Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00263

Experiment: D-Fructose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00261 and MPMX20_00262 are separated by 48 nucleotidesMPMX20_00262 and MPMX20_00263 are separated by 115 nucleotidesMPMX20_00263 and MPMX20_00264 are separated by 170 nucleotides MPMX20_00261: MPMX20_00261 - hypothetical protein, at 279,769 to 279,978 _00261 MPMX20_00262: MPMX20_00262 - Zinc uptake regulation protein, at 280,027 to 280,539 _00262 MPMX20_00263: MPMX20_00263 - hypothetical protein, at 280,655 to 281,143 _00263 MPMX20_00264: MPMX20_00264 - hypothetical protein, at 281,314 to 282,624 _00264 Position (kb) 280 281 282Strain fitness (log2 ratio) -2 -1 0 1 2at 279.747 kb on + strandat 279.774 kb on - strandat 279.794 kb on + strand, within MPMX20_00261at 279.804 kb on + strand, within MPMX20_00261at 279.812 kb on - strand, within MPMX20_00261at 279.812 kb on - strand, within MPMX20_00261at 279.812 kb on - strand, within MPMX20_00261at 279.812 kb on - strand, within MPMX20_00261at 279.812 kb on - strand, within MPMX20_00261at 279.818 kb on + strand, within MPMX20_00261at 279.837 kb on + strand, within MPMX20_00261at 279.837 kb on + strand, within MPMX20_00261at 279.837 kb on + strand, within MPMX20_00261at 279.904 kb on + strand, within MPMX20_00261at 279.904 kb on + strand, within MPMX20_00261at 279.904 kb on + strand, within MPMX20_00261at 279.912 kb on - strand, within MPMX20_00261at 280.040 kb on + strandat 280.050 kb on + strandat 280.098 kb on - strand, within MPMX20_00262at 280.221 kb on - strand, within MPMX20_00262at 280.284 kb on + strand, within MPMX20_00262at 280.292 kb on - strand, within MPMX20_00262at 280.292 kb on - strand, within MPMX20_00262at 280.402 kb on - strand, within MPMX20_00262at 280.404 kb on + strand, within MPMX20_00262at 280.428 kb on + strand, within MPMX20_00262at 280.436 kb on - strand, within MPMX20_00262at 280.491 kb on - strandat 280.497 kb on + strandat 280.505 kb on - strandat 280.531 kb on - strandat 280.546 kb on + strandat 280.554 kb on + strandat 280.562 kb on - strandat 280.576 kb on + strandat 280.607 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.617 kb on + strandat 280.625 kb on - strandat 280.625 kb on - strandat 280.625 kb on - strandat 280.625 kb on - strandat 280.625 kb on - strandat 280.625 kb on - strandat 280.625 kb on - strandat 280.627 kb on - strandat 280.628 kb on + strandat 280.670 kb on - strandat 280.673 kb on + strandat 280.751 kb on + strand, within MPMX20_00263at 280.780 kb on + strand, within MPMX20_00263at 280.784 kb on + strand, within MPMX20_00263at 280.792 kb on - strand, within MPMX20_00263at 280.821 kb on + strand, within MPMX20_00263at 280.821 kb on + strand, within MPMX20_00263at 280.829 kb on - strand, within MPMX20_00263at 280.855 kb on + strand, within MPMX20_00263at 280.868 kb on + strand, within MPMX20_00263at 280.868 kb on + strand, within MPMX20_00263at 280.876 kb on - strand, within MPMX20_00263at 280.878 kb on + strand, within MPMX20_00263at 280.919 kb on - strand, within MPMX20_00263at 280.929 kb on + strand, within MPMX20_00263at 280.936 kb on - strand, within MPMX20_00263at 280.959 kb on + strand, within MPMX20_00263at 280.959 kb on + strand, within MPMX20_00263at 280.959 kb on + strand, within MPMX20_00263at 280.959 kb on + strand, within MPMX20_00263at 280.959 kb on + strand, within MPMX20_00263at 280.959 kb on + strand, within MPMX20_00263at 280.966 kb on - strand, within MPMX20_00263at 280.967 kb on - strand, within MPMX20_00263at 280.967 kb on - strand, within MPMX20_00263at 280.988 kb on + strand, within MPMX20_00263at 281.004 kb on - strand, within MPMX20_00263at 281.010 kb on - strand, within MPMX20_00263at 281.055 kb on - strand, within MPMX20_00263at 281.085 kb on + strand, within MPMX20_00263at 281.089 kb on + strand, within MPMX20_00263at 281.097 kb on - strandat 281.107 kb on - strandat 281.121 kb on + strandat 281.187 kb on + strandat 281.266 kb on + strandat 281.266 kb on - strandat 281.273 kb on + strandat 281.277 kb on + strandat 281.294 kb on + strandat 281.295 kb on + strandat 281.302 kb on + strandat 281.302 kb on + strandat 281.302 kb on + strandat 281.304 kb on - strandat 281.314 kb on - strandat 281.314 kb on - strandat 281.314 kb on - strandat 281.353 kb on + strandat 281.353 kb on - strandat 281.386 kb on + strandat 281.386 kb on + strandat 281.386 kb on + strandat 281.386 kb on + strandat 281.386 kb on + strandat 281.386 kb on + strandat 281.386 kb on + strandat 281.391 kb on + strandat 281.391 kb on + strandat 281.394 kb on - strandat 281.394 kb on - strandat 281.394 kb on - strandat 281.394 kb on - strandat 281.394 kb on - strandat 281.396 kb on + strandat 281.399 kb on - strandat 281.404 kb on - strandat 281.404 kb on - strandat 281.416 kb on + strandat 281.454 kb on - strand, within MPMX20_00264at 281.461 kb on + strand, within MPMX20_00264at 281.466 kb on + strand, within MPMX20_00264at 281.474 kb on - strand, within MPMX20_00264at 281.479 kb on - strand, within MPMX20_00264at 281.499 kb on + strand, within MPMX20_00264at 281.504 kb on + strand, within MPMX20_00264at 281.553 kb on + strand, within MPMX20_00264at 281.579 kb on - strand, within MPMX20_00264at 281.579 kb on - strand, within MPMX20_00264at 281.621 kb on + strand, within MPMX20_00264at 281.622 kb on + strand, within MPMX20_00264at 281.629 kb on - strand, within MPMX20_00264at 281.629 kb on - strand, within MPMX20_00264at 281.629 kb on - strand, within MPMX20_00264at 281.629 kb on - strand, within MPMX20_00264at 281.629 kb on - strand, within MPMX20_00264at 281.670 kb on + strand, within MPMX20_00264at 281.670 kb on + strand, within MPMX20_00264at 281.670 kb on + strand, within MPMX20_00264at 281.678 kb on - strand, within MPMX20_00264at 281.678 kb on - strand, within MPMX20_00264at 281.678 kb on - strand, within MPMX20_00264at 281.678 kb on - strand, within MPMX20_00264at 281.709 kb on - strand, within MPMX20_00264at 281.714 kb on - strand, within MPMX20_00264at 281.797 kb on + strand, within MPMX20_00264at 281.797 kb on + strand, within MPMX20_00264at 281.864 kb on + strand, within MPMX20_00264at 281.864 kb on + strand, within MPMX20_00264at 281.874 kb on - strand, within MPMX20_00264at 281.894 kb on + strand, within MPMX20_00264at 281.899 kb on + strand, within MPMX20_00264at 281.899 kb on + strand, within MPMX20_00264at 281.902 kb on - strand, within MPMX20_00264at 281.907 kb on - strand, within MPMX20_00264at 281.907 kb on - strand, within MPMX20_00264at 281.909 kb on - strand, within MPMX20_00264at 281.911 kb on + strand, within MPMX20_00264at 281.911 kb on + strand, within MPMX20_00264at 281.911 kb on + strand, within MPMX20_00264at 281.914 kb on - strand, within MPMX20_00264at 281.919 kb on - strand, within MPMX20_00264at 282.002 kb on - strand, within MPMX20_00264at 282.025 kb on + strand, within MPMX20_00264at 282.043 kb on - strand, within MPMX20_00264at 282.047 kb on + strand, within MPMX20_00264at 282.055 kb on - strand, within MPMX20_00264at 282.122 kb on - strand, within MPMX20_00264

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Fructose (C)
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279,747 + -0.7
279,774 - +0.9
279,794 + MPMX20_00261 0.12 +0.5
279,804 + MPMX20_00261 0.17 -1.6
279,812 - MPMX20_00261 0.20 +0.1
279,812 - MPMX20_00261 0.20 +0.9
279,812 - MPMX20_00261 0.20 +0.6
279,812 - MPMX20_00261 0.20 +0.0
279,812 - MPMX20_00261 0.20 +0.6
279,818 + MPMX20_00261 0.23 +0.3
279,837 + MPMX20_00261 0.32 -0.6
279,837 + MPMX20_00261 0.32 +0.9
279,837 + MPMX20_00261 0.32 +1.7
279,904 + MPMX20_00261 0.64 -0.8
279,904 + MPMX20_00261 0.64 +0.3
279,904 + MPMX20_00261 0.64 -0.7
279,912 - MPMX20_00261 0.68 -0.1
280,040 + -0.4
280,050 + -0.8
280,098 - MPMX20_00262 0.14 +0.0
280,221 - MPMX20_00262 0.38 +0.2
280,284 + MPMX20_00262 0.50 -0.1
280,292 - MPMX20_00262 0.52 +0.3
280,292 - MPMX20_00262 0.52 -0.9
280,402 - MPMX20_00262 0.73 +0.1
280,404 + MPMX20_00262 0.73 -2.0
280,428 + MPMX20_00262 0.78 -0.8
280,436 - MPMX20_00262 0.80 -1.2
280,491 - -0.6
280,497 + +0.2
280,505 - +0.6
280,531 - -0.1
280,546 + +0.5
280,554 + -0.9
280,562 - -0.7
280,576 + +0.2
280,607 + -1.5
280,617 + +0.0
280,617 + -0.9
280,617 + +1.0
280,617 + -0.4
280,617 + -0.4
280,617 + -1.1
280,617 + +0.2
280,617 + -0.0
280,617 + +0.6
280,617 + +1.3
280,617 + -0.2
280,625 - +0.3
280,625 - -0.6
280,625 - -0.4
280,625 - +1.0
280,625 - +2.1
280,625 - -0.4
280,625 - +0.9
280,627 - -1.7
280,628 + -1.0
280,670 - +1.2
280,673 + +1.3
280,751 + MPMX20_00263 0.20 -0.4
280,780 + MPMX20_00263 0.26 -0.2
280,784 + MPMX20_00263 0.26 -0.1
280,792 - MPMX20_00263 0.28 -0.7
280,821 + MPMX20_00263 0.34 -2.2
280,821 + MPMX20_00263 0.34 -0.0
280,829 - MPMX20_00263 0.36 +1.0
280,855 + MPMX20_00263 0.41 +1.7
280,868 + MPMX20_00263 0.44 -0.6
280,868 + MPMX20_00263 0.44 +0.8
280,876 - MPMX20_00263 0.45 -0.4
280,878 + MPMX20_00263 0.46 -1.4
280,919 - MPMX20_00263 0.54 +1.3
280,929 + MPMX20_00263 0.56 +1.0
280,936 - MPMX20_00263 0.57 +0.1
280,959 + MPMX20_00263 0.62 -0.4
280,959 + MPMX20_00263 0.62 -0.7
280,959 + MPMX20_00263 0.62 -0.6
280,959 + MPMX20_00263 0.62 +0.1
280,959 + MPMX20_00263 0.62 +1.0
280,959 + MPMX20_00263 0.62 +0.1
280,966 - MPMX20_00263 0.64 +0.0
280,967 - MPMX20_00263 0.64 +2.2
280,967 - MPMX20_00263 0.64 -0.1
280,988 + MPMX20_00263 0.68 -0.3
281,004 - MPMX20_00263 0.71 -1.2
281,010 - MPMX20_00263 0.73 -0.1
281,055 - MPMX20_00263 0.82 +1.5
281,085 + MPMX20_00263 0.88 -0.3
281,089 + MPMX20_00263 0.89 +0.8
281,097 - -0.3
281,107 - -0.0
281,121 + +0.6
281,187 + -0.7
281,266 + +0.5
281,266 - +0.3
281,273 + +0.7
281,277 + +0.8
281,294 + +0.1
281,295 + -2.3
281,302 + -0.9
281,302 + -0.3
281,302 + -1.1
281,304 - +0.4
281,314 - -0.5
281,314 - -0.3
281,314 - +0.0
281,353 + -1.5
281,353 - +0.9
281,386 + +0.8
281,386 + -0.2
281,386 + -0.8
281,386 + -0.2
281,386 + +0.7
281,386 + -0.6
281,386 + -0.1
281,391 + +0.1
281,391 + +0.4
281,394 - -0.1
281,394 - -0.7
281,394 - +1.5
281,394 - -1.0
281,394 - -0.5
281,396 + +0.5
281,399 - +0.3
281,404 - +0.9
281,404 - +0.0
281,416 + -0.1
281,454 - MPMX20_00264 0.11 +0.9
281,461 + MPMX20_00264 0.11 +0.3
281,466 + MPMX20_00264 0.12 +0.1
281,474 - MPMX20_00264 0.12 -0.7
281,479 - MPMX20_00264 0.13 +1.3
281,499 + MPMX20_00264 0.14 +1.0
281,504 + MPMX20_00264 0.14 +0.0
281,553 + MPMX20_00264 0.18 +0.5
281,579 - MPMX20_00264 0.20 +1.1
281,579 - MPMX20_00264 0.20 +0.8
281,621 + MPMX20_00264 0.23 +0.0
281,622 + MPMX20_00264 0.23 -0.2
281,629 - MPMX20_00264 0.24 +0.3
281,629 - MPMX20_00264 0.24 -0.4
281,629 - MPMX20_00264 0.24 +0.7
281,629 - MPMX20_00264 0.24 +1.9
281,629 - MPMX20_00264 0.24 +1.3
281,670 + MPMX20_00264 0.27 +1.2
281,670 + MPMX20_00264 0.27 +1.1
281,670 + MPMX20_00264 0.27 +0.5
281,678 - MPMX20_00264 0.28 +1.9
281,678 - MPMX20_00264 0.28 -1.0
281,678 - MPMX20_00264 0.28 +0.1
281,678 - MPMX20_00264 0.28 -0.8
281,709 - MPMX20_00264 0.30 +1.0
281,714 - MPMX20_00264 0.31 +1.0
281,797 + MPMX20_00264 0.37 -0.5
281,797 + MPMX20_00264 0.37 -0.4
281,864 + MPMX20_00264 0.42 -0.5
281,864 + MPMX20_00264 0.42 -2.0
281,874 - MPMX20_00264 0.43 +0.5
281,894 + MPMX20_00264 0.44 +1.6
281,899 + MPMX20_00264 0.45 -2.3
281,899 + MPMX20_00264 0.45 +0.0
281,902 - MPMX20_00264 0.45 +0.7
281,907 - MPMX20_00264 0.45 -0.1
281,907 - MPMX20_00264 0.45 -0.8
281,909 - MPMX20_00264 0.45 +0.3
281,911 + MPMX20_00264 0.46 -1.7
281,911 + MPMX20_00264 0.46 +0.4
281,911 + MPMX20_00264 0.46 +0.3
281,914 - MPMX20_00264 0.46 +0.5
281,919 - MPMX20_00264 0.46 -0.0
282,002 - MPMX20_00264 0.52 -0.1
282,025 + MPMX20_00264 0.54 -0.1
282,043 - MPMX20_00264 0.56 -0.4
282,047 + MPMX20_00264 0.56 +0.5
282,055 - MPMX20_00264 0.57 +0.1
282,122 - MPMX20_00264 0.62 -1.5

Or see this region's nucleotide sequence