Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00450

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00448 and MPMX20_00449 overlap by 8 nucleotidesMPMX20_00449 and MPMX20_00450 overlap by 50 nucleotidesMPMX20_00450 and MPMX20_00451 are separated by 9 nucleotides MPMX20_00448: MPMX20_00448 - Bifunctional NAD(P)H-hydrate repair enzyme Nnr, at 461,922 to 463,430 _00448 MPMX20_00449: MPMX20_00449 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 463,423 to 463,884 _00449 MPMX20_00450: MPMX20_00450 - N-acetylmuramoyl-L-alanine amidase AmiB, at 463,835 to 465,247 _00450 MPMX20_00451: MPMX20_00451 - DNA mismatch repair protein MutL, at 465,257 to 467,101 _00451 Position (kb) 463 464 465 466Strain fitness (log2 ratio) -3 -2 -1 0 1at 462.865 kb on + strand, within MPMX20_00448at 462.892 kb on + strand, within MPMX20_00448at 462.905 kb on + strand, within MPMX20_00448at 462.972 kb on + strand, within MPMX20_00448at 462.973 kb on + strand, within MPMX20_00448at 462.980 kb on - strand, within MPMX20_00448at 463.153 kb on - strand, within MPMX20_00448at 463.163 kb on - strand, within MPMX20_00448at 463.181 kb on - strand, within MPMX20_00448at 463.232 kb on - strand, within MPMX20_00448at 463.885 kb on + strandat 463.893 kb on - strandat 463.893 kb on - strandat 463.893 kb on - strandat 463.893 kb on - strandat 463.920 kb on - strandat 463.965 kb on - strandat 463.965 kb on - strandat 464.003 kb on + strand, within MPMX20_00450at 464.025 kb on + strand, within MPMX20_00450at 464.037 kb on + strand, within MPMX20_00450at 464.105 kb on + strand, within MPMX20_00450at 464.105 kb on + strand, within MPMX20_00450at 464.113 kb on - strand, within MPMX20_00450at 464.113 kb on - strand, within MPMX20_00450at 464.216 kb on + strand, within MPMX20_00450at 464.216 kb on + strand, within MPMX20_00450at 464.223 kb on - strand, within MPMX20_00450at 464.224 kb on - strand, within MPMX20_00450at 464.253 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.347 kb on + strand, within MPMX20_00450at 464.348 kb on + strand, within MPMX20_00450at 464.364 kb on + strand, within MPMX20_00450at 464.433 kb on - strand, within MPMX20_00450at 464.594 kb on + strand, within MPMX20_00450at 464.596 kb on + strand, within MPMX20_00450at 464.604 kb on - strand, within MPMX20_00450at 464.622 kb on - strand, within MPMX20_00450at 464.675 kb on - strand, within MPMX20_00450at 464.680 kb on - strand, within MPMX20_00450at 464.734 kb on + strand, within MPMX20_00450at 464.748 kb on - strand, within MPMX20_00450at 464.750 kb on + strand, within MPMX20_00450at 464.764 kb on - strand, within MPMX20_00450at 464.802 kb on + strand, within MPMX20_00450at 464.802 kb on + strand, within MPMX20_00450at 464.810 kb on - strand, within MPMX20_00450at 464.831 kb on + strand, within MPMX20_00450at 464.831 kb on + strand, within MPMX20_00450at 464.839 kb on - strand, within MPMX20_00450at 464.839 kb on - strand, within MPMX20_00450at 464.962 kb on + strand, within MPMX20_00450at 464.999 kb on + strand, within MPMX20_00450at 465.016 kb on - strand, within MPMX20_00450at 465.133 kb on + strandat 465.141 kb on - strandat 465.187 kb on + strandat 465.190 kb on - strandat 465.195 kb on - strandat 465.210 kb on + strandat 465.224 kb on + strandat 465.303 kb on + strandat 465.334 kb on + strandat 465.335 kb on - strandat 465.357 kb on + strandat 465.405 kb on + strandat 465.413 kb on - strandat 465.413 kb on - strandat 465.476 kb on + strand, within MPMX20_00451at 465.511 kb on + strand, within MPMX20_00451at 465.597 kb on + strand, within MPMX20_00451at 465.597 kb on - strand, within MPMX20_00451at 465.605 kb on - strand, within MPMX20_00451at 465.622 kb on + strand, within MPMX20_00451at 465.622 kb on + strand, within MPMX20_00451at 465.622 kb on + strand, within MPMX20_00451at 465.623 kb on - strand, within MPMX20_00451at 465.630 kb on - strand, within MPMX20_00451at 465.644 kb on - strand, within MPMX20_00451at 465.650 kb on - strand, within MPMX20_00451at 465.689 kb on - strand, within MPMX20_00451at 465.689 kb on - strand, within MPMX20_00451at 465.791 kb on + strand, within MPMX20_00451at 465.799 kb on - strand, within MPMX20_00451at 465.799 kb on - strand, within MPMX20_00451at 465.801 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.813 kb on + strand, within MPMX20_00451at 465.821 kb on - strand, within MPMX20_00451at 465.839 kb on + strand, within MPMX20_00451at 465.840 kb on - strand, within MPMX20_00451at 465.862 kb on + strand, within MPMX20_00451at 465.929 kb on - strand, within MPMX20_00451at 465.985 kb on - strand, within MPMX20_00451at 466.035 kb on + strand, within MPMX20_00451at 466.081 kb on - strand, within MPMX20_00451at 466.081 kb on - strand, within MPMX20_00451at 466.111 kb on - strand, within MPMX20_00451at 466.233 kb on + strand, within MPMX20_00451

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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462,865 + MPMX20_00448 0.62 +0.2
462,892 + MPMX20_00448 0.64 -0.1
462,905 + MPMX20_00448 0.65 -0.8
462,972 + MPMX20_00448 0.70 -0.4
462,973 + MPMX20_00448 0.70 +0.8
462,980 - MPMX20_00448 0.70 +0.6
463,153 - MPMX20_00448 0.82 +0.6
463,163 - MPMX20_00448 0.82 +1.3
463,181 - MPMX20_00448 0.83 +0.3
463,232 - MPMX20_00448 0.87 -1.3
463,885 + -0.3
463,893 - +0.9
463,893 - +0.3
463,893 - -0.3
463,893 - +0.1
463,920 - +0.3
463,965 - -0.8
463,965 - -0.1
464,003 + MPMX20_00450 0.12 +0.9
464,025 + MPMX20_00450 0.13 +0.1
464,037 + MPMX20_00450 0.14 -0.6
464,105 + MPMX20_00450 0.19 -1.1
464,105 + MPMX20_00450 0.19 -0.9
464,113 - MPMX20_00450 0.20 -0.1
464,113 - MPMX20_00450 0.20 +0.2
464,216 + MPMX20_00450 0.27 +0.4
464,216 + MPMX20_00450 0.27 -0.1
464,223 - MPMX20_00450 0.27 +0.5
464,224 - MPMX20_00450 0.28 +0.3
464,253 + MPMX20_00450 0.30 +1.3
464,347 + MPMX20_00450 0.36 +0.2
464,347 + MPMX20_00450 0.36 +0.7
464,347 + MPMX20_00450 0.36 -1.4
464,348 + MPMX20_00450 0.36 -0.4
464,364 + MPMX20_00450 0.37 -0.2
464,433 - MPMX20_00450 0.42 -1.7
464,594 + MPMX20_00450 0.54 +0.1
464,596 + MPMX20_00450 0.54 -0.6
464,604 - MPMX20_00450 0.54 -0.6
464,622 - MPMX20_00450 0.56 -0.1
464,675 - MPMX20_00450 0.59 +0.2
464,680 - MPMX20_00450 0.60 -1.7
464,734 + MPMX20_00450 0.64 -0.6
464,748 - MPMX20_00450 0.65 +0.4
464,750 + MPMX20_00450 0.65 -1.1
464,764 - MPMX20_00450 0.66 +0.7
464,802 + MPMX20_00450 0.68 +1.4
464,802 + MPMX20_00450 0.68 +0.7
464,810 - MPMX20_00450 0.69 +0.6
464,831 + MPMX20_00450 0.70 +0.9
464,831 + MPMX20_00450 0.70 -3.3
464,839 - MPMX20_00450 0.71 +0.4
464,839 - MPMX20_00450 0.71 +0.7
464,962 + MPMX20_00450 0.80 +0.3
464,999 + MPMX20_00450 0.82 -0.6
465,016 - MPMX20_00450 0.84 +0.2
465,133 + +1.4
465,141 - -1.1
465,187 + -1.1
465,190 - +0.9
465,195 - +0.8
465,210 + -0.4
465,224 + -0.8
465,303 + -0.7
465,334 + -0.8
465,335 - +0.0
465,357 + +0.4
465,405 + -1.5
465,413 - -0.1
465,413 - -0.0
465,476 + MPMX20_00451 0.12 -0.5
465,511 + MPMX20_00451 0.14 +0.4
465,597 + MPMX20_00451 0.18 -2.5
465,597 - MPMX20_00451 0.18 -0.1
465,605 - MPMX20_00451 0.19 -0.5
465,622 + MPMX20_00451 0.20 -1.3
465,622 + MPMX20_00451 0.20 -0.1
465,622 + MPMX20_00451 0.20 -0.9
465,623 - MPMX20_00451 0.20 +1.5
465,630 - MPMX20_00451 0.20 +0.0
465,644 - MPMX20_00451 0.21 +0.9
465,650 - MPMX20_00451 0.21 +0.1
465,689 - MPMX20_00451 0.23 -0.4
465,689 - MPMX20_00451 0.23 +1.6
465,791 + MPMX20_00451 0.29 +0.1
465,799 - MPMX20_00451 0.29 -1.1
465,799 - MPMX20_00451 0.29 +0.5
465,801 + MPMX20_00451 0.29 -1.3
465,813 + MPMX20_00451 0.30 -1.9
465,813 + MPMX20_00451 0.30 -0.6
465,813 + MPMX20_00451 0.30 +0.1
465,813 + MPMX20_00451 0.30 +0.2
465,821 - MPMX20_00451 0.31 +1.0
465,839 + MPMX20_00451 0.32 +0.2
465,840 - MPMX20_00451 0.32 +0.6
465,862 + MPMX20_00451 0.33 -0.4
465,929 - MPMX20_00451 0.36 +1.6
465,985 - MPMX20_00451 0.39 +0.0
466,035 + MPMX20_00451 0.42 +0.8
466,081 - MPMX20_00451 0.45 -1.0
466,081 - MPMX20_00451 0.45 -1.3
466,111 - MPMX20_00451 0.46 +0.1
466,233 + MPMX20_00451 0.53 +0.4

Or see this region's nucleotide sequence