Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS08290

Experiment: Formate no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate no stress control
1,526,950	+		MMJJ_RS08285	0.12	-0.6
1,526,950	+		MMJJ_RS08285	0.12	-0.1
1,526,953	-		MMJJ_RS08285	0.12	+0.4
1,526,953	-		MMJJ_RS08285	0.12	+0.3
1,526,954	+		MMJJ_RS08285	0.12	-0.0
1,526,954	+		MMJJ_RS08285	0.12	-0.0
1,526,965	-		MMJJ_RS08285	0.14	-0.1
1,526,966	+		MMJJ_RS08285	0.14	-0.2
1,526,966	+		MMJJ_RS08285	0.14	+0.3
1,526,999	+		MMJJ_RS08285	0.19	+0.7
1,527,068	+		MMJJ_RS08285	0.30	+0.2
1,527,096	-		MMJJ_RS08285	0.34	+0.1
1,527,098	-		MMJJ_RS08285	0.34	+0.6
1,527,098	-		MMJJ_RS08285	0.34	-0.0
1,527,098	-		MMJJ_RS08285	0.34	-0.2
1,527,170	+		MMJJ_RS08285	0.45	-0.2
1,527,190	-		MMJJ_RS08285	0.48	-0.5
1,527,190	-		MMJJ_RS08285	0.48	-0.1
1,527,191	+		MMJJ_RS08285	0.49	+0.5
1,527,200	-		MMJJ_RS08285	0.50	-0.6
1,527,200	-		MMJJ_RS08285	0.50	-0.8
1,527,201	+		MMJJ_RS08285	0.50	+0.3
1,527,201	+		MMJJ_RS08285	0.50	-0.2
1,527,205	+		MMJJ_RS08285	0.51	+0.3
1,527,226	-		MMJJ_RS08285	0.54	-0.3
1,527,226	-		MMJJ_RS08285	0.54	+0.5
1,527,227	+		MMJJ_RS08285	0.54	+0.4
1,527,227	+		MMJJ_RS08285	0.54	+0.5
1,527,227	+		MMJJ_RS08285	0.54	+0.5
1,527,227	+		MMJJ_RS08285	0.54	-0.2
1,527,259	-		MMJJ_RS08285	0.59	+0.5
1,527,283	-		MMJJ_RS08285	0.63	+0.3
1,527,289	-		MMJJ_RS08285	0.63	-0.4
1,527,289	-		MMJJ_RS08285	0.63	-0.3
1,527,290	+		MMJJ_RS08285	0.64	-0.3
1,527,300	-		MMJJ_RS08285	0.65	+0.2
1,527,300	-		MMJJ_RS08285	0.65	+0.2
1,527,301	+		MMJJ_RS08285	0.65	-0.0
1,527,301	+		MMJJ_RS08285	0.65	+0.4
1,527,389	+		MMJJ_RS08285	0.79	-0.0
1,527,390	-		MMJJ_RS08285	0.79	+0.6
1,527,391	+		MMJJ_RS08285	0.79	-0.1
1,527,446	-		MMJJ_RS08285	0.87	-0.8
1,527,446	-		MMJJ_RS08285	0.87	-0.5
1,527,528	-				-0.1
1,527,529	+				+1.2
1,527,529	-				+0.2
1,527,549	-				+0.2
1,527,570	+				-0.2
1,527,619	-				-0.7
1,527,619	-				+0.1
1,527,620	+				+0.2
1,527,620	+				+0.0
1,527,621	-				-1.1
1,527,621	-				-0.6
1,527,621	-				+0.4
1,527,622	+				+0.4
1,527,622	+				+0.6
1,527,622	+				-0.1
1,527,622	+				+0.8
1,527,622	+				+0.0
1,527,622	+				-0.4
1,527,622	+				+0.2
1,527,623	-				-0.0
1,527,624	+				-0.3
1,527,626	-				+0.1
1,527,627	+				+0.5
1,527,703	-				-1.4
1,527,775	+				-0.6
1,527,812	-				-0.1
1,527,827	-				+0.3
1,527,828	+				+0.3
1,527,831	-				+1.7
1,527,831	-				-0.0
1,527,832	+				-0.2
1,527,832	+				-0.4
1,527,832	+				+0.1
1,527,832	+				+0.3
1,527,832	+				+0.5
1,527,832	+				+0.0
1,527,832	+				-0.0
1,527,832	+				+0.8
1,527,943	+				+0.1
1,527,945	+				+0.2
1,527,945	+				+0.6
1,527,945	+				-0.8
1,528,038	-		MMJJ_RS08290	0.14	+0.5
1,528,038	-		MMJJ_RS08290	0.14	+0.2
1,528,038	-		MMJJ_RS08290	0.14	-0.1
1,528,039	+		MMJJ_RS08290	0.14	+0.6
1,528,041	-		MMJJ_RS08290	0.14	-0.1
1,528,041	-		MMJJ_RS08290	0.14	-0.1
1,528,075	-		MMJJ_RS08290	0.17	+0.5
1,528,075	-		MMJJ_RS08290	0.17	-0.0
1,528,075	-		MMJJ_RS08290	0.17	+0.0
1,528,075	-		MMJJ_RS08290	0.17	+0.3
1,528,076	+		MMJJ_RS08290	0.17	+0.9
1,528,076	+		MMJJ_RS08290	0.17	-0.1
1,528,076	+		MMJJ_RS08290	0.17	+0.4
1,528,077	-		MMJJ_RS08290	0.17	-0.1
1,528,080	-		MMJJ_RS08290	0.17	-0.0
1,528,080	-		MMJJ_RS08290	0.17	-0.3
1,528,081	+		MMJJ_RS08290	0.18	-0.5
1,528,081	+		MMJJ_RS08290	0.18	+0.6
1,528,085	+		MMJJ_RS08290	0.18	-0.3
1,528,138	+		MMJJ_RS08290	0.23	+0.4
1,528,159	+		MMJJ_RS08290	0.25	+0.2
1,528,224	+		MMJJ_RS08290	0.30	+0.1
1,528,286	-		MMJJ_RS08290	0.36	-0.5
1,528,307	-		MMJJ_RS08290	0.38	+0.2
1,528,308	+		MMJJ_RS08290	0.38	+0.3
1,528,319	+		MMJJ_RS08290	0.39	-0.1
1,528,337	+		MMJJ_RS08290	0.40	+0.5
1,528,362	-		MMJJ_RS08290	0.43	+0.6
1,528,362	-		MMJJ_RS08290	0.43	+0.1
1,528,362	-		MMJJ_RS08290	0.43	+0.4
1,528,367	+		MMJJ_RS08290	0.43	+0.2
1,528,376	+		MMJJ_RS08290	0.44	+0.1
1,528,410	+		MMJJ_RS08290	0.47	+1.0
1,528,433	+		MMJJ_RS08290	0.49	+0.2
1,528,443	+		MMJJ_RS08290	0.50	-0.1
1,528,503	+		MMJJ_RS08290	0.55	+0.1
1,528,537	+		MMJJ_RS08290	0.58	-0.2
1,528,545	+		MMJJ_RS08290	0.59	+0.2
1,528,547	-		MMJJ_RS08290	0.59	+0.3
1,528,547	-		MMJJ_RS08290	0.59	+0.0
1,528,547	-		MMJJ_RS08290	0.59	+0.1
1,528,547	-		MMJJ_RS08290	0.59	+0.1
1,528,548	+		MMJJ_RS08290	0.59	+0.5
1,528,548	+		MMJJ_RS08290	0.59	+0.2
1,528,588	-		MMJJ_RS08290	0.63	+0.6
1,528,588	-		MMJJ_RS08290	0.63	+0.2
1,528,588	-		MMJJ_RS08290	0.63	+0.6
1,528,588	-		MMJJ_RS08290	0.63	+0.2
1,528,588	-		MMJJ_RS08290	0.63	-0.1
1,528,589	+		MMJJ_RS08290	0.63	-0.1
1,528,602	-		MMJJ_RS08290	0.64	+0.2
1,528,602	-		MMJJ_RS08290	0.64	+0.0
1,528,602	-		MMJJ_RS08290	0.64	-0.3
1,528,603	+		MMJJ_RS08290	0.64	+0.3
1,528,603	+		MMJJ_RS08290	0.64	+0.4
1,528,603	+		MMJJ_RS08290	0.64	+0.1
1,528,603	+		MMJJ_RS08290	0.64	+0.9
1,528,603	+		MMJJ_RS08290	0.64	-0.3
1,528,603	+		MMJJ_RS08290	0.64	+1.0
1,528,603	+		MMJJ_RS08290	0.64	-0.3
1,528,608	+		MMJJ_RS08290	0.65	+0.2
1,528,613	-		MMJJ_RS08290	0.65	+0.1
1,528,613	-		MMJJ_RS08290	0.65	+0.2
1,528,616	-		MMJJ_RS08290	0.65	-0.2
1,528,628	-		MMJJ_RS08290	0.66	+0.9
1,528,635	+		MMJJ_RS08290	0.67	+0.5
1,528,635	+		MMJJ_RS08290	0.67	+0.2
1,528,635	+		MMJJ_RS08290	0.67	+0.4
1,528,635	+		MMJJ_RS08290	0.67	-0.2
1,528,691	-		MMJJ_RS08290	0.72	-0.2
1,528,696	-		MMJJ_RS08290	0.72	+0.7
1,528,696	-		MMJJ_RS08290	0.72	-0.1
1,528,751	+		MMJJ_RS08290	0.77	-0.3
1,528,751	+		MMJJ_RS08290	0.77	-0.1
1,528,775	-		MMJJ_RS08290	0.79	+0.3
1,528,776	+				-0.8
1,528,776	+		MMJJ_RS08290	0.80	+0.2
1,528,812	+		MMJJ_RS08290	0.83	-0.9
1,528,879	-		MMJJ_RS08290	0.89	-0.4
1,528,880	+		MMJJ_RS08290	0.89	+0.2
1,528,883	-		MMJJ_RS08290	0.89	+0.4
1,528,885	-		MMJJ_RS08290	0.89	-0.1
1,528,928	+				+0.8
1,528,979	-				+0.2
1,528,980	+				+0.5
1,529,009	+				-0.5
1,529,021	+				-0.2
1,529,023	-				+0.1
1,529,046	+				+0.3
1,529,051	-				-1.4
1,529,068	+				+0.1
1,529,069	-				+0.6
1,529,069	-				+0.5
1,529,070	+				+0.5
1,529,072	-				-0.2
1,529,072	-				+0.3
1,529,073	+				+0.1
1,529,073	+				+0.7
1,529,088	-				-0.3
1,529,163	+				-0.6
1,529,212	-				-0.8
1,529,212	-				+0.6
1,529,212	-				+0.1
1,529,213	+				-0.1
1,529,213	+				-0.1
1,529,233	-				+0.2
1,529,233	-				+0.6
1,529,233	-				+0.1
1,529,234	+				-0.1
1,529,263	-		MMJJ_RS08295	0.12	-0.0
1,529,263	-		MMJJ_RS08295	0.12	+0.4
1,529,263	-		MMJJ_RS08295	0.12	+0.1
1,529,264	+		MMJJ_RS08295	0.12	-0.3
1,529,266	-		MMJJ_RS08295	0.13	+0.3
1,529,266	-		MMJJ_RS08295	0.13	-0.1
1,529,267	+		MMJJ_RS08295	0.13	-0.2
1,529,267	+		MMJJ_RS08295	0.13	+0.1
1,529,267	+		MMJJ_RS08295	0.13	-0.4
1,529,279	-		MMJJ_RS08295	0.14	+0.1
1,529,279	-		MMJJ_RS08295	0.14	+0.0
1,529,279	-		MMJJ_RS08295	0.14	-0.5
1,529,279	-		MMJJ_RS08295	0.14	+0.1
1,529,279	-		MMJJ_RS08295	0.14	-0.5
1,529,280	+		MMJJ_RS08295	0.14	+0.2
1,529,280	+		MMJJ_RS08295	0.14	+0.3
1,529,282	-		MMJJ_RS08295	0.14	+0.0
1,529,282	-		MMJJ_RS08295	0.14	+0.4
1,529,307	+		MMJJ_RS08295	0.16	-0.1
1,529,307	+		MMJJ_RS08295	0.16	+0.8
1,529,314	+		MMJJ_RS08295	0.17	-0.0
1,529,318	-		MMJJ_RS08295	0.17	+0.2
1,529,318	-		MMJJ_RS08295	0.17	-0.1
1,529,319	+		MMJJ_RS08295	0.17	+0.4
1,529,321	-		MMJJ_RS08295	0.17	+0.1
1,529,321	-		MMJJ_RS08295	0.17	-0.1
1,529,321	-		MMJJ_RS08295	0.17	+0.2
1,529,322	+		MMJJ_RS08295	0.18	+0.3
1,529,327	-		MMJJ_RS08295	0.18	+0.4
1,529,327	-		MMJJ_RS08295	0.18	+0.1
1,529,328	+		MMJJ_RS08295	0.18	-0.4
1,529,378	-		MMJJ_RS08295	0.22	+0.9
1,529,378	-		MMJJ_RS08295	0.22	-0.1
1,529,378	-		MMJJ_RS08295	0.22	+0.1
1,529,381	-		MMJJ_RS08295	0.23	-0.2
1,529,382	+		MMJJ_RS08295	0.23	+0.3
1,529,399	-		MMJJ_RS08295	0.24	-1.5
1,529,420	-		MMJJ_RS08295	0.26	-0.6
1,529,421	+		MMJJ_RS08295	0.26	+0.0
1,529,549	-		MMJJ_RS08295	0.38	+0.1
1,529,553	-		MMJJ_RS08295	0.38	-0.7
1,529,602	-		MMJJ_RS08295	0.42	-0.4
1,529,606	-		MMJJ_RS08295	0.43	+0.2
1,529,606	-		MMJJ_RS08295	0.43	-0.9
1,529,606	-		MMJJ_RS08295	0.43	-0.2
1,529,606	-		MMJJ_RS08295	0.43	+0.3
1,529,606	-		MMJJ_RS08295	0.43	-0.4
1,529,606	-		MMJJ_RS08295	0.43	+0.1
1,529,650	-		MMJJ_RS08295	0.47	-1.0
1,529,729	+		MMJJ_RS08295	0.54	+0.4
1,529,769	-		MMJJ_RS08295	0.57	+0.2
1,529,769	-		MMJJ_RS08295	0.57	+0.2
1,529,770	+		MMJJ_RS08295	0.57	-0.3
1,529,770	+		MMJJ_RS08295	0.57	+0.4
1,529,781	+		MMJJ_RS08295	0.58	+0.8
1,529,786	+		MMJJ_RS08295	0.59	+0.2
1,529,788	-		MMJJ_RS08295	0.59	+0.3
1,529,789	+		MMJJ_RS08295	0.59	-0.2
1,529,791	-		MMJJ_RS08295	0.59	-0.5
1,529,791	-		MMJJ_RS08295	0.59	+0.3
1,529,792	+		MMJJ_RS08295	0.59	-0.3
1,529,792	+		MMJJ_RS08295	0.59	-0.0
1,529,792	+		MMJJ_RS08295	0.59	-0.8
1,529,792	+		MMJJ_RS08295	0.59	+0.1
1,529,792	+		MMJJ_RS08295	0.59	+0.2
1,529,807	-		MMJJ_RS08295	0.61	+0.4
1,529,833	+		MMJJ_RS08295	0.63	-0.3
1,529,833	+		MMJJ_RS08295	0.63	-0.2
1,529,846	-		MMJJ_RS08295	0.64	-0.3
1,529,846	-		MMJJ_RS08295	0.64	+0.3
1,529,846	-		MMJJ_RS08295	0.64	-0.8
1,529,846	-		MMJJ_RS08295	0.64	-0.1
1,529,846	-		MMJJ_RS08295	0.64	-0.0
1,529,846	-		MMJJ_RS08295	0.64	+0.5
1,529,846	-		MMJJ_RS08295	0.64	+0.2
1,529,847	+		MMJJ_RS08295	0.64	+0.5
1,529,847	+		MMJJ_RS08295	0.64	+0.3
1,529,847	+		MMJJ_RS08295	0.64	+0.4
1,529,850	-		MMJJ_RS08295	0.64	-0.1
1,529,851	+		MMJJ_RS08295	0.65	-0.0
1,529,854	-				+1.0
1,529,854	-		MMJJ_RS08295	0.65	+0.3
1,529,855	+		MMJJ_RS08295	0.65	-0.1
1,529,855	+		MMJJ_RS08295	0.65	-0.3
1,529,855	+		MMJJ_RS08295	0.65	-0.7
1,529,855	+		MMJJ_RS08295	0.65	-0.2
1,529,858	+		MMJJ_RS08295	0.65	+0.4
1,529,859	-		MMJJ_RS08295	0.65	+0.2
1,529,859	-		MMJJ_RS08295	0.65	+0.1
1,529,860	+		MMJJ_RS08295	0.65	+0.1
1,529,878	-		MMJJ_RS08295	0.67	+0.7
1,529,878	-		MMJJ_RS08295	0.67	+0.1
1,529,878	-		MMJJ_RS08295	0.67	+0.1
1,529,878	-		MMJJ_RS08295	0.67	+0.1
1,529,879	+		MMJJ_RS08295	0.67	-0.2
1,529,879	+		MMJJ_RS08295	0.67	-1.0
1,529,879	+		MMJJ_RS08295	0.67	-0.2
1,529,879	+		MMJJ_RS08295	0.67	-0.3
1,529,938	+		MMJJ_RS08295	0.72	+0.3
1,529,992	+		MMJJ_RS08295	0.77	+0.0
1,530,005	+		MMJJ_RS08295	0.78	-0.1