Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3974

Experiment: Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.1 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Varel_Bryant_medium_Glucose with Dimethyl Sulfoxide 0.1 vol%
5,173,960	+		BT3973	0.61	-3.2
5,174,050	+		BT3973	0.68	-0.7
5,174,357	-				-3.2
5,174,725	-				-1.6
5,174,747	+				-1.5
5,174,811	+				-0.8
5,174,870	-				-1.0
5,174,873	-				+0.1
5,174,897	+				+0.1
5,174,966	-				+0.1
5,174,968	+				-1.0
5,175,017	-		BT3974	0.11	+1.6
5,175,021	+		BT3974	0.11	+1.1
5,175,121	+		BT3974	0.24	-0.0
5,175,122	-		BT3974	0.24	+1.0
5,175,200	-		BT3974	0.34	+0.3
5,175,277	+		BT3974	0.43	-0.1
5,175,296	-		BT3974	0.46	-0.0
5,175,297	+		BT3974	0.46	-0.6
5,175,297	+		BT3974	0.46	+0.6
5,175,297	+		BT3974	0.46	-0.6
5,175,297	+		BT3974	0.46	-0.0
5,175,298	-		BT3974	0.46	-2.9
5,175,299	+		BT3974	0.46	+1.5
5,175,300	-		BT3974	0.46	-2.6
5,175,333	-		BT3974	0.50	+2.0
5,175,336	+		BT3974	0.51	-1.4
5,175,404	-		BT3974	0.59	+0.3
5,175,438	+		BT3974	0.64	+0.4
5,175,461	-		BT3974	0.66	+0.5
5,175,485	-		BT3974	0.69	-0.2
5,175,485	-		BT3974	0.69	+0.5
5,175,562	-		BT3974	0.79	-2.4
5,175,573	+		BT3974	0.81	+0.3
5,175,573	+		BT3974	0.81	+2.4
5,175,613	+		BT3974	0.86	+0.6
5,175,614	-		BT3974	0.86	+2.1
5,175,715	+				+1.5
5,175,716	-				-2.6
5,175,731	-				-0.5
5,175,831	+				-0.6
5,175,831	+				+0.8
5,175,863	-				-0.9