Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS02720

Experiment: D-Glucose 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 5 mg/ml (C)
117,271	-		HMPREF1058_RS02725	0.48	-0.6
117,275	+		HMPREF1058_RS02725	0.48	-0.9
117,276	-		HMPREF1058_RS02725	0.48	-0.8
117,280	-		HMPREF1058_RS02725	0.48	+0.5
117,281	+		HMPREF1058_RS02725	0.48	-1.6
117,281	+		HMPREF1058_RS02725	0.48	-0.6
117,342	+		HMPREF1058_RS02725	0.52	+0.1
117,425	+		HMPREF1058_RS02725	0.57	+2.1
117,425	+		HMPREF1058_RS02725	0.57	-1.0
117,590	-		HMPREF1058_RS02725	0.67	+0.1
117,731	-		HMPREF1058_RS02725	0.76	-2.4
117,731	-		HMPREF1058_RS02725	0.76	+1.7
117,827	+		HMPREF1058_RS02725	0.82	-0.1
117,833	+		HMPREF1058_RS02725	0.83	+0.3
117,852	+		HMPREF1058_RS02725	0.84	-1.3
117,963	-				-0.4
118,081	-				+0.2
118,083	-				-0.5
118,096	+				-1.7
118,209	+				-0.6
118,221	+				+0.9
118,248	-				+1.8
118,398	-		HMPREF1058_RS02720	0.27	+1.4
118,488	+		HMPREF1058_RS02720	0.41	+0.7
118,488	+		HMPREF1058_RS02720	0.41	+0.8
118,489	-		HMPREF1058_RS02720	0.41	-0.8
118,519	-		HMPREF1058_RS02720	0.46	-1.3
118,622	+		HMPREF1058_RS02720	0.63	+0.9
118,622	+		HMPREF1058_RS02720	0.63	+1.1
118,622	+		HMPREF1058_RS02720	0.63	+0.7
118,623	-		HMPREF1058_RS02720	0.63	+0.3
118,624	+		HMPREF1058_RS02720	0.63	-0.3
118,624	+		HMPREF1058_RS02720	0.63	+3.7
118,625	-		HMPREF1058_RS02720	0.64	-0.3
118,744	-		HMPREF1058_RS02720	0.83	-1.7
118,839	+				-0.1
118,852	+				+0.1
118,852	+				-0.7
118,859	+				+0.0
118,859	+				+0.6
118,888	+				+2.9
119,127	-		HMPREF1058_RS02715	0.35	-0.7
119,145	-		HMPREF1058_RS02715	0.38	-0.7
119,146	+		HMPREF1058_RS02715	0.38	+0.3
119,146	+		HMPREF1058_RS02715	0.38	-1.1
119,147	-		HMPREF1058_RS02715	0.38	-0.4
119,147	-		HMPREF1058_RS02715	0.38	+0.7
119,166	-		HMPREF1058_RS02715	0.40	+0.7
119,172	-		HMPREF1058_RS02715	0.41	+0.2
119,191	+		HMPREF1058_RS02715	0.44	-0.0
119,199	+		HMPREF1058_RS02715	0.45	-0.2
119,199	+		HMPREF1058_RS02715	0.45	+0.0
119,201	+		HMPREF1058_RS02715	0.45	-0.4
119,303	+		HMPREF1058_RS02715	0.59	+1.3
119,349	-		HMPREF1058_RS02715	0.65	-0.8
119,350	+		HMPREF1058_RS02715	0.65	-0.5
119,414	+		HMPREF1058_RS02715	0.73	+0.0
119,415	-		HMPREF1058_RS02715	0.73	-0.2
119,419	+		HMPREF1058_RS02715	0.74	+0.1
119,449	+		HMPREF1058_RS02715	0.78	-0.6
119,450	-		HMPREF1058_RS02715	0.78	+0.0
119,544	-				-0.2
119,547	-				+0.1
119,549	+				-0.7
119,561	+				+0.5
119,562	-				-0.7
119,620	+				-0.6
119,634	+				+0.7
119,795	-				+0.6
119,796	+				+1.6
119,819	-				+0.4
119,819	-				+1.0
119,843	+				-1.2