Experiment: H2 no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMJJ_RS01930 and MMJJ_RS01935 are separated by 193 nucleotides MMJJ_RS01935 and MMJJ_RS01940 are separated by 17 nucleotides MMJJ_RS01940 and MMJJ_RS01945 are separated by 76 nucleotides
MMJJ_RS01930: MMJJ_RS01930 - Pre-mRNA processing ribonucleoprotein, at 369,558 to 370,988
_RS01930
MMJJ_RS01935: MMJJ_RS01935 - O-phosphoseryl-tRNA(Sec) selenium transferase, at 371,182 to 372,492
_RS01935
MMJJ_RS01940: MMJJ_RS01940 - hypothetical protein, at 372,510 to 373,076
_RS01940
MMJJ_RS01945: MMJJ_RS01945 - cell division ATPase MinD, at 373,153 to 373,938
_RS01945
Position (kb) 371
372
373 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 370.303 kb on + strand, within MMJJ_RS01930 at 370.474 kb on - strand, within MMJJ_RS01930 at 370.497 kb on + strand, within MMJJ_RS01930 at 370.516 kb on - strand, within MMJJ_RS01930 at 370.516 kb on - strand, within MMJJ_RS01930 at 370.519 kb on + strand, within MMJJ_RS01930 at 370.607 kb on - strand, within MMJJ_RS01930 at 370.608 kb on + strand, within MMJJ_RS01930 at 370.727 kb on + strand, within MMJJ_RS01930 at 370.770 kb on + strand, within MMJJ_RS01930 at 370.770 kb on + strand, within MMJJ_RS01930 at 370.773 kb on + strand, within MMJJ_RS01930 at 370.864 kb on + strand at 370.988 kb on - strand at 371.009 kb on + strand at 371.031 kb on - strand at 371.032 kb on + strand at 371.053 kb on - strand at 371.053 kb on - strand at 371.058 kb on + strand at 371.073 kb on - strand at 371.076 kb on - strand at 371.079 kb on - strand at 371.083 kb on - strand at 371.083 kb on - strand at 371.084 kb on + strand at 371.106 kb on + strand at 371.180 kb on - strand at 371.365 kb on + strand, within MMJJ_RS01935 at 371.410 kb on - strand, within MMJJ_RS01935 at 371.410 kb on - strand, within MMJJ_RS01935 at 371.657 kb on - strand, within MMJJ_RS01935 at 371.718 kb on - strand, within MMJJ_RS01935 at 371.758 kb on - strand, within MMJJ_RS01935 at 372.021 kb on + strand, within MMJJ_RS01935 at 372.050 kb on + strand, within MMJJ_RS01935 at 372.071 kb on - strand, within MMJJ_RS01935 at 372.126 kb on - strand, within MMJJ_RS01935 at 372.386 kb on + strand at 372.398 kb on + strand at 372.399 kb on - strand at 372.417 kb on + strand at 372.490 kb on - strand at 372.515 kb on + strand at 372.524 kb on - strand at 372.531 kb on - strand at 372.532 kb on + strand at 372.673 kb on - strand, within MMJJ_RS01940 at 372.680 kb on + strand, within MMJJ_RS01940 at 372.689 kb on - strand, within MMJJ_RS01940 at 372.746 kb on - strand, within MMJJ_RS01940 at 372.757 kb on - strand, within MMJJ_RS01940 at 372.758 kb on + strand, within MMJJ_RS01940 at 372.758 kb on + strand, within MMJJ_RS01940 at 372.758 kb on + strand, within MMJJ_RS01940 at 372.837 kb on - strand, within MMJJ_RS01940 at 372.837 kb on - strand, within MMJJ_RS01940 at 372.838 kb on + strand, within MMJJ_RS01940 at 372.839 kb on - strand, within MMJJ_RS01940 at 372.839 kb on - strand, within MMJJ_RS01940 at 372.839 kb on - strand, within MMJJ_RS01940 at 372.840 kb on + strand, within MMJJ_RS01940 at 372.912 kb on + strand, within MMJJ_RS01940 at 372.917 kb on - strand, within MMJJ_RS01940 at 372.924 kb on + strand, within MMJJ_RS01940 at 372.934 kb on + strand, within MMJJ_RS01940 at 372.936 kb on + strand, within MMJJ_RS01940 at 372.958 kb on - strand, within MMJJ_RS01940 at 372.965 kb on - strand, within MMJJ_RS01940 at 372.965 kb on - strand, within MMJJ_RS01940 at 372.968 kb on - strand, within MMJJ_RS01940 at 372.976 kb on - strand, within MMJJ_RS01940 at 372.990 kb on - strand, within MMJJ_RS01940 at 372.991 kb on + strand, within MMJJ_RS01940 at 372.991 kb on + strand, within MMJJ_RS01940 at 372.991 kb on + strand, within MMJJ_RS01940 at 372.991 kb on + strand, within MMJJ_RS01940 at 373.023 kb on + strand at 373.023 kb on + strand at 373.023 kb on + strand at 373.027 kb on + strand at 373.028 kb on - strand at 373.028 kb on - strand at 373.028 kb on - strand at 373.028 kb on - strand at 373.029 kb on + strand at 373.029 kb on + strand at 373.029 kb on + strand at 373.029 kb on + strand at 373.029 kb on + strand at 373.083 kb on - strand at 373.083 kb on - strand at 373.083 kb on - strand at 373.084 kb on + strand at 373.084 kb on + strand at 373.085 kb on - strand at 373.085 kb on - strand at 373.086 kb on + strand at 373.086 kb on + strand at 373.088 kb on + strand at 373.088 kb on + strand at 373.090 kb on - strand at 373.090 kb on - strand at 373.090 kb on - strand at 373.091 kb on + strand at 373.091 kb on + strand at 373.091 kb on + strand at 373.102 kb on + strand at 373.102 kb on + strand at 373.110 kb on + strand at 373.110 kb on + strand at 373.114 kb on - strand at 373.114 kb on - strand at 373.114 kb on - strand at 373.114 kb on - strand at 373.114 kb on - strand at 373.115 kb on + strand at 373.115 kb on + strand at 373.115 kb on + strand at 373.115 kb on + strand at 373.116 kb on - strand at 373.116 kb on - strand at 373.116 kb on - strand at 373.116 kb on - strand at 373.116 kb on - strand at 373.116 kb on - strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.117 kb on + strand at 373.118 kb on - strand at 373.119 kb on + strand at 373.119 kb on + strand at 373.119 kb on + strand at 373.119 kb on + strand at 373.119 kb on + strand at 373.119 kb on + strand at 373.124 kb on - strand at 373.124 kb on - strand at 373.124 kb on - strand at 373.124 kb on - strand at 373.125 kb on + strand at 373.125 kb on + strand at 373.125 kb on + strand at 373.129 kb on + strand at 373.161 kb on + strand at 373.254 kb on + strand, within MMJJ_RS01945 at 373.272 kb on - strand, within MMJJ_RS01945 at 373.272 kb on - strand, within MMJJ_RS01945 at 373.297 kb on + strand, within MMJJ_RS01945 at 373.297 kb on + strand, within MMJJ_RS01945 at 373.328 kb on - strand, within MMJJ_RS01945 at 373.328 kb on - strand, within MMJJ_RS01945 at 373.329 kb on + strand, within MMJJ_RS01945 at 373.359 kb on - strand, within MMJJ_RS01945 at 373.359 kb on - strand, within MMJJ_RS01945 at 373.359 kb on - strand, within MMJJ_RS01945 at 373.372 kb on - strand, within MMJJ_RS01945 at 373.372 kb on - strand, within MMJJ_RS01945 at 373.372 kb on - strand, within MMJJ_RS01945 at 373.391 kb on - strand, within MMJJ_RS01945
Per-strain Table
Position Strand Gene LocusTag Fraction H2 no stress control remove 370,303 + MMJJ_RS01930 0.52 -1.6 370,474 - MMJJ_RS01930 0.64 -1.5 370,497 + MMJJ_RS01930 0.66 -0.7 370,516 - MMJJ_RS01930 0.67 -0.6 370,516 - MMJJ_RS01930 0.67 -1.7 370,519 + MMJJ_RS01930 0.67 -2.1 370,607 - MMJJ_RS01930 0.73 -0.8 370,608 + MMJJ_RS01930 0.73 -1.8 370,727 + MMJJ_RS01930 0.82 -0.4 370,770 + MMJJ_RS01930 0.85 -1.7 370,770 + MMJJ_RS01930 0.85 -1.0 370,773 + MMJJ_RS01930 0.85 -1.3 370,864 + -0.4 370,988 - -0.6 371,009 + -1.0 371,031 - -1.1 371,032 + -1.1 371,053 - +0.2 371,053 - -0.6 371,058 + -0.3 371,073 - -0.3 371,076 - -0.0 371,079 - -0.6 371,083 - +0.1 371,083 - +0.3 371,084 + -0.4 371,106 + +0.1 371,180 - -1.9 371,365 + MMJJ_RS01935 0.14 -0.7 371,410 - MMJJ_RS01935 0.17 -4.9 371,410 - MMJJ_RS01935 0.17 -2.6 371,657 - MMJJ_RS01935 0.36 -2.4 371,718 - MMJJ_RS01935 0.41 -3.0 371,758 - MMJJ_RS01935 0.44 -3.6 372,021 + MMJJ_RS01935 0.64 -2.0 372,050 + MMJJ_RS01935 0.66 -2.2 372,071 - MMJJ_RS01935 0.68 -2.5 372,126 - MMJJ_RS01935 0.72 -2.0 372,386 + -1.9 372,398 + -3.2 372,399 - -3.0 372,417 + -2.2 372,490 - -0.3 372,515 + -0.7 372,524 - -0.7 372,531 - -0.1 372,532 + -0.2 372,673 - MMJJ_RS01940 0.29 -1.4 372,680 + MMJJ_RS01940 0.30 -1.6 372,689 - MMJJ_RS01940 0.32 -0.8 372,746 - MMJJ_RS01940 0.42 -0.7 372,757 - MMJJ_RS01940 0.44 -0.9 372,758 + MMJJ_RS01940 0.44 -0.7 372,758 + MMJJ_RS01940 0.44 -1.9 372,758 + MMJJ_RS01940 0.44 +0.3 372,837 - MMJJ_RS01940 0.58 -1.5 372,837 - MMJJ_RS01940 0.58 -0.4 372,838 + MMJJ_RS01940 0.58 -0.5 372,839 - MMJJ_RS01940 0.58 -1.1 372,839 - MMJJ_RS01940 0.58 -0.3 372,839 - MMJJ_RS01940 0.58 -0.3 372,840 + MMJJ_RS01940 0.58 -0.6 372,912 + MMJJ_RS01940 0.71 -1.1 372,917 - MMJJ_RS01940 0.72 -1.9 372,924 + MMJJ_RS01940 0.73 -0.7 372,934 + MMJJ_RS01940 0.75 -0.5 372,936 + MMJJ_RS01940 0.75 -0.3 372,958 - MMJJ_RS01940 0.79 -0.0 372,965 - MMJJ_RS01940 0.80 -0.5 372,965 - MMJJ_RS01940 0.80 -1.6 372,968 - MMJJ_RS01940 0.81 -0.5 372,976 - MMJJ_RS01940 0.82 -0.6 372,990 - MMJJ_RS01940 0.85 -1.0 372,991 + MMJJ_RS01940 0.85 -1.0 372,991 + MMJJ_RS01940 0.85 -0.6 372,991 + MMJJ_RS01940 0.85 -0.8 372,991 + MMJJ_RS01940 0.85 -1.0 373,023 + -0.9 373,023 + -1.4 373,023 + -0.7 373,027 + -0.9 373,028 - -1.0 373,028 - -0.8 373,028 - -0.2 373,028 - -0.9 373,029 + -0.3 373,029 + -0.6 373,029 + -0.5 373,029 + -0.4 373,029 + -0.9 373,083 - +0.2 373,083 - -0.1 373,083 - +0.6 373,084 + +0.1 373,084 + -0.2 373,085 - +0.0 373,085 - -0.2 373,086 + -0.4 373,086 + +0.0 373,088 + +0.6 373,088 + -0.1 373,090 - -0.6 373,090 - +0.6 373,090 - -0.6 373,091 + -0.3 373,091 + +0.6 373,091 + -0.0 373,102 + +0.1 373,102 + +0.3 373,110 + +0.9 373,110 + +0.0 373,114 - +0.2 373,114 - +0.9 373,114 - +0.3 373,114 - +0.1 373,114 - -0.1 373,115 + +0.1 373,115 + +0.2 373,115 + -0.2 373,115 + -0.1 373,116 - +0.1 373,116 - +0.5 373,116 - -0.1 373,116 - +0.1 373,116 - -0.1 373,116 - -0.1 373,117 + +0.2 373,117 + +0.1 373,117 + +0.1 373,117 + +0.5 373,117 + +0.5 373,117 + +0.5 373,117 + +0.3 373,117 + -0.3 373,117 + +0.4 373,117 + +0.8 373,117 + -0.6 373,118 - -0.1 373,119 + -0.9 373,119 + -0.0 373,119 + +0.1 373,119 + +0.2 373,119 + -0.4 373,119 + +0.1 373,124 - +0.0 373,124 - +0.1 373,124 - +0.3 373,124 - +0.4 373,125 + -0.2 373,125 + -0.0 373,125 + +0.4 373,129 + +0.8 373,161 + +0.4 373,254 + MMJJ_RS01945 0.13 -0.2 373,272 - MMJJ_RS01945 0.15 -0.5 373,272 - MMJJ_RS01945 0.15 +0.4 373,297 + MMJJ_RS01945 0.18 -0.1 373,297 + MMJJ_RS01945 0.18 +0.1 373,328 - MMJJ_RS01945 0.22 +0.9 373,328 - MMJJ_RS01945 0.22 -0.9 373,329 + MMJJ_RS01945 0.22 -0.6 373,359 - MMJJ_RS01945 0.26 +0.5 373,359 - MMJJ_RS01945 0.26 -0.2 373,359 - MMJJ_RS01945 0.26 +0.3 373,372 - MMJJ_RS01945 0.28 +0.4 373,372 - MMJJ_RS01945 0.28 -0.3 373,372 - MMJJ_RS01945 0.28 -0.1 373,391 - MMJJ_RS01945 0.30 -0.3
Or see this region's nucleotide sequence