Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02616 and MPMX20_02617 are separated by 309 nucleotides MPMX20_02617 and MPMX20_02618 overlap by 8 nucleotides MPMX20_02618 and MPMX20_02619 are separated by 3 nucleotides
MPMX20_02616: MPMX20_02616 - Nitrate/nitrite transporter NarK, at 2,754,553 to 2,755,950
_02616
MPMX20_02617: MPMX20_02617 - Nitrate/nitrite sensor protein NarX, at 2,756,260 to 2,758,056
_02617
MPMX20_02618: MPMX20_02618 - Nitrate/nitrite response regulator protein NarL, at 2,758,049 to 2,758,699
_02618
MPMX20_02619: MPMX20_02619 - Invasin, at 2,758,703 to 2,760,148
_02619
Position (kb)
2756
2757
2758
2759 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2755.270 kb on + strand, within MPMX20_02616 at 2755.270 kb on + strand, within MPMX20_02616 at 2755.278 kb on - strand, within MPMX20_02616 at 2755.459 kb on + strand, within MPMX20_02616 at 2755.462 kb on + strand, within MPMX20_02616 at 2755.497 kb on + strand, within MPMX20_02616 at 2755.502 kb on - strand, within MPMX20_02616 at 2755.536 kb on + strand, within MPMX20_02616 at 2755.536 kb on + strand, within MPMX20_02616 at 2755.566 kb on + strand, within MPMX20_02616 at 2755.571 kb on + strand, within MPMX20_02616 at 2755.571 kb on + strand, within MPMX20_02616 at 2755.579 kb on - strand, within MPMX20_02616 at 2755.579 kb on - strand, within MPMX20_02616 at 2755.584 kb on - strand, within MPMX20_02616 at 2755.591 kb on + strand, within MPMX20_02616 at 2755.649 kb on + strand, within MPMX20_02616 at 2755.665 kb on - strand, within MPMX20_02616 at 2755.784 kb on - strand, within MPMX20_02616 at 2755.789 kb on - strand, within MPMX20_02616 at 2755.789 kb on - strand, within MPMX20_02616 at 2755.839 kb on + strand at 2755.858 kb on - strand at 2755.946 kb on + strand at 2755.946 kb on + strand at 2755.954 kb on - strand at 2755.956 kb on + strand at 2755.956 kb on + strand at 2755.983 kb on + strand at 2756.065 kb on - strand at 2756.118 kb on - strand at 2756.118 kb on - strand at 2756.187 kb on + strand at 2756.188 kb on + strand at 2756.201 kb on - strand at 2756.206 kb on + strand at 2756.214 kb on - strand at 2756.214 kb on - strand at 2756.290 kb on - strand at 2756.312 kb on + strand at 2756.312 kb on + strand at 2756.320 kb on - strand at 2756.338 kb on - strand at 2756.363 kb on + strand at 2756.381 kb on - strand at 2756.382 kb on + strand at 2756.390 kb on - strand at 2756.435 kb on - strand at 2756.507 kb on + strand, within MPMX20_02617 at 2756.515 kb on - strand, within MPMX20_02617 at 2756.553 kb on + strand, within MPMX20_02617 at 2756.561 kb on - strand, within MPMX20_02617 at 2756.561 kb on - strand, within MPMX20_02617 at 2756.586 kb on + strand, within MPMX20_02617 at 2756.594 kb on - strand, within MPMX20_02617 at 2756.595 kb on - strand, within MPMX20_02617 at 2756.783 kb on + strand, within MPMX20_02617 at 2756.801 kb on + strand, within MPMX20_02617 at 2756.801 kb on - strand, within MPMX20_02617 at 2756.854 kb on - strand, within MPMX20_02617 at 2756.868 kb on - strand, within MPMX20_02617 at 2756.904 kb on + strand, within MPMX20_02617 at 2757.060 kb on + strand, within MPMX20_02617 at 2757.060 kb on + strand, within MPMX20_02617 at 2757.068 kb on - strand, within MPMX20_02617 at 2757.107 kb on + strand, within MPMX20_02617 at 2757.107 kb on + strand, within MPMX20_02617 at 2757.107 kb on + strand, within MPMX20_02617 at 2757.107 kb on + strand, within MPMX20_02617 at 2757.107 kb on + strand, within MPMX20_02617 at 2757.107 kb on + strand, within MPMX20_02617 at 2757.115 kb on - strand, within MPMX20_02617 at 2757.115 kb on - strand, within MPMX20_02617 at 2757.120 kb on + strand, within MPMX20_02617 at 2757.231 kb on - strand, within MPMX20_02617 at 2757.269 kb on + strand, within MPMX20_02617 at 2757.269 kb on + strand, within MPMX20_02617 at 2757.269 kb on + strand, within MPMX20_02617 at 2757.269 kb on + strand, within MPMX20_02617 at 2757.269 kb on + strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.277 kb on - strand, within MPMX20_02617 at 2757.284 kb on + strand, within MPMX20_02617 at 2757.339 kb on + strand, within MPMX20_02617 at 2757.363 kb on + strand, within MPMX20_02617 at 2757.584 kb on + strand, within MPMX20_02617 at 2757.627 kb on + strand, within MPMX20_02617 at 2757.629 kb on - strand, within MPMX20_02617 at 2757.640 kb on - strand, within MPMX20_02617 at 2757.640 kb on - strand, within MPMX20_02617 at 2757.640 kb on - strand, within MPMX20_02617 at 2757.645 kb on - strand, within MPMX20_02617 at 2757.657 kb on - strand, within MPMX20_02617 at 2757.733 kb on - strand, within MPMX20_02617 at 2757.738 kb on - strand, within MPMX20_02617 at 2757.742 kb on - strand, within MPMX20_02617 at 2757.745 kb on - strand, within MPMX20_02617 at 2757.775 kb on + strand, within MPMX20_02617 at 2757.775 kb on + strand, within MPMX20_02617 at 2757.775 kb on + strand, within MPMX20_02617 at 2757.775 kb on + strand, within MPMX20_02617 at 2757.783 kb on - strand, within MPMX20_02617 at 2757.867 kb on - strand, within MPMX20_02617 at 2757.938 kb on + strand at 2758.031 kb on - strand at 2758.031 kb on - strand at 2758.031 kb on - strand at 2758.036 kb on - strand at 2758.045 kb on + strand at 2758.177 kb on - strand, within MPMX20_02618 at 2758.256 kb on - strand, within MPMX20_02618 at 2758.396 kb on + strand, within MPMX20_02618 at 2758.404 kb on - strand, within MPMX20_02618 at 2758.404 kb on - strand, within MPMX20_02618 at 2758.404 kb on - strand, within MPMX20_02618 at 2758.404 kb on - strand, within MPMX20_02618 at 2758.404 kb on - strand, within MPMX20_02618 at 2758.479 kb on - strand, within MPMX20_02618 at 2758.520 kb on - strand, within MPMX20_02618 at 2758.558 kb on - strand, within MPMX20_02618 at 2758.558 kb on - strand, within MPMX20_02618 at 2758.584 kb on + strand, within MPMX20_02618 at 2758.674 kb on + strand at 2758.674 kb on + strand at 2758.742 kb on + strand at 2758.960 kb on + strand, within MPMX20_02619 at 2759.012 kb on - strand, within MPMX20_02619 at 2759.049 kb on - strand, within MPMX20_02619
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,755,270 + MPMX20_02616 0.51 -0.6 2,755,270 + MPMX20_02616 0.51 +0.8 2,755,278 - MPMX20_02616 0.52 -0.8 2,755,459 + MPMX20_02616 0.65 +0.2 2,755,462 + MPMX20_02616 0.65 +0.1 2,755,497 + MPMX20_02616 0.68 +2.4 2,755,502 - MPMX20_02616 0.68 +2.2 2,755,536 + MPMX20_02616 0.70 +1.4 2,755,536 + MPMX20_02616 0.70 +1.2 2,755,566 + MPMX20_02616 0.72 +0.2 2,755,571 + MPMX20_02616 0.73 -0.6 2,755,571 + MPMX20_02616 0.73 -0.4 2,755,579 - MPMX20_02616 0.73 +0.8 2,755,579 - MPMX20_02616 0.73 +0.8 2,755,584 - MPMX20_02616 0.74 -0.3 2,755,591 + MPMX20_02616 0.74 +0.4 2,755,649 + MPMX20_02616 0.78 +0.9 2,755,665 - MPMX20_02616 0.80 +0.7 2,755,784 - MPMX20_02616 0.88 +1.9 2,755,789 - MPMX20_02616 0.88 +0.6 2,755,789 - MPMX20_02616 0.88 +1.2 2,755,839 + -0.7 2,755,858 - +0.2 2,755,946 + -0.8 2,755,946 + +0.1 2,755,954 - +0.4 2,755,956 + +0.9 2,755,956 + -0.2 2,755,983 + +1.8 2,756,065 - -0.2 2,756,118 - +0.2 2,756,118 - +0.5 2,756,187 + +0.2 2,756,188 + -0.9 2,756,201 - -0.2 2,756,206 + +0.4 2,756,214 - +0.4 2,756,214 - -0.8 2,756,290 - +0.8 2,756,312 + +0.1 2,756,312 + +0.3 2,756,320 - -0.3 2,756,338 - +1.0 2,756,363 + +0.2 2,756,381 - +0.7 2,756,382 + +0.2 2,756,390 - -2.5 2,756,435 - -0.7 2,756,507 + MPMX20_02617 0.14 +0.2 2,756,515 - MPMX20_02617 0.14 +0.2 2,756,553 + MPMX20_02617 0.16 +0.4 2,756,561 - MPMX20_02617 0.17 -0.0 2,756,561 - MPMX20_02617 0.17 +0.3 2,756,586 + MPMX20_02617 0.18 -0.4 2,756,594 - MPMX20_02617 0.19 -0.2 2,756,595 - MPMX20_02617 0.19 -1.6 2,756,783 + MPMX20_02617 0.29 +0.0 2,756,801 + MPMX20_02617 0.30 +0.0 2,756,801 - MPMX20_02617 0.30 +0.3 2,756,854 - MPMX20_02617 0.33 +0.7 2,756,868 - MPMX20_02617 0.34 -1.0 2,756,904 + MPMX20_02617 0.36 +0.6 2,757,060 + MPMX20_02617 0.45 +1.3 2,757,060 + MPMX20_02617 0.45 +0.5 2,757,068 - MPMX20_02617 0.45 +0.3 2,757,107 + MPMX20_02617 0.47 +0.3 2,757,107 + MPMX20_02617 0.47 +0.3 2,757,107 + MPMX20_02617 0.47 -0.4 2,757,107 + MPMX20_02617 0.47 -0.1 2,757,107 + MPMX20_02617 0.47 -2.5 2,757,107 + MPMX20_02617 0.47 +2.0 2,757,115 - MPMX20_02617 0.48 +3.0 2,757,115 - MPMX20_02617 0.48 +1.1 2,757,120 + MPMX20_02617 0.48 -1.8 2,757,231 - MPMX20_02617 0.54 -0.6 2,757,269 + MPMX20_02617 0.56 +1.4 2,757,269 + MPMX20_02617 0.56 +0.0 2,757,269 + MPMX20_02617 0.56 +1.2 2,757,269 + MPMX20_02617 0.56 +0.9 2,757,269 + MPMX20_02617 0.56 +0.2 2,757,277 - MPMX20_02617 0.57 -1.1 2,757,277 - MPMX20_02617 0.57 +1.0 2,757,277 - MPMX20_02617 0.57 +1.2 2,757,277 - MPMX20_02617 0.57 -0.2 2,757,277 - MPMX20_02617 0.57 +2.3 2,757,277 - MPMX20_02617 0.57 +1.2 2,757,277 - MPMX20_02617 0.57 -0.1 2,757,284 + MPMX20_02617 0.57 -0.3 2,757,339 + MPMX20_02617 0.60 -0.7 2,757,363 + MPMX20_02617 0.61 +0.0 2,757,584 + MPMX20_02617 0.74 +1.2 2,757,627 + MPMX20_02617 0.76 +0.6 2,757,629 - MPMX20_02617 0.76 +0.2 2,757,640 - MPMX20_02617 0.77 +1.8 2,757,640 - MPMX20_02617 0.77 +1.0 2,757,640 - MPMX20_02617 0.77 +0.4 2,757,645 - MPMX20_02617 0.77 +1.1 2,757,657 - MPMX20_02617 0.78 +0.2 2,757,733 - MPMX20_02617 0.82 +0.0 2,757,738 - MPMX20_02617 0.82 +0.4 2,757,742 - MPMX20_02617 0.82 +0.6 2,757,745 - MPMX20_02617 0.83 +0.0 2,757,775 + MPMX20_02617 0.84 +0.6 2,757,775 + MPMX20_02617 0.84 +0.0 2,757,775 + MPMX20_02617 0.84 +0.2 2,757,775 + MPMX20_02617 0.84 +0.3 2,757,783 - MPMX20_02617 0.85 +1.5 2,757,867 - MPMX20_02617 0.89 +0.4 2,757,938 + +0.9 2,758,031 - +1.1 2,758,031 - -0.1 2,758,031 - -0.2 2,758,036 - +0.8 2,758,045 + +1.8 2,758,177 - MPMX20_02618 0.20 -0.4 2,758,256 - MPMX20_02618 0.32 -0.2 2,758,396 + MPMX20_02618 0.53 -0.5 2,758,404 - MPMX20_02618 0.55 -0.7 2,758,404 - MPMX20_02618 0.55 +1.0 2,758,404 - MPMX20_02618 0.55 +0.5 2,758,404 - MPMX20_02618 0.55 +0.6 2,758,404 - MPMX20_02618 0.55 +0.6 2,758,479 - MPMX20_02618 0.66 +0.8 2,758,520 - MPMX20_02618 0.72 -0.1 2,758,558 - MPMX20_02618 0.78 -0.4 2,758,558 - MPMX20_02618 0.78 +2.1 2,758,584 + MPMX20_02618 0.82 -0.5 2,758,674 + -0.3 2,758,674 + +0.8 2,758,742 + +1.2 2,758,960 + MPMX20_02619 0.18 +1.3 2,759,012 - MPMX20_02619 0.21 -0.4 2,759,049 - MPMX20_02619 0.24 +1.4
Or see this region's nucleotide sequence