Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01396

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01395 and MPMX20_01396 are separated by 224 nucleotidesMPMX20_01396 and MPMX20_01397 overlap by 4 nucleotidesMPMX20_01397 and MPMX20_01398 are separated by 19 nucleotides MPMX20_01395: MPMX20_01395 - Putative acyl-CoA thioester hydrolase YbhC, at 1,456,908 to 1,458,191 _01395 MPMX20_01396: MPMX20_01396 - Imidazolonepropionase, at 1,458,416 to 1,459,639 _01396 MPMX20_01397: MPMX20_01397 - Formimidoylglutamase, at 1,459,636 to 1,460,574 _01397 MPMX20_01398: MPMX20_01398 - HTH-type transcriptional repressor NagR, at 1,460,594 to 1,461,328 _01398 Position (kb) 1458 1459 1460Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1457.493 kb on - strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.495 kb on + strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.503 kb on - strand, within MPMX20_01395at 1457.508 kb on + strand, within MPMX20_01395at 1457.511 kb on - strand, within MPMX20_01395at 1457.519 kb on + strand, within MPMX20_01395at 1457.524 kb on + strand, within MPMX20_01395at 1457.612 kb on - strand, within MPMX20_01395at 1457.612 kb on - strand, within MPMX20_01395at 1457.640 kb on - strand, within MPMX20_01395at 1457.676 kb on + strand, within MPMX20_01395at 1457.768 kb on + strand, within MPMX20_01395at 1457.781 kb on - strand, within MPMX20_01395at 1457.781 kb on - strand, within MPMX20_01395at 1457.791 kb on - strand, within MPMX20_01395at 1457.791 kb on - strand, within MPMX20_01395at 1457.845 kb on + strand, within MPMX20_01395at 1457.850 kb on + strand, within MPMX20_01395at 1457.858 kb on - strand, within MPMX20_01395at 1457.913 kb on + strand, within MPMX20_01395at 1457.922 kb on + strand, within MPMX20_01395at 1457.993 kb on - strand, within MPMX20_01395at 1457.995 kb on + strand, within MPMX20_01395at 1457.995 kb on + strand, within MPMX20_01395at 1457.995 kb on + strand, within MPMX20_01395at 1458.001 kb on + strand, within MPMX20_01395at 1458.003 kb on - strand, within MPMX20_01395at 1458.003 kb on - strand, within MPMX20_01395at 1458.023 kb on - strand, within MPMX20_01395at 1458.081 kb on - strandat 1458.100 kb on - strandat 1458.116 kb on + strandat 1458.124 kb on - strandat 1458.124 kb on - strandat 1458.143 kb on + strandat 1458.150 kb on + strandat 1458.191 kb on + strandat 1458.192 kb on + strandat 1458.198 kb on + strandat 1458.198 kb on + strandat 1458.198 kb on + strandat 1458.199 kb on + strandat 1458.206 kb on - strandat 1458.206 kb on - strandat 1458.206 kb on - strandat 1458.289 kb on - strandat 1458.348 kb on - strandat 1458.362 kb on + strandat 1458.422 kb on - strandat 1458.446 kb on - strandat 1458.516 kb on + strandat 1458.516 kb on + strandat 1458.524 kb on - strandat 1458.524 kb on - strandat 1458.588 kb on + strand, within MPMX20_01396at 1458.593 kb on + strand, within MPMX20_01396at 1458.603 kb on + strand, within MPMX20_01396at 1458.615 kb on + strand, within MPMX20_01396at 1458.647 kb on - strand, within MPMX20_01396at 1458.680 kb on - strand, within MPMX20_01396at 1458.680 kb on - strand, within MPMX20_01396at 1458.760 kb on - strand, within MPMX20_01396at 1458.788 kb on + strand, within MPMX20_01396at 1458.796 kb on - strand, within MPMX20_01396at 1458.824 kb on - strand, within MPMX20_01396at 1458.920 kb on + strand, within MPMX20_01396at 1458.928 kb on - strand, within MPMX20_01396at 1458.930 kb on + strand, within MPMX20_01396at 1458.938 kb on - strand, within MPMX20_01396at 1458.999 kb on + strand, within MPMX20_01396at 1459.002 kb on - strand, within MPMX20_01396at 1459.002 kb on - strand, within MPMX20_01396at 1459.012 kb on + strand, within MPMX20_01396at 1459.012 kb on + strand, within MPMX20_01396at 1459.063 kb on - strand, within MPMX20_01396at 1459.078 kb on - strand, within MPMX20_01396at 1459.121 kb on + strand, within MPMX20_01396at 1459.129 kb on - strand, within MPMX20_01396at 1459.186 kb on - strand, within MPMX20_01396at 1459.209 kb on - strand, within MPMX20_01396at 1459.247 kb on - strand, within MPMX20_01396at 1459.261 kb on + strand, within MPMX20_01396at 1459.310 kb on + strand, within MPMX20_01396at 1459.341 kb on - strand, within MPMX20_01396at 1459.380 kb on - strand, within MPMX20_01396at 1459.426 kb on - strand, within MPMX20_01396at 1459.426 kb on - strand, within MPMX20_01396at 1459.464 kb on - strand, within MPMX20_01396at 1459.466 kb on + strand, within MPMX20_01396at 1459.469 kb on - strand, within MPMX20_01396at 1459.503 kb on + strand, within MPMX20_01396at 1459.533 kb on - strandat 1459.533 kb on - strandat 1459.640 kb on - strandat 1459.640 kb on - strandat 1459.690 kb on + strandat 1459.802 kb on + strand, within MPMX20_01397at 1459.818 kb on + strand, within MPMX20_01397at 1459.820 kb on - strand, within MPMX20_01397at 1459.868 kb on + strand, within MPMX20_01397at 1459.890 kb on - strand, within MPMX20_01397at 1459.966 kb on + strand, within MPMX20_01397at 1459.981 kb on - strand, within MPMX20_01397at 1460.047 kb on + strand, within MPMX20_01397at 1460.055 kb on - strand, within MPMX20_01397at 1460.099 kb on + strand, within MPMX20_01397at 1460.099 kb on + strand, within MPMX20_01397at 1460.099 kb on + strand, within MPMX20_01397at 1460.099 kb on + strand, within MPMX20_01397at 1460.107 kb on - strand, within MPMX20_01397at 1460.109 kb on + strand, within MPMX20_01397at 1460.165 kb on + strand, within MPMX20_01397at 1460.168 kb on - strand, within MPMX20_01397at 1460.206 kb on - strand, within MPMX20_01397at 1460.211 kb on - strand, within MPMX20_01397at 1460.268 kb on + strand, within MPMX20_01397at 1460.276 kb on - strand, within MPMX20_01397at 1460.296 kb on - strand, within MPMX20_01397at 1460.305 kb on + strand, within MPMX20_01397at 1460.310 kb on + strand, within MPMX20_01397at 1460.313 kb on - strand, within MPMX20_01397at 1460.348 kb on + strand, within MPMX20_01397at 1460.404 kb on + strand, within MPMX20_01397at 1460.456 kb on - strand, within MPMX20_01397at 1460.523 kb on + strandat 1460.562 kb on + strandat 1460.575 kb on - strandat 1460.586 kb on - strandat 1460.586 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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1,457,493 - MPMX20_01395 0.46 +1.0
1,457,495 + MPMX20_01395 0.46 +0.9
1,457,495 + MPMX20_01395 0.46 +0.2
1,457,495 + MPMX20_01395 0.46 -0.4
1,457,495 + MPMX20_01395 0.46 +0.2
1,457,503 - MPMX20_01395 0.46 -0.8
1,457,503 - MPMX20_01395 0.46 +0.9
1,457,503 - MPMX20_01395 0.46 -1.8
1,457,503 - MPMX20_01395 0.46 -0.5
1,457,508 + MPMX20_01395 0.47 -1.4
1,457,511 - MPMX20_01395 0.47 +0.3
1,457,519 + MPMX20_01395 0.48 +0.0
1,457,524 + MPMX20_01395 0.48 +0.9
1,457,612 - MPMX20_01395 0.55 +0.8
1,457,612 - MPMX20_01395 0.55 +1.0
1,457,640 - MPMX20_01395 0.57 +0.3
1,457,676 + MPMX20_01395 0.60 -1.4
1,457,768 + MPMX20_01395 0.67 +1.6
1,457,781 - MPMX20_01395 0.68 +0.3
1,457,781 - MPMX20_01395 0.68 -0.2
1,457,791 - MPMX20_01395 0.69 +0.0
1,457,791 - MPMX20_01395 0.69 +0.6
1,457,845 + MPMX20_01395 0.73 +1.0
1,457,850 + MPMX20_01395 0.73 +0.1
1,457,858 - MPMX20_01395 0.74 +0.9
1,457,913 + MPMX20_01395 0.78 +0.6
1,457,922 + MPMX20_01395 0.79 +0.3
1,457,993 - MPMX20_01395 0.85 +0.1
1,457,995 + MPMX20_01395 0.85 +0.5
1,457,995 + MPMX20_01395 0.85 -0.1
1,457,995 + MPMX20_01395 0.85 -0.9
1,458,001 + MPMX20_01395 0.85 +0.1
1,458,003 - MPMX20_01395 0.85 +1.8
1,458,003 - MPMX20_01395 0.85 +0.2
1,458,023 - MPMX20_01395 0.87 -0.6
1,458,081 - -1.0
1,458,100 - -0.3
1,458,116 + -1.6
1,458,124 - -0.3
1,458,124 - -1.3
1,458,143 + +0.1
1,458,150 + -1.2
1,458,191 + -0.8
1,458,192 + +0.2
1,458,198 + -1.3
1,458,198 + -0.3
1,458,198 + -0.5
1,458,199 + +0.5
1,458,206 - +0.3
1,458,206 - -0.8
1,458,206 - +0.2
1,458,289 - +0.1
1,458,348 - +0.9
1,458,362 + -1.6
1,458,422 - +0.3
1,458,446 - -0.4
1,458,516 + -0.0
1,458,516 + -1.1
1,458,524 - -0.1
1,458,524 - +1.0
1,458,588 + MPMX20_01396 0.14 -1.4
1,458,593 + MPMX20_01396 0.14 +0.2
1,458,603 + MPMX20_01396 0.15 -0.4
1,458,615 + MPMX20_01396 0.16 -0.1
1,458,647 - MPMX20_01396 0.19 -1.1
1,458,680 - MPMX20_01396 0.22 -0.2
1,458,680 - MPMX20_01396 0.22 -1.6
1,458,760 - MPMX20_01396 0.28 -0.9
1,458,788 + MPMX20_01396 0.30 +0.4
1,458,796 - MPMX20_01396 0.31 -0.4
1,458,824 - MPMX20_01396 0.33 +0.3
1,458,920 + MPMX20_01396 0.41 -0.4
1,458,928 - MPMX20_01396 0.42 -1.4
1,458,930 + MPMX20_01396 0.42 -1.7
1,458,938 - MPMX20_01396 0.43 +0.7
1,458,999 + MPMX20_01396 0.48 -1.4
1,459,002 - MPMX20_01396 0.48 -0.4
1,459,002 - MPMX20_01396 0.48 +1.4
1,459,012 + MPMX20_01396 0.49 -0.1
1,459,012 + MPMX20_01396 0.49 +1.0
1,459,063 - MPMX20_01396 0.53 +0.7
1,459,078 - MPMX20_01396 0.54 +0.2
1,459,121 + MPMX20_01396 0.58 -0.4
1,459,129 - MPMX20_01396 0.58 +0.8
1,459,186 - MPMX20_01396 0.63 -0.4
1,459,209 - MPMX20_01396 0.65 +1.8
1,459,247 - MPMX20_01396 0.68 -0.0
1,459,261 + MPMX20_01396 0.69 -1.6
1,459,310 + MPMX20_01396 0.73 -0.1
1,459,341 - MPMX20_01396 0.76 +0.3
1,459,380 - MPMX20_01396 0.79 +0.7
1,459,426 - MPMX20_01396 0.83 +0.4
1,459,426 - MPMX20_01396 0.83 +0.9
1,459,464 - MPMX20_01396 0.86 +0.8
1,459,466 + MPMX20_01396 0.86 -0.6
1,459,469 - MPMX20_01396 0.86 +1.5
1,459,503 + MPMX20_01396 0.89 -1.3
1,459,533 - -1.4
1,459,533 - +1.5
1,459,640 - -0.5
1,459,640 - -0.6
1,459,690 + -2.1
1,459,802 + MPMX20_01397 0.18 +0.1
1,459,818 + MPMX20_01397 0.19 -0.2
1,459,820 - MPMX20_01397 0.20 -1.2
1,459,868 + MPMX20_01397 0.25 +2.1
1,459,890 - MPMX20_01397 0.27 +0.5
1,459,966 + MPMX20_01397 0.35 +0.5
1,459,981 - MPMX20_01397 0.37 -0.3
1,460,047 + MPMX20_01397 0.44 +0.7
1,460,055 - MPMX20_01397 0.45 +0.5
1,460,099 + MPMX20_01397 0.49 -2.3
1,460,099 + MPMX20_01397 0.49 -0.5
1,460,099 + MPMX20_01397 0.49 +0.6
1,460,099 + MPMX20_01397 0.49 -0.3
1,460,107 - MPMX20_01397 0.50 -1.4
1,460,109 + MPMX20_01397 0.50 +0.6
1,460,165 + MPMX20_01397 0.56 -0.3
1,460,168 - MPMX20_01397 0.57 +0.9
1,460,206 - MPMX20_01397 0.61 -1.4
1,460,211 - MPMX20_01397 0.61 -3.1
1,460,268 + MPMX20_01397 0.67 +0.6
1,460,276 - MPMX20_01397 0.68 +0.2
1,460,296 - MPMX20_01397 0.70 -0.5
1,460,305 + MPMX20_01397 0.71 +0.6
1,460,310 + MPMX20_01397 0.72 -0.6
1,460,313 - MPMX20_01397 0.72 +0.7
1,460,348 + MPMX20_01397 0.76 -0.8
1,460,404 + MPMX20_01397 0.82 +1.1
1,460,456 - MPMX20_01397 0.87 -1.1
1,460,523 + +0.0
1,460,562 + +2.4
1,460,575 - +0.7
1,460,586 - +1.6
1,460,586 - +0.7

Or see this region's nucleotide sequence