Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01133

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01132 and MPMX20_01133 are separated by 121 nucleotidesMPMX20_01133 and MPMX20_01134 are separated by 121 nucleotidesMPMX20_01134 and MPMX20_01135 overlap by 11 nucleotides MPMX20_01132: MPMX20_01132 - hypothetical protein, at 1,193,056 to 1,194,090 _01132 MPMX20_01133: MPMX20_01133 - Oxygen-insensitive NAD(P)H nitroreductase, at 1,194,212 to 1,194,865 _01133 MPMX20_01134: MPMX20_01134 - hypothetical protein, at 1,194,987 to 1,195,355 _01134 MPMX20_01135: MPMX20_01135 - HTH-type transcriptional regulator BetI, at 1,195,345 to 1,195,935 _01135 Position (kb) 1194 1195Strain fitness (log2 ratio) -2 -1 0 1 2at 1193.215 kb on + strand, within MPMX20_01132at 1193.223 kb on - strand, within MPMX20_01132at 1193.311 kb on - strand, within MPMX20_01132at 1193.399 kb on - strand, within MPMX20_01132at 1193.422 kb on + strand, within MPMX20_01132at 1193.430 kb on - strand, within MPMX20_01132at 1193.496 kb on + strand, within MPMX20_01132at 1193.507 kb on + strand, within MPMX20_01132at 1193.548 kb on + strand, within MPMX20_01132at 1193.596 kb on - strand, within MPMX20_01132at 1193.624 kb on - strand, within MPMX20_01132at 1193.641 kb on - strand, within MPMX20_01132at 1193.686 kb on + strand, within MPMX20_01132at 1193.689 kb on - strand, within MPMX20_01132at 1193.693 kb on + strand, within MPMX20_01132at 1193.699 kb on - strand, within MPMX20_01132at 1193.727 kb on + strand, within MPMX20_01132at 1193.761 kb on - strand, within MPMX20_01132at 1193.774 kb on + strand, within MPMX20_01132at 1193.823 kb on - strand, within MPMX20_01132at 1193.825 kb on + strand, within MPMX20_01132at 1193.830 kb on + strand, within MPMX20_01132at 1193.833 kb on - strand, within MPMX20_01132at 1193.833 kb on - strand, within MPMX20_01132at 1193.838 kb on - strand, within MPMX20_01132at 1193.838 kb on - strand, within MPMX20_01132at 1193.932 kb on + strand, within MPMX20_01132at 1193.935 kb on - strand, within MPMX20_01132at 1193.935 kb on - strand, within MPMX20_01132at 1193.948 kb on + strand, within MPMX20_01132at 1193.963 kb on - strand, within MPMX20_01132at 1193.963 kb on - strand, within MPMX20_01132at 1193.979 kb on + strand, within MPMX20_01132at 1193.979 kb on + strand, within MPMX20_01132at 1193.979 kb on + strand, within MPMX20_01132at 1193.984 kb on + strand, within MPMX20_01132at 1194.060 kb on + strandat 1194.073 kb on - strandat 1194.153 kb on + strandat 1194.175 kb on - strandat 1194.178 kb on + strandat 1194.188 kb on + strandat 1194.314 kb on + strand, within MPMX20_01133at 1194.314 kb on + strand, within MPMX20_01133at 1194.322 kb on - strand, within MPMX20_01133at 1194.419 kb on - strand, within MPMX20_01133at 1194.536 kb on - strand, within MPMX20_01133at 1194.545 kb on - strand, within MPMX20_01133at 1194.584 kb on - strand, within MPMX20_01133at 1194.587 kb on + strand, within MPMX20_01133at 1194.614 kb on + strand, within MPMX20_01133at 1194.625 kb on + strand, within MPMX20_01133at 1194.625 kb on + strand, within MPMX20_01133at 1194.633 kb on - strand, within MPMX20_01133at 1194.633 kb on - strand, within MPMX20_01133at 1194.700 kb on - strand, within MPMX20_01133at 1194.700 kb on - strand, within MPMX20_01133at 1194.733 kb on + strand, within MPMX20_01133at 1194.740 kb on - strand, within MPMX20_01133at 1194.740 kb on - strand, within MPMX20_01133at 1194.771 kb on - strand, within MPMX20_01133at 1194.810 kb on - strandat 1194.814 kb on + strandat 1194.831 kb on - strandat 1194.978 kb on + strandat 1195.025 kb on + strand, within MPMX20_01134at 1195.139 kb on + strand, within MPMX20_01134at 1195.147 kb on - strand, within MPMX20_01134at 1195.200 kb on + strand, within MPMX20_01134at 1195.260 kb on - strand, within MPMX20_01134at 1195.282 kb on + strand, within MPMX20_01134at 1195.282 kb on + strand, within MPMX20_01134at 1195.290 kb on - strand, within MPMX20_01134at 1195.321 kb on + strandat 1195.396 kb on + strandat 1195.594 kb on - strand, within MPMX20_01135at 1195.666 kb on + strand, within MPMX20_01135at 1195.698 kb on + strand, within MPMX20_01135at 1195.698 kb on + strand, within MPMX20_01135at 1195.706 kb on - strand, within MPMX20_01135at 1195.706 kb on - strand, within MPMX20_01135at 1195.706 kb on - strand, within MPMX20_01135at 1195.818 kb on - strand, within MPMX20_01135at 1195.847 kb on + strand, within MPMX20_01135at 1195.859 kb on + strand, within MPMX20_01135at 1195.863 kb on - strand, within MPMX20_01135at 1195.863 kb on - strand, within MPMX20_01135

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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1,193,215 + MPMX20_01132 0.15 +0.3
1,193,223 - MPMX20_01132 0.16 -2.1
1,193,311 - MPMX20_01132 0.25 +2.0
1,193,399 - MPMX20_01132 0.33 +0.3
1,193,422 + MPMX20_01132 0.35 +0.3
1,193,430 - MPMX20_01132 0.36 +0.1
1,193,496 + MPMX20_01132 0.43 +0.3
1,193,507 + MPMX20_01132 0.44 -1.7
1,193,548 + MPMX20_01132 0.48 +0.8
1,193,596 - MPMX20_01132 0.52 +0.8
1,193,624 - MPMX20_01132 0.55 +0.5
1,193,641 - MPMX20_01132 0.57 -0.1
1,193,686 + MPMX20_01132 0.61 -0.4
1,193,689 - MPMX20_01132 0.61 +0.9
1,193,693 + MPMX20_01132 0.62 -0.3
1,193,699 - MPMX20_01132 0.62 +0.4
1,193,727 + MPMX20_01132 0.65 +0.5
1,193,761 - MPMX20_01132 0.68 +0.7
1,193,774 + MPMX20_01132 0.69 -0.5
1,193,823 - MPMX20_01132 0.74 +1.1
1,193,825 + MPMX20_01132 0.74 -0.6
1,193,830 + MPMX20_01132 0.75 +1.4
1,193,833 - MPMX20_01132 0.75 +0.0
1,193,833 - MPMX20_01132 0.75 +0.0
1,193,838 - MPMX20_01132 0.76 +0.5
1,193,838 - MPMX20_01132 0.76 -0.6
1,193,932 + MPMX20_01132 0.85 -0.6
1,193,935 - MPMX20_01132 0.85 -2.3
1,193,935 - MPMX20_01132 0.85 +0.8
1,193,948 + MPMX20_01132 0.86 -1.1
1,193,963 - MPMX20_01132 0.88 -0.8
1,193,963 - MPMX20_01132 0.88 -0.1
1,193,979 + MPMX20_01132 0.89 -2.0
1,193,979 + MPMX20_01132 0.89 +0.6
1,193,979 + MPMX20_01132 0.89 -0.3
1,193,984 + MPMX20_01132 0.90 +1.0
1,194,060 + -0.4
1,194,073 - +0.0
1,194,153 + +0.1
1,194,175 - +0.3
1,194,178 + +0.4
1,194,188 + -0.2
1,194,314 + MPMX20_01133 0.16 -1.6
1,194,314 + MPMX20_01133 0.16 +0.0
1,194,322 - MPMX20_01133 0.17 +0.2
1,194,419 - MPMX20_01133 0.32 -0.0
1,194,536 - MPMX20_01133 0.50 -0.3
1,194,545 - MPMX20_01133 0.51 -0.5
1,194,584 - MPMX20_01133 0.57 +1.7
1,194,587 + MPMX20_01133 0.57 +0.3
1,194,614 + MPMX20_01133 0.61 -2.1
1,194,625 + MPMX20_01133 0.63 -1.2
1,194,625 + MPMX20_01133 0.63 +0.5
1,194,633 - MPMX20_01133 0.64 +0.0
1,194,633 - MPMX20_01133 0.64 +0.5
1,194,700 - MPMX20_01133 0.75 -0.3
1,194,700 - MPMX20_01133 0.75 -0.1
1,194,733 + MPMX20_01133 0.80 +0.2
1,194,740 - MPMX20_01133 0.81 +0.2
1,194,740 - MPMX20_01133 0.81 +0.2
1,194,771 - MPMX20_01133 0.85 +0.2
1,194,810 - +0.0
1,194,814 + -0.2
1,194,831 - +0.9
1,194,978 + -0.7
1,195,025 + MPMX20_01134 0.10 -0.2
1,195,139 + MPMX20_01134 0.41 -1.8
1,195,147 - MPMX20_01134 0.43 -0.1
1,195,200 + MPMX20_01134 0.58 +0.1
1,195,260 - MPMX20_01134 0.74 +0.5
1,195,282 + MPMX20_01134 0.80 +1.9
1,195,282 + MPMX20_01134 0.80 +1.1
1,195,290 - MPMX20_01134 0.82 +1.5
1,195,321 + +0.6
1,195,396 + +0.0
1,195,594 - MPMX20_01135 0.42 -1.0
1,195,666 + MPMX20_01135 0.54 -1.0
1,195,698 + MPMX20_01135 0.60 -0.4
1,195,698 + MPMX20_01135 0.60 -0.7
1,195,706 - MPMX20_01135 0.61 +0.1
1,195,706 - MPMX20_01135 0.61 -1.5
1,195,706 - MPMX20_01135 0.61 -0.5
1,195,818 - MPMX20_01135 0.80 -1.5
1,195,847 + MPMX20_01135 0.85 -0.3
1,195,859 + MPMX20_01135 0.87 -0.4
1,195,863 - MPMX20_01135 0.88 -0.8
1,195,863 - MPMX20_01135 0.88 -0.2

Or see this region's nucleotide sequence