_00928 0.71 -3.3 977,815 - MPMX20_00928 0.71 +1.0 977,842 + MPMX20_00928 0.73 -0.9 977,884 + MPMX20_00928 0.76 +0.7 977,902 + MPMX20_00928 0.78 -2.0 977,919 + MPMX20_00928 0.79 -1.0 977,924 + MPMX20_00928 0.79 -1.7 977,927 - MPMX20_00928 0.80 -0.7 977,927 - MPMX20_00928 0.80 +0.1 977,940 + MPMX20_00928 0.81 -3.4 977,965 + MPMX20_00928 0.83 -0.5 977,973 - MPMX20_00928 0.83 +0.4 977,973 - MPMX20_00928 0.83 -1.6 977,973 - MPMX20_00928 0.83 -0.9 977,975 + MPMX20_00928 0.83 -3.9 977,983 - MPMX20_00928 0.84 +1.6 978,008 + MPMX20_00928 0.86 -1.9 978,016 - MPMX20_00928 0.87 +0.5 978,018 + MPMX20_00928 0.87 +0.8 978,018 - MPMX20_00928 0.87 -1.6 978,018 - MPMX20_00928 0.87 -0.7 978,031 - MPMX20_00928 0.88 -1.2 978,076 - +2.5 978,111 + -0.7 978,111 + +0.1 978,129 + -3.0 978,131 + -3.5 978,136 + -0.5 978,139 + -1.6 978,142 - -1.2 978,165 + +0.8 978,242 + -1.2 978,247 + -1.2 978,247 + -0.1 978,255 - +0.6 978,318 - MPMX20_00929 0.32 -2.1 978,346 - MPMX20_00929 0.68 -1.9 978,348 - MPMX20_00929 0.71 -0.6 978,354 + MPMX20_00929 0.79 -2.3 978,379 - +1.0 978,418 + +1.7 978,492 - -1.4 978,500 + +0.8 978,500 + -1.7 978,500 + -1.1 978,506 - -0.7 978,507 + -3.5 978,508 - -0.9 978,508 - +0.6 978,543 + -0.7 978,543 + -1.5 978,543 + +2.1 978,543 + -0.2 978,543 + -4.6 978,543 + +0.7 978,543 + -0.5 978,543 + -0.1 978,545 + MPMX20_00930 0.11 -0.7 978,545 + MPMX20_00930 0.11 +0.1 978,545 + MPMX20_00930 0.11 -2.1 978,545 + MPMX20_00930 0.11 +0.1 978,545 + MPMX20_00930 0.11 -0.6 978,545 + MPMX20_00930 0.11 +0.4 978,545 + MPMX20_00930 0.11 -3.1 978,545 + MPMX20_00930 0.11 -2.9 978,545 + MPMX20_00930 0.11 -1.1 978,551 - MPMX20_00930 0.13 -0.1 978,551 - MPMX20_00930 0.13 +0.2 978,551 - MPMX20_00930 0.13 -3.0 978,551 - MPMX20_00930 0.13 +0.1 978,551 - MPMX20_00930 0.13 +0.2 978,551 - MPMX20_00930 0.13 +0.1 978,551 - MPMX20_00930 0.13 -3.7 978,551 - MPMX20_00930 0.13 +0.8 978,551 - MPMX20_00930 0.13 -0.5 978,551 - MPMX20_00930 0.13 -1.1 978,551 - MPMX20_00930 0.13 -0.3 978,551 - MPMX20_00930 0.13 +0.7 978,553 - MPMX20_00930 0.14 -2.7 978,553 - MPMX20_00930 0.14 +0.8 978,553 - MPMX20_00930 0.14 +1.7 978,553 - MPMX20_00930 0.14 -1.8 978,553 - MPMX20_00930 0.14 +0.1 978,553 - MPMX20_00930 0.14 -0.4 978,553 - MPMX20_00930 0.14 -1.5 978,553 - MPMX20_00930 0.14 +0.8 978,553 - MPMX20_00930 0.14 +1.1 978,553 - MPMX20_00930 0.14 -0.5 978,553 - MPMX20_00930 0.14 -3.1 978,553 - MPMX20_00930 0.14 +1.4 978,553 - MPMX20_00930 0.14 +0.5 978,553 - MPMX20_00930 0.14 +0.2 978,553 - MPMX20_00930 0.14 +0.1 978,553 - MPMX20_00930 0.14 -0.0 978,553 - MPMX20_00930 0.14 -2.8 978,553 - MPMX20_00930 0.14 +1.5 978,553 - MPMX20_00930 0.14 +1.3 978,553 - MPMX20_00930 0.14 +0.8 978,576 - MPMX20_00930 0.22 -0.5 978,577 + MPMX20_00930 0.22 -0.5 978,600 + MPMX20_00930 0.31 -2.1 978,600 + MPMX20_00930 0.31 +1.8 978,610 - MPMX20_00930 0.34 +0.1 978,610 - MPMX20_00930 0.34 -1.3 978,624 - MPMX20_00930 0.40 +0.2 978,648 - MPMX20_00930 0.48 -2.4 978,670 + MPMX20_00930 0.56 -1.5 978,670 + MPMX20_00930 0.56 +4.9 978,670 + MPMX20_00930 0.56 -1.2 978,670 + MPMX20_00930 0.56 -1.6 978,674 - MPMX20_00930 0.58 -2.1 978,674 - MPMX20_00930 0.58 -1.9 978,678 - MPMX20_00930 0.59 +2.0 978,678 - MPMX20_00930 0.59 -2.2 978,678 - MPMX20_00930 0.59 -0.7 978,678 - MPMX20_00930 0.59 -0.9 978,678 - MPMX20_00930 0.59 -1.2 978,678 - MPMX20_00930 0.59 -2.2 978,678 - MPMX20_00930 0.59 -2.6 978,678 - MPMX20_00930 0.59 +1.1 978,678 - MPMX20_00930 0.59 -0.9 978,678 - MPMX20_00930 0.59 -1.5 978,678 - MPMX20_00930 0.59 -2.2 978,678 - MPMX20_00930 0.59 -0.9 978,685 + MPMX20_00930 0.62 +0.5 978,685 - MPMX20_00930 0.62 +0.8 978,769 - +1.0 978,771 + +1.9 978,820 + -0.9 978,843 - -1.2 978,901 - +2.9 978,970 + -0.2 978,970 + +0.6 978,970 + -2.2 979,016 + +0.4 979,016 + -0.7 979,023 + +3.4 979,035 + -3.3 979,041 + -0.0 979,048 + +0.5 979,048 + -0.4 979,059 + -1.8 979,059 + +1.5 979,063 + -3.4 979,115 + +0.7 979,115 + +1.8 979,115 + -0.5 979,115 + +0.2 979,120 + +0.3 979,120 + -1.9 979,120 + -0.6 979,120 + -2.9 979,120 + +1.1 979,125 + -3.3 979,125 + -1.3 979,125 + -3.5 979,125 + +1.1 979,125 + -2.0 979,125 + +0.9 979,127 + +0.4 979,127 + -2.8 979,130 + +0.9 979,130 + +0.1 979,130 + -1.3 979,135 + +1.3 979,135 + +0.9 979,150 + -1.2 979,150 + -0.0 979,150 + -1.3 979,150 + +0.1 979,150 + +0.3 979,150 + -1.2 979,151 + -3.9 979,151 + -1.3 979,151 + -2.3 979,151 + -0.2 979,151 + -3.7 979,151 + +1.3 979,151 + -1.5 979,151 + +0.0 979,151 + -3.0 979,151 + +0.7 979,151 + -0.7 979,151 + +0.1 979,151 + +0.7 979,151 + +0.0 979,151 + +0.6 979,151 + -2.3 979,156 + -0.5 979,156 + -3.5 979,156 + -0.7 979,156 + -1.3 979,156 + -1.9 979,156 + -2.5 979,164 + +1.3 979,166 + -1.1 979,166 + +1.2 979,166 + -0.9 979,166 + -2.3 979,191 + -1.7 979,201 + +2.1 979,201 + -3.1 979,201 + -0.7 979,202 + -1.3 979,245 + +0.7
Or see this region's nucleotide sequence