Experiment: L-Sorbose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00720 and MPMX20_00721 are separated by 87 nucleotides MPMX20_00721 and MPMX20_00722 are separated by 182 nucleotides
MPMX20_00720: MPMX20_00720 - Chaperone protein DnaK, at 742,837 to 744,750
_00720
MPMX20_00721: MPMX20_00721 - Chaperone protein DnaJ, at 744,838 to 745,983
_00721
MPMX20_00722: MPMX20_00722 - Na(+)/H(+) antiporter NhaA, at 746,166 to 747,341
_00722
Position (kb) 744
745
746 Strain fitness (log2 ratio) -2
-1
0
1
2 at 744.347 kb on + strand, within MPMX20_00720 at 744.347 kb on + strand, within MPMX20_00720 at 744.533 kb on + strand, within MPMX20_00720 at 744.609 kb on + strand at 744.666 kb on + strand at 744.783 kb on + strand at 745.235 kb on - strand, within MPMX20_00721 at 745.409 kb on + strand, within MPMX20_00721 at 745.412 kb on - strand, within MPMX20_00721 at 745.445 kb on - strand, within MPMX20_00721 at 745.456 kb on + strand, within MPMX20_00721 at 745.554 kb on - strand, within MPMX20_00721 at 745.636 kb on + strand, within MPMX20_00721 at 745.644 kb on - strand, within MPMX20_00721 at 745.737 kb on - strand, within MPMX20_00721 at 745.816 kb on - strand, within MPMX20_00721 at 745.977 kb on - strand at 746.122 kb on + strand at 746.123 kb on + strand at 746.154 kb on + strand at 746.156 kb on - strand at 746.162 kb on - strand at 746.162 kb on - strand at 746.209 kb on + strand at 746.252 kb on - strand at 746.345 kb on + strand, within MPMX20_00722 at 746.399 kb on + strand, within MPMX20_00722 at 746.587 kb on - strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.684 kb on + strand, within MPMX20_00722 at 746.685 kb on + strand, within MPMX20_00722 at 746.692 kb on - strand, within MPMX20_00722 at 746.692 kb on - strand, within MPMX20_00722 at 746.692 kb on - strand, within MPMX20_00722 at 746.800 kb on + strand, within MPMX20_00722 at 746.923 kb on - strand, within MPMX20_00722
Per-strain Table
Position Strand Gene LocusTag Fraction L-Sorbose (C) remove 744,347 + MPMX20_00720 0.79 +1.3 744,347 + MPMX20_00720 0.79 -2.0 744,533 + MPMX20_00720 0.89 +2.1 744,609 + +2.5 744,666 + +1.6 744,783 + +0.5 745,235 - MPMX20_00721 0.35 +0.7 745,409 + MPMX20_00721 0.50 -0.5 745,412 - MPMX20_00721 0.50 -1.6 745,445 - MPMX20_00721 0.53 +1.4 745,456 + MPMX20_00721 0.54 -2.0 745,554 - MPMX20_00721 0.62 -1.4 745,636 + MPMX20_00721 0.70 -2.5 745,644 - MPMX20_00721 0.70 -1.2 745,737 - MPMX20_00721 0.78 +1.3 745,816 - MPMX20_00721 0.85 -1.3 745,977 - +1.2 746,122 + +0.0 746,123 + -2.4 746,154 + -2.3 746,156 - -2.6 746,162 - +0.3 746,162 - -2.1 746,209 + +0.2 746,252 - -2.7 746,345 + MPMX20_00722 0.15 -0.4 746,399 + MPMX20_00722 0.20 +2.4 746,587 - MPMX20_00722 0.36 -0.2 746,684 + MPMX20_00722 0.44 -1.8 746,684 + MPMX20_00722 0.44 +0.1 746,684 + MPMX20_00722 0.44 -0.9 746,684 + MPMX20_00722 0.44 +2.4 746,684 + MPMX20_00722 0.44 +0.6 746,684 + MPMX20_00722 0.44 +1.5 746,685 + MPMX20_00722 0.44 -0.3 746,692 - MPMX20_00722 0.45 +1.3 746,692 - MPMX20_00722 0.45 +0.3 746,692 - MPMX20_00722 0.45 -1.3 746,800 + MPMX20_00722 0.54 -0.7 746,923 - MPMX20_00722 0.64 -1.6
Or see this region's nucleotide sequence