Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01395 and MPMX20_01396 are separated by 224 nucleotides MPMX20_01396 and MPMX20_01397 overlap by 4 nucleotides MPMX20_01397 and MPMX20_01398 are separated by 19 nucleotides
MPMX20_01395: MPMX20_01395 - Putative acyl-CoA thioester hydrolase YbhC, at 1,456,908 to 1,458,191
_01395
MPMX20_01396: MPMX20_01396 - Imidazolonepropionase, at 1,458,416 to 1,459,639
_01396
MPMX20_01397: MPMX20_01397 - Formimidoylglutamase, at 1,459,636 to 1,460,574
_01397
MPMX20_01398: MPMX20_01398 - HTH-type transcriptional repressor NagR, at 1,460,594 to 1,461,328
_01398
Position (kb)
1458
1459
1460 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1457.493 kb on - strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.508 kb on + strand, within MPMX20_01395 at 1457.511 kb on - strand, within MPMX20_01395 at 1457.519 kb on + strand, within MPMX20_01395 at 1457.524 kb on + strand, within MPMX20_01395 at 1457.612 kb on - strand, within MPMX20_01395 at 1457.612 kb on - strand, within MPMX20_01395 at 1457.640 kb on - strand, within MPMX20_01395 at 1457.676 kb on + strand, within MPMX20_01395 at 1457.768 kb on + strand, within MPMX20_01395 at 1457.781 kb on - strand, within MPMX20_01395 at 1457.781 kb on - strand, within MPMX20_01395 at 1457.791 kb on - strand, within MPMX20_01395 at 1457.791 kb on - strand, within MPMX20_01395 at 1457.845 kb on + strand, within MPMX20_01395 at 1457.850 kb on + strand, within MPMX20_01395 at 1457.858 kb on - strand, within MPMX20_01395 at 1457.913 kb on + strand, within MPMX20_01395 at 1457.922 kb on + strand, within MPMX20_01395 at 1457.993 kb on - strand, within MPMX20_01395 at 1457.995 kb on + strand, within MPMX20_01395 at 1457.995 kb on + strand, within MPMX20_01395 at 1457.995 kb on + strand, within MPMX20_01395 at 1458.001 kb on + strand, within MPMX20_01395 at 1458.003 kb on - strand, within MPMX20_01395 at 1458.003 kb on - strand, within MPMX20_01395 at 1458.023 kb on - strand, within MPMX20_01395 at 1458.081 kb on - strand at 1458.100 kb on - strand at 1458.116 kb on + strand at 1458.124 kb on - strand at 1458.124 kb on - strand at 1458.143 kb on + strand at 1458.150 kb on + strand at 1458.191 kb on + strand at 1458.192 kb on + strand at 1458.198 kb on + strand at 1458.198 kb on + strand at 1458.198 kb on + strand at 1458.199 kb on + strand at 1458.206 kb on - strand at 1458.206 kb on - strand at 1458.206 kb on - strand at 1458.289 kb on - strand at 1458.348 kb on - strand at 1458.362 kb on + strand at 1458.422 kb on - strand at 1458.446 kb on - strand at 1458.516 kb on + strand at 1458.516 kb on + strand at 1458.524 kb on - strand at 1458.524 kb on - strand at 1458.588 kb on + strand, within MPMX20_01396 at 1458.593 kb on + strand, within MPMX20_01396 at 1458.603 kb on + strand, within MPMX20_01396 at 1458.615 kb on + strand, within MPMX20_01396 at 1458.647 kb on - strand, within MPMX20_01396 at 1458.680 kb on - strand, within MPMX20_01396 at 1458.680 kb on - strand, within MPMX20_01396 at 1458.760 kb on - strand, within MPMX20_01396 at 1458.788 kb on + strand, within MPMX20_01396 at 1458.796 kb on - strand, within MPMX20_01396 at 1458.824 kb on - strand, within MPMX20_01396 at 1458.920 kb on + strand, within MPMX20_01396 at 1458.928 kb on - strand, within MPMX20_01396 at 1458.930 kb on + strand, within MPMX20_01396 at 1458.938 kb on - strand, within MPMX20_01396 at 1458.999 kb on + strand, within MPMX20_01396 at 1459.002 kb on - strand, within MPMX20_01396 at 1459.002 kb on - strand, within MPMX20_01396 at 1459.012 kb on + strand, within MPMX20_01396 at 1459.012 kb on + strand, within MPMX20_01396 at 1459.063 kb on - strand, within MPMX20_01396 at 1459.078 kb on - strand, within MPMX20_01396 at 1459.121 kb on + strand, within MPMX20_01396 at 1459.129 kb on - strand, within MPMX20_01396 at 1459.186 kb on - strand, within MPMX20_01396 at 1459.209 kb on - strand, within MPMX20_01396 at 1459.247 kb on - strand, within MPMX20_01396 at 1459.261 kb on + strand, within MPMX20_01396 at 1459.310 kb on + strand, within MPMX20_01396 at 1459.341 kb on - strand, within MPMX20_01396 at 1459.380 kb on - strand, within MPMX20_01396 at 1459.426 kb on - strand, within MPMX20_01396 at 1459.426 kb on - strand, within MPMX20_01396 at 1459.464 kb on - strand, within MPMX20_01396 at 1459.466 kb on + strand, within MPMX20_01396 at 1459.469 kb on - strand, within MPMX20_01396 at 1459.503 kb on + strand, within MPMX20_01396 at 1459.533 kb on - strand at 1459.533 kb on - strand at 1459.640 kb on - strand at 1459.640 kb on - strand at 1459.690 kb on + strand at 1459.802 kb on + strand, within MPMX20_01397 at 1459.818 kb on + strand, within MPMX20_01397 at 1459.820 kb on - strand, within MPMX20_01397 at 1459.868 kb on + strand, within MPMX20_01397 at 1459.890 kb on - strand, within MPMX20_01397 at 1459.966 kb on + strand, within MPMX20_01397 at 1459.981 kb on - strand, within MPMX20_01397 at 1460.047 kb on + strand, within MPMX20_01397 at 1460.055 kb on - strand, within MPMX20_01397 at 1460.099 kb on + strand, within MPMX20_01397 at 1460.099 kb on + strand, within MPMX20_01397 at 1460.099 kb on + strand, within MPMX20_01397 at 1460.099 kb on + strand, within MPMX20_01397 at 1460.107 kb on - strand, within MPMX20_01397 at 1460.109 kb on + strand, within MPMX20_01397 at 1460.165 kb on + strand, within MPMX20_01397 at 1460.168 kb on - strand, within MPMX20_01397 at 1460.206 kb on - strand, within MPMX20_01397 at 1460.211 kb on - strand, within MPMX20_01397 at 1460.268 kb on + strand, within MPMX20_01397 at 1460.276 kb on - strand, within MPMX20_01397 at 1460.296 kb on - strand, within MPMX20_01397 at 1460.305 kb on + strand, within MPMX20_01397 at 1460.310 kb on + strand, within MPMX20_01397 at 1460.313 kb on - strand, within MPMX20_01397 at 1460.348 kb on + strand, within MPMX20_01397 at 1460.404 kb on + strand, within MPMX20_01397 at 1460.456 kb on - strand, within MPMX20_01397 at 1460.523 kb on + strand at 1460.562 kb on + strand at 1460.575 kb on - strand at 1460.586 kb on - strand at 1460.586 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,457,493 - MPMX20_01395 0.46 +1.0 1,457,495 + MPMX20_01395 0.46 +0.9 1,457,495 + MPMX20_01395 0.46 +0.2 1,457,495 + MPMX20_01395 0.46 -0.4 1,457,495 + MPMX20_01395 0.46 +0.2 1,457,503 - MPMX20_01395 0.46 -0.8 1,457,503 - MPMX20_01395 0.46 +0.9 1,457,503 - MPMX20_01395 0.46 -1.8 1,457,503 - MPMX20_01395 0.46 -0.5 1,457,508 + MPMX20_01395 0.47 -1.4 1,457,511 - MPMX20_01395 0.47 +0.3 1,457,519 + MPMX20_01395 0.48 +0.0 1,457,524 + MPMX20_01395 0.48 +0.9 1,457,612 - MPMX20_01395 0.55 +0.8 1,457,612 - MPMX20_01395 0.55 +1.0 1,457,640 - MPMX20_01395 0.57 +0.3 1,457,676 + MPMX20_01395 0.60 -1.4 1,457,768 + MPMX20_01395 0.67 +1.6 1,457,781 - MPMX20_01395 0.68 +0.3 1,457,781 - MPMX20_01395 0.68 -0.2 1,457,791 - MPMX20_01395 0.69 +0.0 1,457,791 - MPMX20_01395 0.69 +0.6 1,457,845 + MPMX20_01395 0.73 +1.0 1,457,850 + MPMX20_01395 0.73 +0.1 1,457,858 - MPMX20_01395 0.74 +0.9 1,457,913 + MPMX20_01395 0.78 +0.6 1,457,922 + MPMX20_01395 0.79 +0.3 1,457,993 - MPMX20_01395 0.85 +0.1 1,457,995 + MPMX20_01395 0.85 +0.5 1,457,995 + MPMX20_01395 0.85 -0.1 1,457,995 + MPMX20_01395 0.85 -0.9 1,458,001 + MPMX20_01395 0.85 +0.1 1,458,003 - MPMX20_01395 0.85 +1.8 1,458,003 - MPMX20_01395 0.85 +0.2 1,458,023 - MPMX20_01395 0.87 -0.6 1,458,081 - -1.0 1,458,100 - -0.3 1,458,116 + -1.6 1,458,124 - -0.3 1,458,124 - -1.3 1,458,143 + +0.1 1,458,150 + -1.2 1,458,191 + -0.8 1,458,192 + +0.2 1,458,198 + -1.3 1,458,198 + -0.3 1,458,198 + -0.5 1,458,199 + +0.5 1,458,206 - +0.3 1,458,206 - -0.8 1,458,206 - +0.2 1,458,289 - +0.1 1,458,348 - +0.9 1,458,362 + -1.6 1,458,422 - +0.3 1,458,446 - -0.4 1,458,516 + -0.0 1,458,516 + -1.1 1,458,524 - -0.1 1,458,524 - +1.0 1,458,588 + MPMX20_01396 0.14 -1.4 1,458,593 + MPMX20_01396 0.14 +0.2 1,458,603 + MPMX20_01396 0.15 -0.4 1,458,615 + MPMX20_01396 0.16 -0.1 1,458,647 - MPMX20_01396 0.19 -1.1 1,458,680 - MPMX20_01396 0.22 -0.2 1,458,680 - MPMX20_01396 0.22 -1.6 1,458,760 - MPMX20_01396 0.28 -0.9 1,458,788 + MPMX20_01396 0.30 +0.4 1,458,796 - MPMX20_01396 0.31 -0.4 1,458,824 - MPMX20_01396 0.33 +0.3 1,458,920 + MPMX20_01396 0.41 -0.4 1,458,928 - MPMX20_01396 0.42 -1.4 1,458,930 + MPMX20_01396 0.42 -1.7 1,458,938 - MPMX20_01396 0.43 +0.7 1,458,999 + MPMX20_01396 0.48 -1.4 1,459,002 - MPMX20_01396 0.48 -0.4 1,459,002 - MPMX20_01396 0.48 +1.4 1,459,012 + MPMX20_01396 0.49 -0.1 1,459,012 + MPMX20_01396 0.49 +1.0 1,459,063 - MPMX20_01396 0.53 +0.7 1,459,078 - MPMX20_01396 0.54 +0.2 1,459,121 + MPMX20_01396 0.58 -0.4 1,459,129 - MPMX20_01396 0.58 +0.8 1,459,186 - MPMX20_01396 0.63 -0.4 1,459,209 - MPMX20_01396 0.65 +1.8 1,459,247 - MPMX20_01396 0.68 -0.0 1,459,261 + MPMX20_01396 0.69 -1.6 1,459,310 + MPMX20_01396 0.73 -0.1 1,459,341 - MPMX20_01396 0.76 +0.3 1,459,380 - MPMX20_01396 0.79 +0.7 1,459,426 - MPMX20_01396 0.83 +0.4 1,459,426 - MPMX20_01396 0.83 +0.9 1,459,464 - MPMX20_01396 0.86 +0.8 1,459,466 + MPMX20_01396 0.86 -0.6 1,459,469 - MPMX20_01396 0.86 +1.5 1,459,503 + MPMX20_01396 0.89 -1.3 1,459,533 - -1.4 1,459,533 - +1.5 1,459,640 - -0.5 1,459,640 - -0.6 1,459,690 + -2.1 1,459,802 + MPMX20_01397 0.18 +0.1 1,459,818 + MPMX20_01397 0.19 -0.2 1,459,820 - MPMX20_01397 0.20 -1.2 1,459,868 + MPMX20_01397 0.25 +2.1 1,459,890 - MPMX20_01397 0.27 +0.5 1,459,966 + MPMX20_01397 0.35 +0.5 1,459,981 - MPMX20_01397 0.37 -0.3 1,460,047 + MPMX20_01397 0.44 +0.7 1,460,055 - MPMX20_01397 0.45 +0.5 1,460,099 + MPMX20_01397 0.49 -2.3 1,460,099 + MPMX20_01397 0.49 -0.5 1,460,099 + MPMX20_01397 0.49 +0.6 1,460,099 + MPMX20_01397 0.49 -0.3 1,460,107 - MPMX20_01397 0.50 -1.4 1,460,109 + MPMX20_01397 0.50 +0.6 1,460,165 + MPMX20_01397 0.56 -0.3 1,460,168 - MPMX20_01397 0.57 +0.9 1,460,206 - MPMX20_01397 0.61 -1.4 1,460,211 - MPMX20_01397 0.61 -3.1 1,460,268 + MPMX20_01397 0.67 +0.6 1,460,276 - MPMX20_01397 0.68 +0.2 1,460,296 - MPMX20_01397 0.70 -0.5 1,460,305 + MPMX20_01397 0.71 +0.6 1,460,310 + MPMX20_01397 0.72 -0.6 1,460,313 - MPMX20_01397 0.72 +0.7 1,460,348 + MPMX20_01397 0.76 -0.8 1,460,404 + MPMX20_01397 0.82 +1.1 1,460,456 - MPMX20_01397 0.87 -1.1 1,460,523 + +0.0 1,460,562 + +2.4 1,460,575 - +0.7 1,460,586 - +1.6 1,460,586 - +0.7
Or see this region's nucleotide sequence