Experiment: Pimelic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS02140 and ABZR87_RS02145 are separated by 16 nucleotides ABZR87_RS02145 and ABZR87_RS02150 overlap by 1 nucleotides ABZR87_RS02150 and ABZR87_RS02155 are separated by 13 nucleotides
ABZR87_RS02140: ABZR87_RS02140 - anthranilate synthase component I, at 459,127 to 460,656
_RS02140
ABZR87_RS02145: ABZR87_RS02145 - aminodeoxychorismate/anthranilate synthase component II, at 460,673 to 461,242
_RS02145
ABZR87_RS02150: ABZR87_RS02150 - lysozyme inhibitor LprI family protein, at 461,242 to 461,679
_RS02150
ABZR87_RS02155: ABZR87_RS02155 - anthranilate phosphoribosyltransferase, at 461,693 to 462,730
_RS02155
Position (kb) 460
461
462 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 459.677 kb on - strand, within ABZR87_RS02140 at 459.677 kb on - strand, within ABZR87_RS02140 at 459.677 kb on - strand, within ABZR87_RS02140 at 459.677 kb on - strand, within ABZR87_RS02140 at 459.796 kb on + strand, within ABZR87_RS02140 at 459.796 kb on + strand, within ABZR87_RS02140 at 459.797 kb on - strand, within ABZR87_RS02140 at 459.797 kb on - strand, within ABZR87_RS02140 at 459.797 kb on - strand, within ABZR87_RS02140 at 459.826 kb on + strand, within ABZR87_RS02140 at 459.826 kb on + strand, within ABZR87_RS02140 at 459.826 kb on + strand, within ABZR87_RS02140 at 459.826 kb on + strand, within ABZR87_RS02140 at 459.826 kb on + strand, within ABZR87_RS02140 at 459.826 kb on + strand, within ABZR87_RS02140 at 459.827 kb on - strand, within ABZR87_RS02140 at 459.827 kb on - strand, within ABZR87_RS02140 at 459.827 kb on - strand, within ABZR87_RS02140 at 459.827 kb on - strand, within ABZR87_RS02140 at 459.827 kb on - strand, within ABZR87_RS02140 at 459.940 kb on + strand, within ABZR87_RS02140 at 459.940 kb on + strand, within ABZR87_RS02140 at 459.940 kb on + strand, within ABZR87_RS02140 at 459.940 kb on + strand, within ABZR87_RS02140 at 459.940 kb on + strand, within ABZR87_RS02140 at 459.940 kb on + strand, within ABZR87_RS02140 at 459.941 kb on - strand, within ABZR87_RS02140 at 459.941 kb on - strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.946 kb on + strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.947 kb on - strand, within ABZR87_RS02140 at 459.952 kb on + strand, within ABZR87_RS02140 at 459.952 kb on + strand, within ABZR87_RS02140 at 459.952 kb on + strand, within ABZR87_RS02140 at 459.953 kb on - strand, within ABZR87_RS02140 at 459.953 kb on - strand, within ABZR87_RS02140 at 459.953 kb on - strand, within ABZR87_RS02140 at 459.953 kb on - strand, within ABZR87_RS02140 at 460.268 kb on - strand, within ABZR87_RS02140 at 460.268 kb on - strand, within ABZR87_RS02140 at 460.268 kb on - strand, within ABZR87_RS02140 at 460.268 kb on - strand, within ABZR87_RS02140 at 460.435 kb on + strand, within ABZR87_RS02140 at 460.435 kb on + strand, within ABZR87_RS02140 at 460.435 kb on + strand, within ABZR87_RS02140 at 460.435 kb on + strand, within ABZR87_RS02140 at 460.435 kb on + strand, within ABZR87_RS02140 at 460.436 kb on - strand, within ABZR87_RS02140 at 460.436 kb on - strand, within ABZR87_RS02140 at 460.436 kb on - strand, within ABZR87_RS02140 at 460.436 kb on - strand, within ABZR87_RS02140 at 460.436 kb on - strand, within ABZR87_RS02140 at 460.453 kb on + strand, within ABZR87_RS02140 at 460.454 kb on - strand, within ABZR87_RS02140 at 460.454 kb on - strand, within ABZR87_RS02140 at 460.454 kb on - strand, within ABZR87_RS02140 at 460.454 kb on - strand, within ABZR87_RS02140 at 460.525 kb on + strand at 460.525 kb on + strand at 460.525 kb on + strand at 460.525 kb on + strand at 460.525 kb on + strand at 460.525 kb on + strand at 460.525 kb on + strand at 460.525 kb on + strand at 460.526 kb on - strand at 460.526 kb on - strand at 460.526 kb on - strand at 460.526 kb on - strand at 460.526 kb on - strand at 460.547 kb on + strand at 460.547 kb on + strand at 460.547 kb on + strand at 460.660 kb on + strand at 460.661 kb on - strand at 460.690 kb on + strand at 460.691 kb on - strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.694 kb on + strand at 460.695 kb on - strand at 460.695 kb on - strand at 460.695 kb on - strand at 460.695 kb on - strand at 460.695 kb on - strand at 460.705 kb on + strand at 460.705 kb on + strand at 460.705 kb on + strand at 460.706 kb on - strand at 460.706 kb on - strand at 460.706 kb on - strand at 460.709 kb on + strand at 460.709 kb on + strand at 460.709 kb on + strand at 460.709 kb on + strand at 460.709 kb on + strand at 460.710 kb on - strand at 460.710 kb on - strand at 460.710 kb on - strand at 460.710 kb on - strand at 460.710 kb on - strand at 460.710 kb on - strand at 460.710 kb on - strand at 460.724 kb on + strand at 460.724 kb on + strand at 460.724 kb on + strand at 461.051 kb on + strand, within ABZR87_RS02145 at 461.051 kb on + strand, within ABZR87_RS02145 at 461.052 kb on - strand, within ABZR87_RS02145 at 461.101 kb on + strand, within ABZR87_RS02145 at 461.512 kb on + strand, within ABZR87_RS02150 at 461.513 kb on - strand, within ABZR87_RS02150 at 461.513 kb on - strand, within ABZR87_RS02150 at 461.513 kb on - strand, within ABZR87_RS02150 at 461.681 kb on + strand at 461.681 kb on + strand at 461.681 kb on + strand at 461.681 kb on + strand at 461.682 kb on - strand at 461.728 kb on + strand at 461.729 kb on - strand at 462.025 kb on + strand, within ABZR87_RS02155 at 462.025 kb on + strand, within ABZR87_RS02155 at 462.025 kb on + strand, within ABZR87_RS02155 at 462.025 kb on + strand, within ABZR87_RS02155 at 462.026 kb on - strand, within ABZR87_RS02155
Per-strain Table
Position Strand Gene LocusTag Fraction Pimelic (C) remove 459,677 - ABZR87_RS02140 0.36 -3.5 459,677 - ABZR87_RS02140 0.36 -3.5 459,677 - ABZR87_RS02140 0.36 -3.5 459,677 - ABZR87_RS02140 0.36 -2.7 459,796 + ABZR87_RS02140 0.44 -2.9 459,796 + ABZR87_RS02140 0.44 -1.1 459,797 - ABZR87_RS02140 0.44 -0.8 459,797 - ABZR87_RS02140 0.44 -3.6 459,797 - ABZR87_RS02140 0.44 -4.7 459,826 + ABZR87_RS02140 0.46 -2.9 459,826 + ABZR87_RS02140 0.46 -1.6 459,826 + ABZR87_RS02140 0.46 -2.5 459,826 + ABZR87_RS02140 0.46 -1.9 459,826 + ABZR87_RS02140 0.46 -2.1 459,826 + ABZR87_RS02140 0.46 -0.3 459,827 - ABZR87_RS02140 0.46 -3.9 459,827 - ABZR87_RS02140 0.46 -5.1 459,827 - ABZR87_RS02140 0.46 -2.3 459,827 - ABZR87_RS02140 0.46 -3.6 459,827 - ABZR87_RS02140 0.46 -4.2 459,940 + ABZR87_RS02140 0.53 -3.4 459,940 + ABZR87_RS02140 0.53 -2.4 459,940 + ABZR87_RS02140 0.53 -2.0 459,940 + ABZR87_RS02140 0.53 -2.1 459,940 + ABZR87_RS02140 0.53 -3.0 459,940 + ABZR87_RS02140 0.53 -2.7 459,941 - ABZR87_RS02140 0.53 -2.5 459,941 - ABZR87_RS02140 0.53 -3.5 459,946 + ABZR87_RS02140 0.54 -3.6 459,946 + ABZR87_RS02140 0.54 -3.0 459,946 + ABZR87_RS02140 0.54 -2.6 459,946 + ABZR87_RS02140 0.54 -3.6 459,946 + ABZR87_RS02140 0.54 -1.1 459,946 + ABZR87_RS02140 0.54 -3.6 459,946 + ABZR87_RS02140 0.54 -4.3 459,946 + ABZR87_RS02140 0.54 -5.3 459,946 + ABZR87_RS02140 0.54 -4.3 459,946 + ABZR87_RS02140 0.54 -3.2 459,947 - ABZR87_RS02140 0.54 -3.5 459,947 - ABZR87_RS02140 0.54 -3.1 459,947 - ABZR87_RS02140 0.54 -3.0 459,947 - ABZR87_RS02140 0.54 -2.8 459,947 - ABZR87_RS02140 0.54 -2.3 459,947 - ABZR87_RS02140 0.54 -3.2 459,947 - ABZR87_RS02140 0.54 -3.0 459,947 - ABZR87_RS02140 0.54 -3.1 459,947 - ABZR87_RS02140 0.54 -3.7 459,947 - ABZR87_RS02140 0.54 -0.8 459,947 - ABZR87_RS02140 0.54 -2.1 459,947 - ABZR87_RS02140 0.54 -1.8 459,947 - ABZR87_RS02140 0.54 -2.7 459,947 - ABZR87_RS02140 0.54 -2.7 459,952 + ABZR87_RS02140 0.54 -0.3 459,952 + ABZR87_RS02140 0.54 -3.1 459,952 + ABZR87_RS02140 0.54 +1.2 459,953 - ABZR87_RS02140 0.54 -1.8 459,953 - ABZR87_RS02140 0.54 -3.8 459,953 - ABZR87_RS02140 0.54 -3.7 459,953 - ABZR87_RS02140 0.54 -2.2 460,268 - ABZR87_RS02140 0.75 -3.9 460,268 - ABZR87_RS02140 0.75 -4.6 460,268 - ABZR87_RS02140 0.75 -4.9 460,268 - ABZR87_RS02140 0.75 -3.8 460,435 + ABZR87_RS02140 0.85 -3.0 460,435 + ABZR87_RS02140 0.85 -0.3 460,435 + ABZR87_RS02140 0.85 -2.3 460,435 + ABZR87_RS02140 0.85 -1.1 460,435 + ABZR87_RS02140 0.85 -3.4 460,436 - ABZR87_RS02140 0.86 -3.9 460,436 - ABZR87_RS02140 0.86 -4.0 460,436 - ABZR87_RS02140 0.86 -4.9 460,436 - ABZR87_RS02140 0.86 -3.4 460,436 - ABZR87_RS02140 0.86 -3.6 460,453 + ABZR87_RS02140 0.87 -4.0 460,454 - ABZR87_RS02140 0.87 -2.9 460,454 - ABZR87_RS02140 0.87 -3.7 460,454 - ABZR87_RS02140 0.87 -3.6 460,454 - ABZR87_RS02140 0.87 -2.8 460,525 + -2.9 460,525 + -3.7 460,525 + -2.2 460,525 + -4.2 460,525 + -2.1 460,525 + -3.3 460,525 + -2.9 460,525 + -3.7 460,526 - -4.2 460,526 - -2.6 460,526 - -0.8 460,526 - -4.6 460,526 - -0.6 460,547 + -3.6 460,547 + -4.8 460,547 + -1.3 460,660 + -0.1 460,661 - +0.2 460,690 + -1.6 460,691 - -0.8 460,694 + -3.5 460,694 + -4.5 460,694 + -3.6 460,694 + -3.0 460,694 + -3.2 460,694 + -3.8 460,694 + -2.9 460,694 + -3.9 460,695 - -2.5 460,695 - -3.9 460,695 - -2.9 460,695 - -3.1 460,695 - -2.8 460,705 + -1.8 460,705 + -4.8 460,705 + -4.0 460,706 - -3.6 460,706 - -1.3 460,706 - -3.5 460,709 + -2.3 460,709 + -5.3 460,709 + -3.7 460,709 + -4.1 460,709 + -3.8 460,710 - -4.4 460,710 - -4.4 460,710 - -4.3 460,710 - -4.3 460,710 - -4.1 460,710 - -2.3 460,710 - -4.8 460,724 + -4.2 460,724 + -2.1 460,724 + -2.5 461,051 + ABZR87_RS02145 0.66 +0.2 461,051 + ABZR87_RS02145 0.66 -3.4 461,052 - ABZR87_RS02145 0.66 -3.1 461,101 + ABZR87_RS02145 0.75 -2.5 461,512 + ABZR87_RS02150 0.62 +0.2 461,513 - ABZR87_RS02150 0.62 +1.5 461,513 - ABZR87_RS02150 0.62 -1.0 461,513 - ABZR87_RS02150 0.62 -0.5 461,681 + -0.2 461,681 + -0.0 461,681 + +1.2 461,681 + +0.1 461,682 - +1.0 461,728 + -4.8 461,729 - -3.2 462,025 + ABZR87_RS02155 0.32 -4.4 462,025 + ABZR87_RS02155 0.32 -3.3 462,025 + ABZR87_RS02155 0.32 -4.5 462,025 + ABZR87_RS02155 0.32 -4.1 462,026 - ABZR87_RS02155 0.32 -2.9
Or see this region's nucleotide sequence