Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS23100

Experiment: Pimelic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C)
1,541,537	+				-0.5
1,541,538	-				+0.0
1,541,538	-				+0.3
1,541,656	+				+1.1
1,541,656	+				-0.0
1,541,657	-				+0.2
1,541,657	-				-0.3
1,541,690	+				+0.3
1,541,690	+				-0.5
1,541,691	-				-1.0
1,541,691	-				-0.2
1,541,691	-				-0.5
1,541,691	-				+0.2
1,541,691	-				-1.1
1,541,691	-				+0.1
1,541,712	+				+0.1
1,541,712	+				+0.0
1,541,712	+				-1.1
1,541,712	+				+1.0
1,541,712	+				-0.1
1,541,713	-				-0.8
1,541,713	-				+0.4
1,541,713	-				+0.1
1,541,713	-				+0.2
1,541,713	-				-1.0
1,541,713	-				+0.1
1,541,713	-				-0.9
1,541,713	-				+0.8
1,541,713	-				-0.1
1,541,713	-				-0.4
1,541,713	-				+0.3
1,541,813	+		ABZR87_RS23095	0.16	-1.8
1,542,251	+				-0.7
1,542,275	+				+0.6
1,542,299	-				-0.5
1,542,299	-				-0.7
1,542,299	-				+0.3
1,542,299	-				+0.4
1,542,473	-				+0.2
1,542,530	+				+0.3
1,542,530	+				-0.2
1,542,530	+				-0.2
1,542,531	-				+0.0
1,542,531	-				+0.9
1,542,773	+		ABZR87_RS23100	0.12	-0.7
1,542,774	-		ABZR87_RS23100	0.12	+0.4
1,542,989	-		ABZR87_RS23100	0.19	-0.3
1,543,142	+		ABZR87_RS23100	0.24	-0.3
1,543,280	+		ABZR87_RS23100	0.28	-0.2
1,543,280	+		ABZR87_RS23100	0.28	+0.3
1,543,280	+		ABZR87_RS23100	0.28	-0.1
1,543,280	+		ABZR87_RS23100	0.28	-0.3
1,543,280	+		ABZR87_RS23100	0.28	-0.8
1,543,280	+		ABZR87_RS23100	0.28	-0.3
1,543,280	+		ABZR87_RS23100	0.28	-0.1
1,543,280	+		ABZR87_RS23100	0.28	-0.3
1,543,281	-		ABZR87_RS23100	0.28	-0.4
1,543,281	-		ABZR87_RS23100	0.28	-0.8
1,543,281	-		ABZR87_RS23100	0.28	+0.5
1,543,281	-		ABZR87_RS23100	0.28	-0.8
1,543,751	+		ABZR87_RS23100	0.43	-0.9
1,543,751	+		ABZR87_RS23100	0.43	-0.0
1,543,802	+		ABZR87_RS23100	0.44	-0.6
1,543,802	+		ABZR87_RS23100	0.44	-0.2
1,543,802	+		ABZR87_RS23100	0.44	+0.2
1,543,802	+		ABZR87_RS23100	0.44	+1.7
1,543,803	-		ABZR87_RS23100	0.44	-0.7
1,543,803	-		ABZR87_RS23100	0.44	+0.3
1,543,803	-		ABZR87_RS23100	0.44	+1.1
1,543,803	-		ABZR87_RS23100	0.44	-0.2
1,543,803	-		ABZR87_RS23100	0.44	+0.0
1,543,803	-		ABZR87_RS23100	0.44	+0.2
1,543,803	-		ABZR87_RS23100	0.44	+0.2
1,543,910	+		ABZR87_RS23100	0.48	+1.1
1,543,911	-		ABZR87_RS23100	0.48	-0.5
1,543,952	+		ABZR87_RS23100	0.49	+0.3
1,543,952	+		ABZR87_RS23100	0.49	-1.4
1,543,952	+		ABZR87_RS23100	0.49	-0.8
1,543,952	+		ABZR87_RS23100	0.49	-1.4
1,543,953	-		ABZR87_RS23100	0.49	-0.9
1,543,953	-		ABZR87_RS23100	0.49	+0.2
1,543,953	-		ABZR87_RS23100	0.49	-0.3
1,543,983	-		ABZR87_RS23100	0.50	-0.2
1,544,039	+		ABZR87_RS23100	0.52	-0.0
1,544,039	+		ABZR87_RS23100	0.52	+0.4
1,544,040	-		ABZR87_RS23100	0.52	-1.5
1,544,040	-		ABZR87_RS23100	0.52	+0.0
1,544,040	-		ABZR87_RS23100	0.52	+0.7
1,544,040	-		ABZR87_RS23100	0.52	-0.4
1,544,330	+		ABZR87_RS23100	0.61	-2.2
1,544,330	+		ABZR87_RS23100	0.61	-0.0
1,544,330	+		ABZR87_RS23100	0.61	-0.8
1,544,331	-		ABZR87_RS23100	0.61	+0.5
1,544,537	-		ABZR87_RS23100	0.67	-0.0
1,544,711	+		ABZR87_RS23100	0.73	-0.5
1,544,711	+		ABZR87_RS23100	0.73	+0.0
1,544,712	-		ABZR87_RS23100	0.73	-0.2
1,544,712	-		ABZR87_RS23100	0.73	-0.9
1,544,871	+		ABZR87_RS23100	0.78	-1.3
1,544,879	+		ABZR87_RS23100	0.78	-1.1
1,544,906	+		ABZR87_RS23100	0.79	-0.5
1,544,906	+		ABZR87_RS23100	0.79	-0.6
1,544,907	-		ABZR87_RS23100	0.79	+0.3
1,544,907	-		ABZR87_RS23100	0.79	+0.1
1,545,004	+		ABZR87_RS23100	0.82	-0.1
1,545,004	+		ABZR87_RS23100	0.82	+0.4
1,545,087	-		ABZR87_RS23100	0.84	+0.4
1,545,087	-		ABZR87_RS23100	0.84	+0.1
1,545,550	+				+0.5
1,545,550	+				+0.0
1,545,550	+				-0.3
1,545,551	-				+0.4
1,545,551	-				+0.0
1,545,774	+		ABZR87_RS23105	0.15	-2.2
1,545,775	-		ABZR87_RS23105	0.15	-0.4
1,545,775	-		ABZR87_RS23105	0.15	+0.4
1,545,777	+		ABZR87_RS23105	0.15	+0.1
1,545,825	+		ABZR87_RS23105	0.19	-0.3
1,545,826	-		ABZR87_RS23105	0.19	+1.1
1,545,897	+		ABZR87_RS23105	0.24	+0.0
1,545,915	+		ABZR87_RS23105	0.26	-0.8
1,545,915	+		ABZR87_RS23105	0.26	-0.0
1,545,915	+		ABZR87_RS23105	0.26	+0.5
1,545,915	+		ABZR87_RS23105	0.26	+0.1
1,545,915	+		ABZR87_RS23105	0.26	-0.0
1,545,916	-		ABZR87_RS23105	0.26	+0.2
1,545,916	-		ABZR87_RS23105	0.26	-2.2
1,545,916	-		ABZR87_RS23105	0.26	+1.3
1,545,916	-		ABZR87_RS23105	0.26	+0.2
1,545,934	-		ABZR87_RS23105	0.27	+0.0
1,545,934	-		ABZR87_RS23105	0.27	+1.5
1,546,362	+		ABZR87_RS23105	0.60	+0.4
1,546,362	+		ABZR87_RS23105	0.60	+0.2
1,546,362	+		ABZR87_RS23105	0.60	+0.0
1,546,362	+		ABZR87_RS23105	0.60	+0.4
1,546,362	+		ABZR87_RS23105	0.60	+1.0
1,546,363	-		ABZR87_RS23105	0.60	+0.3
1,546,363	-		ABZR87_RS23105	0.60	-0.9
1,546,368	+		ABZR87_RS23105	0.60	-1.2
1,546,368	+		ABZR87_RS23105	0.60	-0.5
1,546,368	+		ABZR87_RS23105	0.60	-0.2
1,546,368	+		ABZR87_RS23105	0.60	+1.5
1,546,369	-		ABZR87_RS23105	0.60	-0.1
1,546,369	-		ABZR87_RS23105	0.60	-0.2
1,546,369	-		ABZR87_RS23105	0.60	+0.5
1,546,369	-		ABZR87_RS23105	0.60	-1.2
1,546,384	-		ABZR87_RS23105	0.62	-0.5
1,546,384	-		ABZR87_RS23105	0.62	-0.4
1,546,557	+		ABZR87_RS23105	0.75	+0.0
1,546,557	+		ABZR87_RS23105	0.75	-0.9
1,546,557	+		ABZR87_RS23105	0.75	+0.5
1,546,558	-		ABZR87_RS23105	0.75	+0.1
1,546,558	-		ABZR87_RS23105	0.75	+0.2
1,546,558	-		ABZR87_RS23105	0.75	+0.1
1,546,558	-		ABZR87_RS23105	0.75	-1.0