Strain Fitness in Phocaeicola vulgatus CL09T03C04 around HMPREF1058_RS01850

Experiment: D-Glucose 5 mg/ml (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose 5 mg/ml (C)
29,504	+		HMPREF1058_RS01860	0.34	+0.0
29,504	+		HMPREF1058_RS01860	0.34	-1.7
29,505	-		HMPREF1058_RS01860	0.34	+0.3
29,505	-		HMPREF1058_RS01860	0.34	-1.1
29,583	-		HMPREF1058_RS01860	0.41	-0.8
29,753	-		HMPREF1058_RS01860	0.58	+1.1
29,851	+		HMPREF1058_RS01860	0.68	+1.5
29,851	+		HMPREF1058_RS01860	0.68	-0.7
29,851	+		HMPREF1058_RS01860	0.68	+1.5
29,918	-		HMPREF1058_RS01860	0.74	+0.3
29,976	-		HMPREF1058_RS01860	0.80	+0.7
30,035	-		HMPREF1058_RS01860	0.85	-0.9
30,048	+		HMPREF1058_RS01860	0.87	+0.4
30,055	-		HMPREF1058_RS01860	0.87	-1.6
30,095	+				+0.5
30,284	+		HMPREF1058_RS01855	0.28	-2.1
30,285	-				-0.7
30,300	-		HMPREF1058_RS01855	0.33	+0.6
30,309	+		HMPREF1058_RS01855	0.36	+2.3
30,452	+		HMPREF1058_RS01855	0.85	-0.6
30,453	-		HMPREF1058_RS01855	0.85	-0.3
30,488	-				+0.4
30,490	-				+0.5
30,494	+				+0.9
30,494	+				+0.1
30,495	-				-0.8
30,540	-		HMPREF1058_RS01850	0.15	+0.9
30,566	-		HMPREF1058_RS01850	0.21	+0.9
30,617	+		HMPREF1058_RS01850	0.33	-1.6
30,617	+		HMPREF1058_RS01850	0.33	+0.8
30,666	-		HMPREF1058_RS01850	0.45	+0.3
30,666	-		HMPREF1058_RS01850	0.45	+1.8
30,733	-		HMPREF1058_RS01850	0.61	-0.0
30,733	-				-1.6
30,733	-		HMPREF1058_RS01850	0.61	-0.6
30,742	-		HMPREF1058_RS01850	0.63	+1.0
30,795	+		HMPREF1058_RS01850	0.76	+0.2
30,797	+		HMPREF1058_RS01850	0.76	+0.3
30,849	+		HMPREF1058_RS01850	0.89	+1.0
30,885	+				-0.8
30,885	+				+1.8
30,928	-				+0.6