Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02955

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02954 and MPMX20_02955 are separated by 178 nucleotidesMPMX20_02955 and MPMX20_02956 overlap by 29 nucleotidesMPMX20_02956 and MPMX20_02957 overlap by 20 nucleotides MPMX20_02954: MPMX20_02954 - Inner membrane protein YedI, at 3,080,250 to 3,081,161 _02954 MPMX20_02955: MPMX20_02955 - putative inner membrane transporter YedA, at 3,081,340 to 3,082,254 _02955 MPMX20_02956: MPMX20_02956 - Very short patch repair protein, at 3,082,226 to 3,082,717 _02956 MPMX20_02957: MPMX20_02957 - DNA-cytosine methyltransferase, at 3,082,698 to 3,084,113 _02957 Position (kb) 3081 3082 3083Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3080.365 kb on - strand, within MPMX20_02954at 3080.367 kb on + strand, within MPMX20_02954at 3080.367 kb on + strand, within MPMX20_02954at 3080.370 kb on - strand, within MPMX20_02954at 3080.375 kb on - strand, within MPMX20_02954at 3080.375 kb on - strand, within MPMX20_02954at 3080.403 kb on - strand, within MPMX20_02954at 3080.416 kb on + strand, within MPMX20_02954at 3080.461 kb on + strand, within MPMX20_02954at 3080.466 kb on - strand, within MPMX20_02954at 3080.473 kb on - strand, within MPMX20_02954at 3080.480 kb on + strand, within MPMX20_02954at 3080.573 kb on + strand, within MPMX20_02954at 3080.573 kb on + strand, within MPMX20_02954at 3080.573 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.603 kb on + strand, within MPMX20_02954at 3080.609 kb on - strand, within MPMX20_02954at 3080.739 kb on - strand, within MPMX20_02954at 3080.762 kb on - strand, within MPMX20_02954at 3080.788 kb on - strand, within MPMX20_02954at 3080.817 kb on + strand, within MPMX20_02954at 3080.920 kb on - strand, within MPMX20_02954at 3080.925 kb on + strand, within MPMX20_02954at 3080.933 kb on - strand, within MPMX20_02954at 3080.933 kb on - strand, within MPMX20_02954at 3080.978 kb on - strand, within MPMX20_02954at 3080.983 kb on + strand, within MPMX20_02954at 3081.019 kb on + strand, within MPMX20_02954at 3081.027 kb on - strand, within MPMX20_02954at 3081.027 kb on - strand, within MPMX20_02954at 3081.027 kb on - strand, within MPMX20_02954at 3081.037 kb on - strand, within MPMX20_02954at 3081.059 kb on + strand, within MPMX20_02954at 3081.105 kb on - strandat 3081.125 kb on - strandat 3081.147 kb on - strandat 3081.207 kb on - strandat 3081.212 kb on - strandat 3081.266 kb on + strandat 3081.266 kb on + strandat 3081.274 kb on - strandat 3081.274 kb on - strandat 3081.343 kb on - strandat 3081.343 kb on - strandat 3081.395 kb on - strandat 3081.435 kb on + strand, within MPMX20_02955at 3081.515 kb on + strand, within MPMX20_02955at 3081.548 kb on + strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.598 kb on - strand, within MPMX20_02955at 3081.598 kb on - strand, within MPMX20_02955at 3081.667 kb on + strand, within MPMX20_02955at 3081.716 kb on + strand, within MPMX20_02955at 3081.717 kb on + strand, within MPMX20_02955at 3081.736 kb on - strand, within MPMX20_02955at 3081.743 kb on + strand, within MPMX20_02955at 3081.753 kb on + strand, within MPMX20_02955at 3081.772 kb on - strand, within MPMX20_02955at 3081.838 kb on + strand, within MPMX20_02955at 3081.905 kb on + strand, within MPMX20_02955at 3081.936 kb on - strand, within MPMX20_02955at 3081.956 kb on + strand, within MPMX20_02955at 3081.989 kb on + strand, within MPMX20_02955at 3082.002 kb on - strand, within MPMX20_02955at 3082.093 kb on - strand, within MPMX20_02955at 3082.168 kb on - strandat 3082.183 kb on - strandat 3082.258 kb on + strandat 3082.345 kb on + strand, within MPMX20_02956at 3082.345 kb on + strand, within MPMX20_02956at 3082.353 kb on - strand, within MPMX20_02956at 3082.370 kb on + strand, within MPMX20_02956at 3082.378 kb on - strand, within MPMX20_02956at 3082.378 kb on - strand, within MPMX20_02956at 3082.389 kb on + strand, within MPMX20_02956at 3082.389 kb on + strand, within MPMX20_02956at 3082.389 kb on + strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.430 kb on - strand, within MPMX20_02956at 3082.442 kb on - strand, within MPMX20_02956at 3082.523 kb on + strand, within MPMX20_02956at 3082.546 kb on + strand, within MPMX20_02956at 3082.592 kb on - strand, within MPMX20_02956at 3082.625 kb on - strand, within MPMX20_02956at 3082.686 kb on - strandat 3082.721 kb on - strandat 3082.737 kb on - strandat 3082.749 kb on - strandat 3082.827 kb on + strandat 3082.828 kb on + strandat 3082.828 kb on + strandat 3082.835 kb on - strandat 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.873 kb on + strand, within MPMX20_02957at 3082.897 kb on + strand, within MPMX20_02957at 3082.907 kb on + strand, within MPMX20_02957at 3082.907 kb on + strand, within MPMX20_02957at 3082.907 kb on + strand, within MPMX20_02957at 3082.915 kb on - strand, within MPMX20_02957at 3082.915 kb on - strand, within MPMX20_02957at 3083.005 kb on - strand, within MPMX20_02957at 3083.017 kb on - strand, within MPMX20_02957at 3083.046 kb on + strand, within MPMX20_02957at 3083.135 kb on + strand, within MPMX20_02957at 3083.135 kb on + strand, within MPMX20_02957at 3083.143 kb on - strand, within MPMX20_02957at 3083.197 kb on - strand, within MPMX20_02957at 3083.197 kb on - strand, within MPMX20_02957at 3083.207 kb on + strand, within MPMX20_02957at 3083.239 kb on - strand, within MPMX20_02957at 3083.239 kb on - strand, within MPMX20_02957at 3083.239 kb on - strand, within MPMX20_02957at 3083.242 kb on - strand, within MPMX20_02957at 3083.249 kb on + strand, within MPMX20_02957at 3083.249 kb on + strand, within MPMX20_02957at 3083.249 kb on + strand, within MPMX20_02957

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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3,080,365 - MPMX20_02954 0.13 +1.1
3,080,367 + MPMX20_02954 0.13 -0.8
3,080,367 + MPMX20_02954 0.13 -0.6
3,080,370 - MPMX20_02954 0.13 -0.5
3,080,375 - MPMX20_02954 0.14 +1.4
3,080,375 - MPMX20_02954 0.14 +0.5
3,080,403 - MPMX20_02954 0.17 +0.8
3,080,416 + MPMX20_02954 0.18 -1.0
3,080,461 + MPMX20_02954 0.23 +0.4
3,080,466 - MPMX20_02954 0.24 -0.0
3,080,473 - MPMX20_02954 0.24 -0.2
3,080,480 + MPMX20_02954 0.25 +0.4
3,080,573 + MPMX20_02954 0.35 -0.2
3,080,573 + MPMX20_02954 0.35 -0.1
3,080,573 + MPMX20_02954 0.35 -0.1
3,080,603 + MPMX20_02954 0.39 +0.1
3,080,603 + MPMX20_02954 0.39 -0.0
3,080,603 + MPMX20_02954 0.39 +0.1
3,080,603 + MPMX20_02954 0.39 -1.5
3,080,603 + MPMX20_02954 0.39 +1.0
3,080,603 + MPMX20_02954 0.39 +0.7
3,080,603 + MPMX20_02954 0.39 +0.3
3,080,609 - MPMX20_02954 0.39 -0.3
3,080,739 - MPMX20_02954 0.54 -1.0
3,080,762 - MPMX20_02954 0.56 +1.0
3,080,788 - MPMX20_02954 0.59 -0.1
3,080,817 + MPMX20_02954 0.62 -0.8
3,080,920 - MPMX20_02954 0.73 -0.2
3,080,925 + MPMX20_02954 0.74 +0.1
3,080,933 - MPMX20_02954 0.75 -1.0
3,080,933 - MPMX20_02954 0.75 -1.1
3,080,978 - MPMX20_02954 0.80 +1.2
3,080,983 + MPMX20_02954 0.80 +0.8
3,081,019 + MPMX20_02954 0.84 -0.0
3,081,027 - MPMX20_02954 0.85 +0.8
3,081,027 - MPMX20_02954 0.85 +2.0
3,081,027 - MPMX20_02954 0.85 +1.0
3,081,037 - MPMX20_02954 0.86 +1.1
3,081,059 + MPMX20_02954 0.89 +0.0
3,081,105 - -1.1
3,081,125 - -0.2
3,081,147 - +0.4
3,081,207 - -0.8
3,081,212 - -0.9
3,081,266 + -0.6
3,081,266 + +0.4
3,081,274 - -0.4
3,081,274 - +0.5
3,081,343 - +0.6
3,081,343 - +0.6
3,081,395 - -0.5
3,081,435 + MPMX20_02955 0.10 -1.7
3,081,515 + MPMX20_02955 0.19 -0.6
3,081,548 + MPMX20_02955 0.23 -0.1
3,081,551 - MPMX20_02955 0.23 +0.1
3,081,551 - MPMX20_02955 0.23 -0.3
3,081,551 - MPMX20_02955 0.23 +0.0
3,081,551 - MPMX20_02955 0.23 +0.4
3,081,598 - MPMX20_02955 0.28 +0.6
3,081,598 - MPMX20_02955 0.28 -0.3
3,081,667 + MPMX20_02955 0.36 +0.7
3,081,716 + MPMX20_02955 0.41 +0.2
3,081,717 + MPMX20_02955 0.41 -0.6
3,081,736 - MPMX20_02955 0.43 +1.0
3,081,743 + MPMX20_02955 0.44 +0.6
3,081,753 + MPMX20_02955 0.45 +0.4
3,081,772 - MPMX20_02955 0.47 -0.4
3,081,838 + MPMX20_02955 0.54 -0.9
3,081,905 + MPMX20_02955 0.62 +0.5
3,081,936 - MPMX20_02955 0.65 -0.1
3,081,956 + MPMX20_02955 0.67 -0.2
3,081,989 + MPMX20_02955 0.71 -0.5
3,082,002 - MPMX20_02955 0.72 -0.2
3,082,093 - MPMX20_02955 0.82 +0.9
3,082,168 - +1.5
3,082,183 - -2.1
3,082,258 + -0.4
3,082,345 + MPMX20_02956 0.24 -0.8
3,082,345 + MPMX20_02956 0.24 -0.2
3,082,353 - MPMX20_02956 0.26 +0.6
3,082,370 + MPMX20_02956 0.29 +0.6
3,082,378 - MPMX20_02956 0.31 +1.5
3,082,378 - MPMX20_02956 0.31 +0.3
3,082,389 + MPMX20_02956 0.33 -0.4
3,082,389 + MPMX20_02956 0.33 -0.7
3,082,389 + MPMX20_02956 0.33 -0.7
3,082,397 - MPMX20_02956 0.35 +0.6
3,082,397 - MPMX20_02956 0.35 +1.2
3,082,397 - MPMX20_02956 0.35 +0.4
3,082,397 - MPMX20_02956 0.35 -0.2
3,082,417 + MPMX20_02956 0.39 -0.2
3,082,417 + MPMX20_02956 0.39 -0.5
3,082,417 + MPMX20_02956 0.39 -0.1
3,082,417 + MPMX20_02956 0.39 -0.5
3,082,430 - MPMX20_02956 0.41 +0.9
3,082,442 - MPMX20_02956 0.44 -1.4
3,082,523 + MPMX20_02956 0.60 -1.0
3,082,546 + MPMX20_02956 0.65 +3.6
3,082,592 - MPMX20_02956 0.74 +0.4
3,082,625 - MPMX20_02956 0.81 +1.6
3,082,686 - +0.7
3,082,721 - +0.4
3,082,737 - +0.3
3,082,749 - -0.9
3,082,827 + -0.1
3,082,828 + -0.3
3,082,828 + -0.1
3,082,835 - -0.6
3,082,858 + MPMX20_02957 0.11 -1.7
3,082,858 + MPMX20_02957 0.11 -1.2
3,082,858 + MPMX20_02957 0.11 -0.8
3,082,858 + MPMX20_02957 0.11 -1.6
3,082,858 + MPMX20_02957 0.11 -1.5
3,082,858 + MPMX20_02957 0.11 -0.0
3,082,858 + MPMX20_02957 0.11 -0.2
3,082,858 + MPMX20_02957 0.11 -1.3
3,082,866 - MPMX20_02957 0.12 -0.5
3,082,866 - MPMX20_02957 0.12 -0.5
3,082,866 - MPMX20_02957 0.12 -0.4
3,082,866 - MPMX20_02957 0.12 -0.5
3,082,866 - MPMX20_02957 0.12 -0.3
3,082,866 - MPMX20_02957 0.12 +0.8
3,082,866 - MPMX20_02957 0.12 +0.3
3,082,866 - MPMX20_02957 0.12 -1.9
3,082,873 + MPMX20_02957 0.12 -1.1
3,082,897 + MPMX20_02957 0.14 -0.7
3,082,907 + MPMX20_02957 0.15 -1.2
3,082,907 + MPMX20_02957 0.15 +0.6
3,082,907 + MPMX20_02957 0.15 +0.1
3,082,915 - MPMX20_02957 0.15 +1.1
3,082,915 - MPMX20_02957 0.15 +0.9
3,083,005 - MPMX20_02957 0.22 -0.5
3,083,017 - MPMX20_02957 0.23 +0.2
3,083,046 + MPMX20_02957 0.25 -1.4
3,083,135 + MPMX20_02957 0.31 +0.5
3,083,135 + MPMX20_02957 0.31 -0.1
3,083,143 - MPMX20_02957 0.31 -0.8
3,083,197 - MPMX20_02957 0.35 -0.0
3,083,197 - MPMX20_02957 0.35 +1.2
3,083,207 + MPMX20_02957 0.36 -2.1
3,083,239 - MPMX20_02957 0.38 +0.1
3,083,239 - MPMX20_02957 0.38 -1.2
3,083,239 - MPMX20_02957 0.38 +0.3
3,083,242 - MPMX20_02957 0.38 +0.6
3,083,249 + MPMX20_02957 0.39 -0.7
3,083,249 + MPMX20_02957 0.39 +0.3
3,083,249 + MPMX20_02957 0.39 -1.8

Or see this region's nucleotide sequence