Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02955 and MPMX20_02956 overlap by 29 nucleotides MPMX20_02956 and MPMX20_02957 overlap by 20 nucleotides
MPMX20_02955: MPMX20_02955 - putative inner membrane transporter YedA, at 3,081,340 to 3,082,254
_02955
MPMX20_02956: MPMX20_02956 - Very short patch repair protein, at 3,082,226 to 3,082,717
_02956
MPMX20_02957: MPMX20_02957 - DNA-cytosine methyltransferase, at 3,082,698 to 3,084,113
_02957
Position (kb)
3082
3083 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3081.266 kb on + strand at 3081.266 kb on + strand at 3081.274 kb on - strand at 3081.274 kb on - strand at 3081.343 kb on - strand at 3081.343 kb on - strand at 3081.395 kb on - strand at 3081.435 kb on + strand, within MPMX20_02955 at 3081.515 kb on + strand, within MPMX20_02955 at 3081.548 kb on + strand, within MPMX20_02955 at 3081.551 kb on - strand, within MPMX20_02955 at 3081.551 kb on - strand, within MPMX20_02955 at 3081.551 kb on - strand, within MPMX20_02955 at 3081.551 kb on - strand, within MPMX20_02955 at 3081.598 kb on - strand, within MPMX20_02955 at 3081.598 kb on - strand, within MPMX20_02955 at 3081.667 kb on + strand, within MPMX20_02955 at 3081.716 kb on + strand, within MPMX20_02955 at 3081.717 kb on + strand, within MPMX20_02955 at 3081.736 kb on - strand, within MPMX20_02955 at 3081.743 kb on + strand, within MPMX20_02955 at 3081.753 kb on + strand, within MPMX20_02955 at 3081.772 kb on - strand, within MPMX20_02955 at 3081.838 kb on + strand, within MPMX20_02955 at 3081.905 kb on + strand, within MPMX20_02955 at 3081.936 kb on - strand, within MPMX20_02955 at 3081.956 kb on + strand, within MPMX20_02955 at 3081.989 kb on + strand, within MPMX20_02955 at 3082.002 kb on - strand, within MPMX20_02955 at 3082.093 kb on - strand, within MPMX20_02955 at 3082.168 kb on - strand at 3082.183 kb on - strand at 3082.258 kb on + strand at 3082.345 kb on + strand, within MPMX20_02956 at 3082.345 kb on + strand, within MPMX20_02956 at 3082.353 kb on - strand, within MPMX20_02956 at 3082.370 kb on + strand, within MPMX20_02956 at 3082.378 kb on - strand, within MPMX20_02956 at 3082.378 kb on - strand, within MPMX20_02956 at 3082.389 kb on + strand, within MPMX20_02956 at 3082.389 kb on + strand, within MPMX20_02956 at 3082.389 kb on + strand, within MPMX20_02956 at 3082.397 kb on - strand, within MPMX20_02956 at 3082.397 kb on - strand, within MPMX20_02956 at 3082.397 kb on - strand, within MPMX20_02956 at 3082.397 kb on - strand, within MPMX20_02956 at 3082.417 kb on + strand, within MPMX20_02956 at 3082.417 kb on + strand, within MPMX20_02956 at 3082.417 kb on + strand, within MPMX20_02956 at 3082.417 kb on + strand, within MPMX20_02956 at 3082.430 kb on - strand, within MPMX20_02956 at 3082.442 kb on - strand, within MPMX20_02956 at 3082.523 kb on + strand, within MPMX20_02956 at 3082.546 kb on + strand, within MPMX20_02956 at 3082.592 kb on - strand, within MPMX20_02956 at 3082.625 kb on - strand, within MPMX20_02956 at 3082.686 kb on - strand at 3082.721 kb on - strand at 3082.737 kb on - strand at 3082.749 kb on - strand at 3082.827 kb on + strand at 3082.828 kb on + strand at 3082.828 kb on + strand at 3082.835 kb on - strand at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.858 kb on + strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.866 kb on - strand, within MPMX20_02957 at 3082.873 kb on + strand, within MPMX20_02957 at 3082.897 kb on + strand, within MPMX20_02957 at 3082.907 kb on + strand, within MPMX20_02957 at 3082.907 kb on + strand, within MPMX20_02957 at 3082.907 kb on + strand, within MPMX20_02957 at 3082.915 kb on - strand, within MPMX20_02957 at 3082.915 kb on - strand, within MPMX20_02957 at 3083.005 kb on - strand, within MPMX20_02957 at 3083.017 kb on - strand, within MPMX20_02957 at 3083.046 kb on + strand, within MPMX20_02957 at 3083.135 kb on + strand, within MPMX20_02957 at 3083.135 kb on + strand, within MPMX20_02957 at 3083.143 kb on - strand, within MPMX20_02957 at 3083.197 kb on - strand, within MPMX20_02957 at 3083.197 kb on - strand, within MPMX20_02957 at 3083.207 kb on + strand, within MPMX20_02957 at 3083.239 kb on - strand, within MPMX20_02957 at 3083.239 kb on - strand, within MPMX20_02957 at 3083.239 kb on - strand, within MPMX20_02957 at 3083.242 kb on - strand, within MPMX20_02957 at 3083.249 kb on + strand, within MPMX20_02957 at 3083.249 kb on + strand, within MPMX20_02957 at 3083.249 kb on + strand, within MPMX20_02957 at 3083.257 kb on - strand, within MPMX20_02957 at 3083.257 kb on - strand, within MPMX20_02957 at 3083.257 kb on - strand, within MPMX20_02957 at 3083.341 kb on + strand, within MPMX20_02957 at 3083.341 kb on + strand, within MPMX20_02957 at 3083.349 kb on - strand, within MPMX20_02957 at 3083.349 kb on - strand, within MPMX20_02957 at 3083.349 kb on - strand, within MPMX20_02957 at 3083.349 kb on - strand, within MPMX20_02957 at 3083.351 kb on - strand, within MPMX20_02957 at 3083.378 kb on + strand, within MPMX20_02957 at 3083.442 kb on - strand, within MPMX20_02957 at 3083.616 kb on + strand, within MPMX20_02957 at 3083.624 kb on - strand, within MPMX20_02957 at 3083.681 kb on + strand, within MPMX20_02957 at 3083.681 kb on + strand, within MPMX20_02957
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 3,081,266 + +0.5 3,081,266 + +0.9 3,081,274 - +0.1 3,081,274 - -0.5 3,081,343 - +0.3 3,081,343 - -0.5 3,081,395 - -0.2 3,081,435 + MPMX20_02955 0.10 +0.4 3,081,515 + MPMX20_02955 0.19 +0.9 3,081,548 + MPMX20_02955 0.23 -0.1 3,081,551 - MPMX20_02955 0.23 -0.0 3,081,551 - MPMX20_02955 0.23 +0.7 3,081,551 - MPMX20_02955 0.23 +0.4 3,081,551 - MPMX20_02955 0.23 -0.5 3,081,598 - MPMX20_02955 0.28 +0.1 3,081,598 - MPMX20_02955 0.28 -0.9 3,081,667 + MPMX20_02955 0.36 +0.7 3,081,716 + MPMX20_02955 0.41 +1.3 3,081,717 + MPMX20_02955 0.41 -0.9 3,081,736 - MPMX20_02955 0.43 +0.5 3,081,743 + MPMX20_02955 0.44 +1.2 3,081,753 + MPMX20_02955 0.45 +1.3 3,081,772 - MPMX20_02955 0.47 +0.9 3,081,838 + MPMX20_02955 0.54 +0.5 3,081,905 + MPMX20_02955 0.62 +0.3 3,081,936 - MPMX20_02955 0.65 +1.2 3,081,956 + MPMX20_02955 0.67 -0.7 3,081,989 + MPMX20_02955 0.71 +0.9 3,082,002 - MPMX20_02955 0.72 +0.3 3,082,093 - MPMX20_02955 0.82 +0.3 3,082,168 - -1.7 3,082,183 - -1.4 3,082,258 + -1.2 3,082,345 + MPMX20_02956 0.24 -0.7 3,082,345 + MPMX20_02956 0.24 +0.0 3,082,353 - MPMX20_02956 0.26 -1.1 3,082,370 + MPMX20_02956 0.29 -0.2 3,082,378 - MPMX20_02956 0.31 -0.3 3,082,378 - MPMX20_02956 0.31 +0.4 3,082,389 + MPMX20_02956 0.33 -0.7 3,082,389 + MPMX20_02956 0.33 -0.0 3,082,389 + MPMX20_02956 0.33 +0.6 3,082,397 - MPMX20_02956 0.35 -0.1 3,082,397 - MPMX20_02956 0.35 -0.9 3,082,397 - MPMX20_02956 0.35 +0.8 3,082,397 - MPMX20_02956 0.35 +0.0 3,082,417 + MPMX20_02956 0.39 +0.1 3,082,417 + MPMX20_02956 0.39 -0.2 3,082,417 + MPMX20_02956 0.39 -0.3 3,082,417 + MPMX20_02956 0.39 -0.7 3,082,430 - MPMX20_02956 0.41 +0.6 3,082,442 - MPMX20_02956 0.44 -1.1 3,082,523 + MPMX20_02956 0.60 +0.2 3,082,546 + MPMX20_02956 0.65 +1.3 3,082,592 - MPMX20_02956 0.74 -0.9 3,082,625 - MPMX20_02956 0.81 +1.5 3,082,686 - -2.6 3,082,721 - +0.0 3,082,737 - -0.7 3,082,749 - +0.3 3,082,827 + +0.5 3,082,828 + -0.6 3,082,828 + -0.7 3,082,835 - -0.3 3,082,858 + MPMX20_02957 0.11 +0.5 3,082,858 + MPMX20_02957 0.11 -1.5 3,082,858 + MPMX20_02957 0.11 +1.0 3,082,858 + MPMX20_02957 0.11 +0.5 3,082,858 + MPMX20_02957 0.11 -1.0 3,082,858 + MPMX20_02957 0.11 -0.5 3,082,858 + MPMX20_02957 0.11 +0.4 3,082,858 + MPMX20_02957 0.11 -0.9 3,082,866 - MPMX20_02957 0.12 +0.0 3,082,866 - MPMX20_02957 0.12 -0.5 3,082,866 - MPMX20_02957 0.12 +0.1 3,082,866 - MPMX20_02957 0.12 -0.6 3,082,866 - MPMX20_02957 0.12 +0.2 3,082,866 - MPMX20_02957 0.12 -0.5 3,082,866 - MPMX20_02957 0.12 +1.0 3,082,866 - MPMX20_02957 0.12 -0.9 3,082,873 + MPMX20_02957 0.12 -0.7 3,082,897 + MPMX20_02957 0.14 +0.0 3,082,907 + MPMX20_02957 0.15 -1.5 3,082,907 + MPMX20_02957 0.15 +0.2 3,082,907 + MPMX20_02957 0.15 +0.1 3,082,915 - MPMX20_02957 0.15 +0.4 3,082,915 - MPMX20_02957 0.15 +0.1 3,083,005 - MPMX20_02957 0.22 -0.5 3,083,017 - MPMX20_02957 0.23 -0.3 3,083,046 + MPMX20_02957 0.25 -0.3 3,083,135 + MPMX20_02957 0.31 +0.1 3,083,135 + MPMX20_02957 0.31 -0.3 3,083,143 - MPMX20_02957 0.31 +0.3 3,083,197 - MPMX20_02957 0.35 +1.4 3,083,197 - MPMX20_02957 0.35 -1.5 3,083,207 + MPMX20_02957 0.36 -1.6 3,083,239 - MPMX20_02957 0.38 -0.2 3,083,239 - MPMX20_02957 0.38 +0.8 3,083,239 - MPMX20_02957 0.38 -2.3 3,083,242 - MPMX20_02957 0.38 -0.8 3,083,249 + MPMX20_02957 0.39 -0.6 3,083,249 + MPMX20_02957 0.39 -0.4 3,083,249 + MPMX20_02957 0.39 -3.1 3,083,257 - MPMX20_02957 0.39 -2.7 3,083,257 - MPMX20_02957 0.39 -0.3 3,083,257 - MPMX20_02957 0.39 -0.4 3,083,341 + MPMX20_02957 0.45 +0.5 3,083,341 + MPMX20_02957 0.45 -0.0 3,083,349 - MPMX20_02957 0.46 -1.5 3,083,349 - MPMX20_02957 0.46 -0.5 3,083,349 - MPMX20_02957 0.46 -0.8 3,083,349 - MPMX20_02957 0.46 -0.9 3,083,351 - MPMX20_02957 0.46 -0.0 3,083,378 + MPMX20_02957 0.48 -0.7 3,083,442 - MPMX20_02957 0.53 -0.1 3,083,616 + MPMX20_02957 0.65 -0.6 3,083,624 - MPMX20_02957 0.65 -0.2 3,083,681 + MPMX20_02957 0.69 -0.2 3,083,681 + MPMX20_02957 0.69 -0.5
Or see this region's nucleotide sequence