Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03226

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03224 and MPMX20_03225 are separated by 92 nucleotidesMPMX20_03225 and MPMX20_03226 are separated by 337 nucleotidesMPMX20_03226 and MPMX20_03227 are separated by 76 nucleotides MPMX20_03224: MPMX20_03224 - hypothetical protein, at 3,397,071 to 3,397,565 _03224 MPMX20_03225: MPMX20_03225 - hypothetical protein, at 3,397,658 to 3,398,113 _03225 MPMX20_03226: MPMX20_03226 - Acetate kinase, at 3,398,451 to 3,399,653 _03226 MPMX20_03227: MPMX20_03227 - Phosphate acetyltransferase, at 3,399,730 to 3,401,871 _03227 Position (kb) 3398 3399 3400Strain fitness (log2 ratio) -3 -2 -1 0 1at 3397.497 kb on - strand, within MPMX20_03224at 3397.562 kb on - strandat 3397.576 kb on - strandat 3397.591 kb on - strandat 3397.613 kb on + strandat 3397.617 kb on + strandat 3397.718 kb on - strand, within MPMX20_03225at 3397.747 kb on - strand, within MPMX20_03225at 3397.753 kb on - strand, within MPMX20_03225at 3397.815 kb on + strand, within MPMX20_03225at 3397.850 kb on + strand, within MPMX20_03225at 3397.910 kb on - strand, within MPMX20_03225at 3397.910 kb on - strand, within MPMX20_03225at 3397.939 kb on + strand, within MPMX20_03225at 3398.013 kb on - strand, within MPMX20_03225at 3398.057 kb on - strand, within MPMX20_03225at 3398.057 kb on - strand, within MPMX20_03225at 3398.103 kb on + strandat 3398.103 kb on + strandat 3398.177 kb on - strandat 3398.177 kb on - strandat 3398.253 kb on + strandat 3398.253 kb on - strandat 3398.469 kb on - strandat 3398.472 kb on + strandat 3398.480 kb on - strandat 3398.480 kb on - strandat 3398.519 kb on + strandat 3398.537 kb on + strandat 3398.653 kb on + strand, within MPMX20_03226at 3398.654 kb on - strand, within MPMX20_03226at 3398.683 kb on + strand, within MPMX20_03226at 3398.728 kb on - strand, within MPMX20_03226at 3398.735 kb on - strand, within MPMX20_03226at 3398.773 kb on + strand, within MPMX20_03226at 3398.819 kb on - strand, within MPMX20_03226at 3398.821 kb on + strand, within MPMX20_03226at 3398.824 kb on - strand, within MPMX20_03226at 3398.842 kb on - strand, within MPMX20_03226at 3398.956 kb on - strand, within MPMX20_03226at 3399.008 kb on + strand, within MPMX20_03226at 3399.044 kb on - strand, within MPMX20_03226at 3399.065 kb on + strand, within MPMX20_03226at 3399.178 kb on - strand, within MPMX20_03226at 3399.186 kb on - strand, within MPMX20_03226at 3399.213 kb on - strand, within MPMX20_03226at 3399.243 kb on - strand, within MPMX20_03226at 3399.313 kb on + strand, within MPMX20_03226at 3399.378 kb on - strand, within MPMX20_03226at 3399.463 kb on + strand, within MPMX20_03226at 3399.522 kb on - strand, within MPMX20_03226at 3399.553 kb on + strandat 3399.625 kb on - strandat 3399.684 kb on + strandat 3399.684 kb on + strandat 3399.684 kb on + strandat 3399.692 kb on - strandat 3399.767 kb on + strandat 3399.780 kb on - strandat 3399.782 kb on + strandat 3399.788 kb on + strandat 3399.790 kb on - strandat 3399.790 kb on - strandat 3399.821 kb on + strandat 3399.845 kb on - strandat 3399.883 kb on - strandat 3399.883 kb on - strandat 3399.926 kb on - strandat 3399.948 kb on + strand, within MPMX20_03227at 3400.016 kb on - strand, within MPMX20_03227at 3400.154 kb on - strand, within MPMX20_03227at 3400.157 kb on + strand, within MPMX20_03227at 3400.216 kb on - strand, within MPMX20_03227at 3400.291 kb on - strand, within MPMX20_03227at 3400.291 kb on - strand, within MPMX20_03227at 3400.291 kb on - strand, within MPMX20_03227at 3400.291 kb on - strand, within MPMX20_03227at 3400.329 kb on + strand, within MPMX20_03227at 3400.329 kb on + strand, within MPMX20_03227at 3400.370 kb on + strand, within MPMX20_03227at 3400.499 kb on - strand, within MPMX20_03227at 3400.574 kb on + strand, within MPMX20_03227

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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3,397,497 - MPMX20_03224 0.86 +0.1
3,397,562 - +0.2
3,397,576 - -1.8
3,397,591 - +0.2
3,397,613 + +0.1
3,397,617 + +0.9
3,397,718 - MPMX20_03225 0.13 +0.9
3,397,747 - MPMX20_03225 0.20 +0.2
3,397,753 - MPMX20_03225 0.21 +0.3
3,397,815 + MPMX20_03225 0.34 +0.9
3,397,850 + MPMX20_03225 0.42 -0.1
3,397,910 - MPMX20_03225 0.55 -0.0
3,397,910 - MPMX20_03225 0.55 +0.0
3,397,939 + MPMX20_03225 0.62 +1.2
3,398,013 - MPMX20_03225 0.78 -0.9
3,398,057 - MPMX20_03225 0.88 -0.9
3,398,057 - MPMX20_03225 0.88 +0.2
3,398,103 + +0.5
3,398,103 + -1.2
3,398,177 - +0.5
3,398,177 - -0.1
3,398,253 + -0.9
3,398,253 - -1.4
3,398,469 - -2.2
3,398,472 + -0.6
3,398,480 - +0.8
3,398,480 - -0.8
3,398,519 + -0.1
3,398,537 + -1.5
3,398,653 + MPMX20_03226 0.17 +0.7
3,398,654 - MPMX20_03226 0.17 +0.5
3,398,683 + MPMX20_03226 0.19 -0.5
3,398,728 - MPMX20_03226 0.23 +1.5
3,398,735 - MPMX20_03226 0.24 -1.1
3,398,773 + MPMX20_03226 0.27 -1.1
3,398,819 - MPMX20_03226 0.31 -0.9
3,398,821 + MPMX20_03226 0.31 -2.3
3,398,824 - MPMX20_03226 0.31 -1.1
3,398,842 - MPMX20_03226 0.33 -1.6
3,398,956 - MPMX20_03226 0.42 -0.5
3,399,008 + MPMX20_03226 0.46 -1.3
3,399,044 - MPMX20_03226 0.49 -0.5
3,399,065 + MPMX20_03226 0.51 -1.1
3,399,178 - MPMX20_03226 0.60 +0.5
3,399,186 - MPMX20_03226 0.61 -0.8
3,399,213 - MPMX20_03226 0.63 -0.3
3,399,243 - MPMX20_03226 0.66 -0.1
3,399,313 + MPMX20_03226 0.72 -0.1
3,399,378 - MPMX20_03226 0.77 -0.8
3,399,463 + MPMX20_03226 0.84 -1.5
3,399,522 - MPMX20_03226 0.89 -0.5
3,399,553 + -0.1
3,399,625 - +0.9
3,399,684 + -0.1
3,399,684 + +1.7
3,399,684 + -0.2
3,399,692 - -0.5
3,399,767 + -2.6
3,399,780 - -0.5
3,399,782 + -0.5
3,399,788 + -1.5
3,399,790 - -0.6
3,399,790 - -0.1
3,399,821 + -1.8
3,399,845 - -1.3
3,399,883 - -2.1
3,399,883 - -2.1
3,399,926 - +0.9
3,399,948 + MPMX20_03227 0.10 -0.6
3,400,016 - MPMX20_03227 0.13 +1.5
3,400,154 - MPMX20_03227 0.20 -1.8
3,400,157 + MPMX20_03227 0.20 -2.3
3,400,216 - MPMX20_03227 0.23 -3.4
3,400,291 - MPMX20_03227 0.26 -0.8
3,400,291 - MPMX20_03227 0.26 +0.5
3,400,291 - MPMX20_03227 0.26 +0.5
3,400,291 - MPMX20_03227 0.26 -0.8
3,400,329 + MPMX20_03227 0.28 +0.9
3,400,329 + MPMX20_03227 0.28 -0.1
3,400,370 + MPMX20_03227 0.30 +1.3
3,400,499 - MPMX20_03227 0.36 -1.1
3,400,574 + MPMX20_03227 0.39 -1.8

Or see this region's nucleotide sequence