Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02295

Experiment: D-Arabinose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02294 and MPMX20_02295 are separated by 699 nucleotidesMPMX20_02295 and MPMX20_02296 are separated by 73 nucleotidesMPMX20_02296 and MPMX20_02297 overlap by 4 nucleotides MPMX20_02294: MPMX20_02294 - hypothetical protein, at 2,405,831 to 2,406,391 _02294 MPMX20_02295: MPMX20_02295 - hypothetical protein, at 2,407,091 to 2,407,273 _02295 MPMX20_02296: MPMX20_02296 - hypothetical protein, at 2,407,347 to 2,408,054 _02296 MPMX20_02297: MPMX20_02297 - hypothetical protein, at 2,408,051 to 2,408,632 _02297 Position (kb) 2407 2408Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2406.461 kb on - strandat 2406.465 kb on - strandat 2406.544 kb on - strandat 2406.804 kb on - strandat 2406.805 kb on - strandat 2406.805 kb on - strandat 2406.808 kb on - strandat 2406.818 kb on - strandat 2406.825 kb on - strandat 2406.825 kb on - strandat 2406.835 kb on - strandat 2406.841 kb on - strandat 2406.841 kb on - strandat 2406.984 kb on - strandat 2406.997 kb on + strandat 2407.023 kb on - strandat 2407.227 kb on - strand, within MPMX20_02295at 2407.251 kb on + strand, within MPMX20_02295at 2407.256 kb on + strandat 2407.256 kb on + strandat 2407.258 kb on + strandat 2407.258 kb on + strandat 2407.275 kb on + strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.398 kb on - strandat 2407.416 kb on - strandat 2407.416 kb on - strandat 2407.416 kb on - strandat 2407.416 kb on - strandat 2407.416 kb on - strandat 2407.416 kb on - strandat 2407.416 kb on - strandat 2407.430 kb on - strand, within MPMX20_02296at 2407.433 kb on - strand, within MPMX20_02296at 2407.462 kb on + strand, within MPMX20_02296at 2407.464 kb on + strand, within MPMX20_02296at 2407.464 kb on + strand, within MPMX20_02296at 2407.464 kb on + strand, within MPMX20_02296at 2407.464 kb on + strand, within MPMX20_02296at 2407.472 kb on - strand, within MPMX20_02296at 2407.472 kb on - strand, within MPMX20_02296at 2407.472 kb on - strand, within MPMX20_02296at 2407.472 kb on - strand, within MPMX20_02296at 2407.518 kb on - strand, within MPMX20_02296at 2407.526 kb on + strand, within MPMX20_02296at 2407.526 kb on + strand, within MPMX20_02296at 2407.526 kb on + strand, within MPMX20_02296at 2407.528 kb on - strand, within MPMX20_02296at 2407.534 kb on - strand, within MPMX20_02296at 2407.534 kb on - strand, within MPMX20_02296at 2407.544 kb on - strand, within MPMX20_02296at 2407.577 kb on + strand, within MPMX20_02296at 2407.585 kb on - strand, within MPMX20_02296at 2407.667 kb on - strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.706 kb on + strand, within MPMX20_02296at 2407.714 kb on - strand, within MPMX20_02296at 2407.714 kb on - strand, within MPMX20_02296at 2407.714 kb on - strand, within MPMX20_02296at 2407.720 kb on - strand, within MPMX20_02296at 2407.772 kb on - strand, within MPMX20_02296at 2407.822 kb on + strand, within MPMX20_02296at 2407.832 kb on + strand, within MPMX20_02296at 2407.832 kb on + strand, within MPMX20_02296at 2407.832 kb on + strand, within MPMX20_02296at 2407.837 kb on + strand, within MPMX20_02296at 2407.837 kb on + strand, within MPMX20_02296at 2407.840 kb on - strand, within MPMX20_02296at 2407.840 kb on - strand, within MPMX20_02296at 2407.841 kb on + strand, within MPMX20_02296at 2407.841 kb on + strand, within MPMX20_02296at 2407.845 kb on - strand, within MPMX20_02296at 2407.915 kb on + strand, within MPMX20_02296at 2407.915 kb on + strand, within MPMX20_02296at 2407.915 kb on + strand, within MPMX20_02296at 2407.923 kb on - strand, within MPMX20_02296at 2407.930 kb on - strand, within MPMX20_02296at 2407.938 kb on - strand, within MPMX20_02296at 2407.940 kb on - strand, within MPMX20_02296at 2407.953 kb on + strand, within MPMX20_02296at 2407.970 kb on + strand, within MPMX20_02296at 2407.998 kb on + strandat 2407.998 kb on + strandat 2407.998 kb on + strandat 2407.998 kb on + strandat 2407.998 kb on + strandat 2408.000 kb on + strandat 2408.000 kb on + strandat 2408.000 kb on + strandat 2408.000 kb on + strandat 2408.000 kb on + strandat 2408.000 kb on + strandat 2408.000 kb on + strandat 2408.006 kb on - strandat 2408.006 kb on - strandat 2408.006 kb on - strandat 2408.006 kb on - strandat 2408.006 kb on - strandat 2408.006 kb on - strandat 2408.006 kb on - strandat 2408.008 kb on - strandat 2408.008 kb on - strandat 2408.008 kb on - strandat 2408.008 kb on - strandat 2408.008 kb on - strandat 2408.008 kb on - strandat 2408.017 kb on + strandat 2408.025 kb on - strandat 2408.025 kb on - strandat 2408.035 kb on + strandat 2408.035 kb on + strandat 2408.035 kb on + strandat 2408.043 kb on - strandat 2408.043 kb on - strandat 2408.043 kb on - strandat 2408.043 kb on - strandat 2408.043 kb on - strandat 2408.043 kb on - strandat 2408.110 kb on - strand, within MPMX20_02297at 2408.116 kb on + strand, within MPMX20_02297at 2408.116 kb on + strand, within MPMX20_02297at 2408.116 kb on + strand, within MPMX20_02297at 2408.124 kb on - strand, within MPMX20_02297at 2408.124 kb on - strand, within MPMX20_02297at 2408.124 kb on - strand, within MPMX20_02297at 2408.124 kb on - strand, within MPMX20_02297at 2408.137 kb on + strand, within MPMX20_02297at 2408.154 kb on + strand, within MPMX20_02297at 2408.168 kb on - strand, within MPMX20_02297at 2408.209 kb on + strand, within MPMX20_02297at 2408.214 kb on + strand, within MPMX20_02297at 2408.258 kb on + strand, within MPMX20_02297at 2408.258 kb on + strand, within MPMX20_02297at 2408.258 kb on + strand, within MPMX20_02297at 2408.266 kb on - strand, within MPMX20_02297at 2408.266 kb on - strand, within MPMX20_02297

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Arabinose (C)
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2,406,461 - +1.3
2,406,465 - +0.1
2,406,544 - -1.0
2,406,804 - +1.6
2,406,805 - +2.2
2,406,805 - -2.1
2,406,808 - -2.0
2,406,818 - -1.3
2,406,825 - -1.3
2,406,825 - +0.3
2,406,835 - -1.9
2,406,841 - -1.3
2,406,841 - -1.7
2,406,984 - -2.0
2,406,997 + -2.6
2,407,023 - -2.0
2,407,227 - MPMX20_02295 0.74 -2.5
2,407,251 + MPMX20_02295 0.87 -4.1
2,407,256 + +0.9
2,407,256 + -0.8
2,407,258 + -0.7
2,407,258 + -0.7
2,407,275 + +0.7
2,407,398 - -0.2
2,407,398 - -0.6
2,407,398 - +1.5
2,407,398 - -2.8
2,407,398 - -1.3
2,407,398 - -1.5
2,407,398 - +0.2
2,407,398 - -1.5
2,407,398 - -0.7
2,407,398 - -2.7
2,407,416 - -1.1
2,407,416 - -2.8
2,407,416 - -1.4
2,407,416 - -1.9
2,407,416 - +3.3
2,407,416 - +0.9
2,407,416 - -0.3
2,407,430 - MPMX20_02296 0.12 -1.9
2,407,433 - MPMX20_02296 0.12 -2.0
2,407,462 + MPMX20_02296 0.16 -2.8
2,407,464 + MPMX20_02296 0.17 -2.5
2,407,464 + MPMX20_02296 0.17 -0.5
2,407,464 + MPMX20_02296 0.17 +0.4
2,407,464 + MPMX20_02296 0.17 +0.6
2,407,472 - MPMX20_02296 0.18 -2.0
2,407,472 - MPMX20_02296 0.18 +0.3
2,407,472 - MPMX20_02296 0.18 -2.0
2,407,472 - MPMX20_02296 0.18 +0.1
2,407,518 - MPMX20_02296 0.24 -1.0
2,407,526 + MPMX20_02296 0.25 -0.4
2,407,526 + MPMX20_02296 0.25 +0.4
2,407,526 + MPMX20_02296 0.25 -0.4
2,407,528 - MPMX20_02296 0.26 -2.9
2,407,534 - MPMX20_02296 0.26 -0.1
2,407,534 - MPMX20_02296 0.26 -1.0
2,407,544 - MPMX20_02296 0.28 +1.6
2,407,577 + MPMX20_02296 0.32 +0.5
2,407,585 - MPMX20_02296 0.34 -0.9
2,407,667 - MPMX20_02296 0.45 -1.2
2,407,706 + MPMX20_02296 0.51 -4.2
2,407,706 + MPMX20_02296 0.51 -1.3
2,407,706 + MPMX20_02296 0.51 +0.7
2,407,706 + MPMX20_02296 0.51 -2.1
2,407,706 + MPMX20_02296 0.51 -1.2
2,407,706 + MPMX20_02296 0.51 +0.3
2,407,706 + MPMX20_02296 0.51 +0.2
2,407,706 + MPMX20_02296 0.51 +1.3
2,407,714 - MPMX20_02296 0.52 -0.4
2,407,714 - MPMX20_02296 0.52 -0.4
2,407,714 - MPMX20_02296 0.52 +1.6
2,407,720 - MPMX20_02296 0.53 +0.6
2,407,772 - MPMX20_02296 0.60 -0.4
2,407,822 + MPMX20_02296 0.67 +1.3
2,407,832 + MPMX20_02296 0.69 +0.1
2,407,832 + MPMX20_02296 0.69 +0.7
2,407,832 + MPMX20_02296 0.69 +0.6
2,407,837 + MPMX20_02296 0.69 +1.1
2,407,837 + MPMX20_02296 0.69 +0.6
2,407,840 - MPMX20_02296 0.70 +1.8
2,407,840 - MPMX20_02296 0.70 -2.3
2,407,841 + MPMX20_02296 0.70 +0.1
2,407,841 + MPMX20_02296 0.70 +3.2
2,407,845 - MPMX20_02296 0.70 -2.4
2,407,915 + MPMX20_02296 0.80 -4.4
2,407,915 + MPMX20_02296 0.80 +0.3
2,407,915 + MPMX20_02296 0.80 +1.3
2,407,923 - MPMX20_02296 0.81 -0.1
2,407,930 - MPMX20_02296 0.82 +0.0
2,407,938 - MPMX20_02296 0.83 -1.0
2,407,940 - MPMX20_02296 0.84 -2.4
2,407,953 + MPMX20_02296 0.86 +1.1
2,407,970 + MPMX20_02296 0.88 -4.0
2,407,998 + -2.9
2,407,998 + +0.5
2,407,998 + +0.1
2,407,998 + +1.1
2,407,998 + +0.2
2,408,000 + -0.1
2,408,000 + -0.4
2,408,000 + +0.7
2,408,000 + +3.3
2,408,000 + -1.8
2,408,000 + -2.5
2,408,000 + -1.1
2,408,006 - +0.4
2,408,006 - -2.5
2,408,006 - -2.4
2,408,006 - -0.1
2,408,006 - -1.9
2,408,006 - +1.6
2,408,006 - +0.0
2,408,008 - -0.4
2,408,008 - +0.4
2,408,008 - +2.5
2,408,008 - +1.5
2,408,008 - +1.3
2,408,008 - +0.9
2,408,017 + -0.3
2,408,025 - +2.0
2,408,025 - +1.3
2,408,035 + +2.9
2,408,035 + +2.2
2,408,035 + -0.7
2,408,043 - -0.0
2,408,043 - -1.3
2,408,043 - -1.0
2,408,043 - -0.1
2,408,043 - -0.8
2,408,043 - -2.1
2,408,110 - MPMX20_02297 0.10 -1.0
2,408,116 + MPMX20_02297 0.11 -2.4
2,408,116 + MPMX20_02297 0.11 +1.3
2,408,116 + MPMX20_02297 0.11 +0.7
2,408,124 - MPMX20_02297 0.13 -0.3
2,408,124 - MPMX20_02297 0.13 -3.3
2,408,124 - MPMX20_02297 0.13 -3.5
2,408,124 - MPMX20_02297 0.13 +1.3
2,408,137 + MPMX20_02297 0.15 +1.0
2,408,154 + MPMX20_02297 0.18 -3.0
2,408,168 - MPMX20_02297 0.20 +0.9
2,408,209 + MPMX20_02297 0.27 +0.5
2,408,214 + MPMX20_02297 0.28 -2.9
2,408,258 + MPMX20_02297 0.36 -0.0
2,408,258 + MPMX20_02297 0.36 -1.9
2,408,258 + MPMX20_02297 0.36 -0.5
2,408,266 - MPMX20_02297 0.37 -1.0
2,408,266 - MPMX20_02297 0.37 -2.0

Or see this region's nucleotide sequence