Strain Fitness in Methanococcus maripaludis JJ around MMJJ_RS05885

Experiment: Formate 100 mM hypophosphite

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate 100 mM hypophosphite
1,094,150	+		MMJJ_RS05880	0.78	+0.0
1,094,225	-		MMJJ_RS05880	0.80	+0.8
1,094,234	-		MMJJ_RS05880	0.81	-0.1
1,094,234	-		MMJJ_RS05880	0.81	+0.6
1,094,234	-		MMJJ_RS05880	0.81	-0.7
1,094,234	-		MMJJ_RS05880	0.81	+1.7
1,094,234	-		MMJJ_RS05880	0.81	-0.0
1,094,237	+		MMJJ_RS05880	0.81	+0.1
1,094,333	-		MMJJ_RS05880	0.84	+0.9
1,094,411	-		MMJJ_RS05880	0.86	+1.3
1,094,412	+		MMJJ_RS05880	0.86	+0.3
1,094,426	-		MMJJ_RS05880	0.87	+0.2
1,094,426	-		MMJJ_RS05880	0.87	+0.7
1,094,428	-		MMJJ_RS05880	0.87	+0.5
1,094,429	+		MMJJ_RS05880	0.87	+0.3
1,094,502	+		MMJJ_RS05880	0.89	+0.2
1,094,552	+				+1.4
1,094,554	-				+0.4
1,094,575	+				-0.7
1,094,575	+				+0.5
1,094,575	+				+0.2
1,094,577	-				+0.4
1,094,577	-				-0.5
1,094,577	-				+0.1
1,094,578	+				+0.1
1,094,578	+				+0.5
1,094,581	-				+0.9
1,094,592	+				+0.5
1,094,626	-				+0.3
1,094,645	-				+0.3
1,094,680	-				-0.6
1,094,692	-				+0.9
1,094,710	-				-0.1
1,094,710	-				-0.1
1,094,779	-				-0.3
1,094,779	-				-0.3
1,094,779	-				+1.3
1,094,779	-				+0.8
1,094,782	-				+0.2
1,094,783	+				-0.4
1,094,783	+				+0.3
1,094,783	+				+0.3
1,094,784	-				-1.1
1,094,784	-				+0.4
1,094,784	-				+0.2
1,094,784	-				+0.3
1,094,784	-				+0.7
1,094,784	-				-0.1
1,094,785	+				+0.4
1,094,785	+				+0.2
1,094,785	+				-0.5
1,094,815	-				+0.6
1,094,816	+				+0.6
1,094,827	-				+0.8
1,094,827	-				+0.8
1,094,827	-				+0.7
1,094,828	+				+0.5
1,094,829	-				-0.1
1,094,829	-				-0.4
1,094,830	+				-0.0
1,094,830	+				-0.4
1,094,830	+				-0.5
1,094,830	+				-0.4
1,094,830	+				+0.4
1,094,830	+				+0.7
1,094,870	-				-0.2
1,094,878	-				-0.1
1,094,879	+				+0.2
1,094,891	+				-0.1
1,094,893	-				+0.1
1,094,894	+				-0.3
1,094,894	+				+0.1
1,094,908	-				-1.5
1,094,908	-				+0.8
1,094,912	-				+0.3
1,094,912	-				+0.4
1,094,912	-				-0.5
1,094,912	-				+0.3
1,094,912	-				-0.1
1,094,912	-				+2.2
1,094,912	-				+0.1
1,094,912	-				-2.3
1,094,912	-				-0.2
1,094,912	-				+0.2
1,094,912	-				+0.6
1,094,912	-				+0.5
1,094,912	-				-0.4
1,094,913	+				+0.5
1,094,913	+				-0.1
1,094,913	+				-1.0
1,094,913	+				+0.2
1,094,913	+				+0.6
1,094,913	+				-0.1
1,094,913	+				+0.2
1,094,913	+				-0.4
1,094,913	+				+1.2
1,094,913	+				-0.2
1,094,913	+				+0.2
1,094,913	+				+0.8
1,094,913	+				+1.1
1,094,914	-				+0.3
1,094,915	+				-0.1
1,094,952	+				+0.4
1,095,005	-				-0.3
1,095,006	+				+0.1
1,095,057	+				+1.5
1,095,071	+				-0.3
1,095,082	-				-0.0
1,095,095	+				+0.4
1,095,098	-				+0.2
1,095,108	+				-0.1
1,095,115	-				+0.2
1,095,115	-				+0.1
1,095,115	-				-0.7
1,095,115	-				+0.3
1,095,115	-				+1.3
1,095,116	+				-0.4
1,095,116	+				-0.4
1,095,116	+				-0.9
1,095,116	+				-0.1
1,095,116	+				+2.3
1,095,116	+				+0.3
1,095,116	+				+0.7
1,095,116	+				+1.5
1,095,116	+				+0.1
1,095,116	+				+0.9
1,095,121	+				+0.0
1,095,134	+				-0.2
1,095,216	-				-0.9
1,095,216	-				-1.7
1,095,216	-				-1.1
1,095,311	-		MMJJ_RS05885	0.16	-0.9
1,095,311	-		MMJJ_RS05885	0.16	-1.5
1,095,312	+		MMJJ_RS05885	0.16	-1.3
1,095,321	-		MMJJ_RS05885	0.17	-0.8
1,095,321	-		MMJJ_RS05885	0.17	-1.6
1,095,322	+		MMJJ_RS05885	0.17	-1.2
1,095,322	+		MMJJ_RS05885	0.17	-2.5
1,095,324	+		MMJJ_RS05885	0.17	-2.0
1,095,335	-		MMJJ_RS05885	0.18	-0.1
1,095,336	+		MMJJ_RS05885	0.18	-1.1
1,095,337	-		MMJJ_RS05885	0.18	-0.6
1,095,338	+		MMJJ_RS05885	0.18	-0.1
1,095,338	+		MMJJ_RS05885	0.18	+1.8
1,095,338	+		MMJJ_RS05885	0.18	-0.7
1,095,338	+		MMJJ_RS05885	0.18	-1.5
1,095,340	-		MMJJ_RS05885	0.18	-1.2
1,095,340	-		MMJJ_RS05885	0.18	-0.5
1,095,341	+		MMJJ_RS05885	0.18	-1.8
1,095,345	-		MMJJ_RS05885	0.19	-1.9
1,095,346	+		MMJJ_RS05885	0.19	-2.5
1,095,346	+		MMJJ_RS05885	0.19	-0.5
1,095,393	-		MMJJ_RS05885	0.23	-1.8
1,095,406	-		MMJJ_RS05885	0.25	-0.8
1,095,437	-		MMJJ_RS05885	0.28	+0.2
1,095,445	+		MMJJ_RS05885	0.28	-0.7
1,095,447	-		MMJJ_RS05885	0.29	-0.3
1,095,451	-		MMJJ_RS05885	0.29	-0.9
1,095,452	+		MMJJ_RS05885	0.29	-2.0
1,095,452	+		MMJJ_RS05885	0.29	-0.5
1,095,452	+		MMJJ_RS05885	0.29	-0.5
1,095,452	+		MMJJ_RS05885	0.29	-1.5
1,095,471	+		MMJJ_RS05885	0.31	-1.0
1,095,471	+		MMJJ_RS05885	0.31	-2.5
1,095,471	+		MMJJ_RS05885	0.31	-1.1
1,095,471	+		MMJJ_RS05885	0.31	+0.3
1,095,482	-		MMJJ_RS05885	0.32	-0.6
1,095,483	+		MMJJ_RS05885	0.32	+0.5
1,095,486	-		MMJJ_RS05885	0.32	-0.9
1,095,486	-		MMJJ_RS05885	0.32	-1.1
1,095,486	-		MMJJ_RS05885	0.32	-3.2
1,095,519	+				+0.2
1,095,519	+		MMJJ_RS05885	0.36	-1.4
1,095,539	-		MMJJ_RS05885	0.37	-0.9
1,095,540	+		MMJJ_RS05885	0.38	-1.4
1,095,550	-		MMJJ_RS05885	0.39	-1.2
1,095,551	+		MMJJ_RS05885	0.39	-0.8
1,095,651	-		MMJJ_RS05885	0.48	-3.2
1,095,651	-		MMJJ_RS05885	0.48	+1.1
1,095,689	-		MMJJ_RS05885	0.52	-1.5
1,095,690	+		MMJJ_RS05885	0.52	-0.8
1,095,699	-		MMJJ_RS05885	0.53	-2.2
1,095,699	-		MMJJ_RS05885	0.53	-1.5
1,095,699	-		MMJJ_RS05885	0.53	-2.4
1,095,700	+		MMJJ_RS05885	0.53	-0.1
1,095,712	-		MMJJ_RS05885	0.54	-1.6
1,095,749	-		MMJJ_RS05885	0.58	-0.5
1,095,749	-		MMJJ_RS05885	0.58	+0.6
1,095,749	-		MMJJ_RS05885	0.58	+1.6
1,095,749	-		MMJJ_RS05885	0.58	-0.8
1,095,750	+		MMJJ_RS05885	0.58	-0.7
1,095,750	+		MMJJ_RS05885	0.58	-0.4
1,095,750	+		MMJJ_RS05885	0.58	-1.7
1,095,750	+		MMJJ_RS05885	0.58	-0.9
1,095,750	+		MMJJ_RS05885	0.58	+0.2
1,095,750	+		MMJJ_RS05885	0.58	-1.1
1,095,750	+		MMJJ_RS05885	0.58	-0.7
1,095,750	+		MMJJ_RS05885	0.58	-2.2
1,095,750	+		MMJJ_RS05885	0.58	-0.7
1,095,754	-		MMJJ_RS05885	0.58	-0.7
1,095,754	-		MMJJ_RS05885	0.58	-1.6
1,095,755	+		MMJJ_RS05885	0.58	-0.4
1,095,759	-		MMJJ_RS05885	0.59	-0.6
1,095,759	-		MMJJ_RS05885	0.59	-1.1
1,095,760	+		MMJJ_RS05885	0.59	-1.2
1,095,796	+		MMJJ_RS05885	0.62	-0.5
1,095,796	+		MMJJ_RS05885	0.62	-2.4
1,095,817	+		MMJJ_RS05885	0.64	-0.5
1,095,817	+		MMJJ_RS05885	0.64	-1.1
1,095,825	-		MMJJ_RS05885	0.65	-0.9
1,095,825	-		MMJJ_RS05885	0.65	-0.7
1,095,826	+		MMJJ_RS05885	0.65	-1.8
1,095,826	+		MMJJ_RS05885	0.65	-1.7
1,095,826	+		MMJJ_RS05885	0.65	-2.1
1,095,848	-		MMJJ_RS05885	0.67	+0.7
1,095,849	+		MMJJ_RS05885	0.67	-0.6
1,095,849	+		MMJJ_RS05885	0.67	-0.4
1,095,854	-		MMJJ_RS05885	0.68	-1.6
1,095,854	-		MMJJ_RS05885	0.68	-1.3
1,095,855	+		MMJJ_RS05885	0.68	-1.8
1,095,855	+		MMJJ_RS05885	0.68	-0.5
1,095,855	+		MMJJ_RS05885	0.68	+0.0
1,095,859	+		MMJJ_RS05885	0.68	-1.6
1,095,859	+		MMJJ_RS05885	0.68	-0.0
1,095,859	+		MMJJ_RS05885	0.68	-0.9
1,095,859	+		MMJJ_RS05885	0.68	-1.5
1,095,859	+		MMJJ_RS05885	0.68	+0.9
1,095,859	+		MMJJ_RS05885	0.68	+1.4
1,095,859	+		MMJJ_RS05885	0.68	-1.2
1,095,862	-		MMJJ_RS05885	0.68	-1.4
1,095,863	+		MMJJ_RS05885	0.69	-1.2
1,095,863	+		MMJJ_RS05885	0.69	-0.2
1,095,866	-		MMJJ_RS05885	0.69	-3.6
1,095,866	-		MMJJ_RS05885	0.69	-1.9
1,095,867	+		MMJJ_RS05885	0.69	-0.6
1,095,899	-		MMJJ_RS05885	0.72	+0.6
1,095,899	-		MMJJ_RS05885	0.72	-0.3
1,095,900	+		MMJJ_RS05885	0.72	+0.2
1,095,900	+		MMJJ_RS05885	0.72	-0.9
1,095,970	+		MMJJ_RS05885	0.79	-1.0
1,095,975	-		MMJJ_RS05885	0.79	-0.7
1,095,989	+		MMJJ_RS05885	0.81	-0.6
1,096,029	-		MMJJ_RS05885	0.85	-1.5
1,096,030	+		MMJJ_RS05885	0.85	-1.1
1,096,050	+		MMJJ_RS05885	0.87	-0.9
1,096,083	-		MMJJ_RS05885	0.90	-0.9
1,096,084	+		MMJJ_RS05885	0.90	-0.4
1,096,165	+				+1.0
1,096,173	-				+0.6
1,096,232	-				+0.3
1,096,233	+				+0.8
1,096,233	+				-0.6
1,096,282	-				+0.8
1,096,285	-				-1.9
1,096,292	+				-0.7
1,096,310	+				+0.4
1,096,335	+		MMJJ_RS05890	0.12	-0.1
1,096,369	-		MMJJ_RS05890	0.16	-0.2
1,096,370	+		MMJJ_RS05890	0.16	-0.9
1,096,371	-		MMJJ_RS05890	0.16	+0.6
1,096,372	+		MMJJ_RS05890	0.16	+0.3
1,096,380	+		MMJJ_RS05890	0.17	-0.5
1,096,393	-		MMJJ_RS05890	0.19	-0.9
1,096,394	+		MMJJ_RS05890	0.19	+0.0
1,096,394	+		MMJJ_RS05890	0.19	+0.1
1,096,394	+		MMJJ_RS05890	0.19	-0.2
1,096,421	-		MMJJ_RS05890	0.22	-0.0
1,096,421	-		MMJJ_RS05890	0.22	-0.9
1,096,421	-		MMJJ_RS05890	0.22	-0.4
1,096,421	-		MMJJ_RS05890	0.22	-0.5
1,096,422	+		MMJJ_RS05890	0.22	-0.4
1,096,432	-		MMJJ_RS05890	0.24	-0.0
1,096,432	-		MMJJ_RS05890	0.24	-0.3
1,096,498	-		MMJJ_RS05890	0.31	-0.4
1,096,551	-		MMJJ_RS05890	0.38	+0.0
1,096,557	-		MMJJ_RS05890	0.38	-0.1
1,096,558	+		MMJJ_RS05890	0.39	+0.3
1,096,560	+		MMJJ_RS05890	0.39	-0.3
1,096,584	-		MMJJ_RS05890	0.42	+0.8
1,096,589	+		MMJJ_RS05890	0.42	+0.7
1,096,589	+		MMJJ_RS05890	0.42	+0.2
1,096,592	+		MMJJ_RS05890	0.43	+0.1
1,096,696	-		MMJJ_RS05890	0.55	-0.6
1,096,696	-		MMJJ_RS05890	0.55	+0.4
1,096,697	+		MMJJ_RS05890	0.55	-0.5
1,096,697	+		MMJJ_RS05890	0.55	+0.3
1,096,754	+		MMJJ_RS05890	0.62	-0.1
1,096,754	+		MMJJ_RS05890	0.62	-0.0
1,096,754	+		MMJJ_RS05890	0.62	-0.1
1,096,754	+		MMJJ_RS05890	0.62	-0.0
1,096,771	-		MMJJ_RS05890	0.64	+0.1
1,096,772	+		MMJJ_RS05890	0.64	+0.7
1,096,772	+		MMJJ_RS05890	0.64	+0.2
1,096,784	+		MMJJ_RS05890	0.65	+0.5
1,096,812	+		MMJJ_RS05890	0.69	-0.2
1,096,812	+		MMJJ_RS05890	0.69	-0.5
1,096,816	-		MMJJ_RS05890	0.69	+1.2
1,096,816	-		MMJJ_RS05890	0.69	-0.2
1,096,817	+		MMJJ_RS05890	0.69	+0.0
1,096,828	-		MMJJ_RS05890	0.71	-0.3
1,096,828	-		MMJJ_RS05890	0.71	-0.2
1,096,828	-		MMJJ_RS05890	0.71	+0.3
1,096,831	-		MMJJ_RS05890	0.71	-0.2
1,096,831	-		MMJJ_RS05890	0.71	-0.5
1,096,832	+		MMJJ_RS05890	0.71	-1.3
1,096,832	+		MMJJ_RS05890	0.71	-0.9
1,096,832	+		MMJJ_RS05890	0.71	+0.3
1,096,832	+		MMJJ_RS05890	0.71	+0.1
1,096,833	-		MMJJ_RS05890	0.71	-0.5
1,096,833	-		MMJJ_RS05890	0.71	-0.2
1,096,833	-		MMJJ_RS05890	0.71	+0.2
1,096,834	+		MMJJ_RS05890	0.71	+1.1
1,096,834	+		MMJJ_RS05890	0.71	+1.1
1,096,862	-		MMJJ_RS05890	0.75	-0.1
1,096,863	+		MMJJ_RS05890	0.75	-0.2
1,096,863	+		MMJJ_RS05890	0.75	-0.6
1,096,863	+		MMJJ_RS05890	0.75	+0.2
1,096,864	-		MMJJ_RS05890	0.75	-0.0
1,096,865	+		MMJJ_RS05890	0.75	+0.2
1,096,883	-		MMJJ_RS05890	0.77	+0.1
1,096,883	-		MMJJ_RS05890	0.77	+0.2
1,096,884	+		MMJJ_RS05890	0.77	-0.5
1,096,884	+		MMJJ_RS05890	0.77	-0.1
1,096,884	+		MMJJ_RS05890	0.77	-0.5
1,096,913	+		MMJJ_RS05890	0.81	+0.3
1,096,924	-		MMJJ_RS05890	0.82	-0.4
1,096,924	-		MMJJ_RS05890	0.82	-0.0
1,096,945	-		MMJJ_RS05890	0.84	+0.7
1,096,945	-		MMJJ_RS05890	0.84	-0.3
1,096,968	+		MMJJ_RS05890	0.87	+0.2
1,097,013	-				-0.2
1,097,014	+				+0.1
1,097,014	+				+0.4
1,097,014	+				+0.7
1,097,017	-				+0.5
1,097,017	-				+0.1
1,097,018	+				-0.8
1,097,061	+				-0.2
1,097,078	+				-0.3
1,097,125	+				+0.6
1,097,150	+		MMJJ_RS05895	0.11	-0.3
1,097,155	+		MMJJ_RS05895	0.11	-0.2