Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05505

Experiment: adipate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	adipate (C)
1,168,186	-				-0.1
1,168,233	+				-0.1
1,168,233	+				-1.2
1,168,233	+				+0.3
1,168,233	+				+0.3
1,168,233	+				-0.5
1,168,234	-				+0.6
1,168,234	-				+0.1
1,168,234	-				+0.5
1,168,234	-				-0.5
1,168,299	+		ABZR87_RS05500	0.13	+0.7
1,168,300	-		ABZR87_RS05500	0.13	-0.7
1,168,337	+		ABZR87_RS05500	0.17	-0.5
1,168,337	+		ABZR87_RS05500	0.17	-0.1
1,168,338	-		ABZR87_RS05500	0.17	+0.3
1,168,338	-		ABZR87_RS05500	0.17	-0.0
1,168,338	-		ABZR87_RS05500	0.17	-1.1
1,168,341	+		ABZR87_RS05500	0.17	-0.4
1,168,342	-		ABZR87_RS05500	0.17	-0.4
1,168,342	-		ABZR87_RS05500	0.17	-0.1
1,168,342	-		ABZR87_RS05500	0.17	+0.9
1,168,377	+		ABZR87_RS05500	0.21	-2.2
1,168,377	+		ABZR87_RS05500	0.21	-1.9
1,168,378	-		ABZR87_RS05500	0.21	-1.2
1,168,427	+		ABZR87_RS05500	0.27	-1.9
1,168,427	+		ABZR87_RS05500	0.27	-1.8
1,168,656	+		ABZR87_RS05500	0.52	+0.6
1,168,656	+		ABZR87_RS05500	0.52	+0.0
1,168,656	+		ABZR87_RS05500	0.52	+0.1
1,168,830	+		ABZR87_RS05500	0.71	-0.6
1,168,830	+		ABZR87_RS05500	0.71	-0.9
1,168,830	+		ABZR87_RS05500	0.71	-0.3
1,168,830	+		ABZR87_RS05500	0.71	+0.8
1,168,831	-		ABZR87_RS05500	0.71	-0.3
1,169,200	+				+0.1
1,169,200	+				-1.9
1,169,617	+		ABZR87_RS05505	0.20	+0.5
1,169,617	+		ABZR87_RS05505	0.20	+1.8
1,169,617	+		ABZR87_RS05505	0.20	+1.1
1,169,617	+		ABZR87_RS05505	0.20	+0.1
1,169,617	+		ABZR87_RS05505	0.20	+1.9
1,169,617	+		ABZR87_RS05505	0.20	+1.3
1,169,618	-		ABZR87_RS05505	0.20	+0.9
1,169,618	-		ABZR87_RS05505	0.20	+1.2
1,169,763	+		ABZR87_RS05505	0.27	+0.8
1,169,763	+		ABZR87_RS05505	0.27	-0.3
1,169,763	+		ABZR87_RS05505	0.27	+0.8
1,169,763	+		ABZR87_RS05505	0.27	+1.7
1,169,764	-		ABZR87_RS05505	0.27	+0.4
1,169,764	-		ABZR87_RS05505	0.27	+1.5
1,169,764	-		ABZR87_RS05505	0.27	+1.5
1,170,092	+		ABZR87_RS05505	0.42	+1.0
1,170,092	+		ABZR87_RS05505	0.42	+1.6
1,170,092	+		ABZR87_RS05505	0.42	+1.4
1,170,092	+		ABZR87_RS05505	0.42	+0.9
1,170,092	+		ABZR87_RS05505	0.42	+1.1
1,170,092	+		ABZR87_RS05505	0.42	+0.6
1,170,093	-		ABZR87_RS05505	0.42	+1.3
1,170,138	+		ABZR87_RS05505	0.44	+0.4
1,170,139	-		ABZR87_RS05505	0.44	+0.9
1,170,293	+		ABZR87_RS05505	0.51	+2.3
1,170,293	+		ABZR87_RS05505	0.51	+1.2
1,170,293	+		ABZR87_RS05505	0.51	+0.7
1,170,293	+		ABZR87_RS05505	0.51	-0.2
1,170,293	+		ABZR87_RS05505	0.51	-1.9
1,170,796	+		ABZR87_RS05505	0.73	+1.1
1,170,796	+		ABZR87_RS05505	0.73	+0.7
1,170,797	-		ABZR87_RS05505	0.73	+0.0
1,170,797	-		ABZR87_RS05505	0.73	+0.9
1,170,983	+		ABZR87_RS05505	0.82	+1.5
1,170,983	+		ABZR87_RS05505	0.82	+0.6
1,170,983	+		ABZR87_RS05505	0.82	-0.3
1,170,983	+		ABZR87_RS05505	0.82	+1.2
1,170,983	+		ABZR87_RS05505	0.82	+1.3
1,170,983	+		ABZR87_RS05505	0.82	+1.5
1,170,983	+		ABZR87_RS05505	0.82	+0.9
1,170,984	-		ABZR87_RS05505	0.82	+0.9
1,170,984	-		ABZR87_RS05505	0.82	+1.0
1,170,984	-		ABZR87_RS05505	0.82	+1.1
1,170,986	+		ABZR87_RS05505	0.82	+2.0
1,170,987	-		ABZR87_RS05505	0.82	+1.4
1,171,000	+		ABZR87_RS05505	0.83	+0.4
1,171,000	+		ABZR87_RS05505	0.83	+1.1
1,171,000	+		ABZR87_RS05505	0.83	+0.2
1,171,000	+		ABZR87_RS05505	0.83	+0.4
1,171,000	+		ABZR87_RS05505	0.83	+1.3
1,171,000	+		ABZR87_RS05505	0.83	+1.4
1,171,000	+		ABZR87_RS05505	0.83	-0.3
1,171,000	+		ABZR87_RS05505	0.83	+1.5
1,171,001	-		ABZR87_RS05505	0.83	+1.9
1,171,001	-		ABZR87_RS05505	0.83	+1.5
1,171,001	-		ABZR87_RS05505	0.83	+0.8
1,171,001	-		ABZR87_RS05505	0.83	+1.0
1,171,001	-		ABZR87_RS05505	0.83	+0.7
1,171,001	-		ABZR87_RS05505	0.83	+0.6
1,171,001	-		ABZR87_RS05505	0.83	+1.5
1,171,001	-		ABZR87_RS05505	0.83	+1.7
1,171,049	+		ABZR87_RS05505	0.85	+1.3
1,171,145	+		ABZR87_RS05505	0.89	+1.3
1,171,145	+		ABZR87_RS05505	0.89	+1.7
1,171,145	+		ABZR87_RS05505	0.89	+1.0
1,171,145	+		ABZR87_RS05505	0.89	+0.9
1,171,145	+		ABZR87_RS05505	0.89	+0.9
1,171,145	+		ABZR87_RS05505	0.89	+1.1
1,171,145	+		ABZR87_RS05505	0.89	+2.0
1,171,145	+		ABZR87_RS05505	0.89	+0.9
1,171,145	+		ABZR87_RS05505	0.89	+0.6
1,171,146	-		ABZR87_RS05505	0.89	+1.4
1,171,146	-		ABZR87_RS05505	0.89	+1.0
1,171,146	-		ABZR87_RS05505	0.89	+1.4
1,171,187	+				+2.5
1,171,187	+				+0.0
1,171,187	+				+1.0
1,171,187	+				+2.1
1,171,188	-				+1.2
1,171,188	-				+0.9
1,171,188	-				+1.6
1,171,188	-				+1.6
1,171,188	-				+0.9
1,171,196	+				+0.7
1,171,197	-				+1.0
1,171,386	+				+0.7
1,171,386	+				+1.6
1,171,386	+				+0.9
1,171,387	-				+0.5
1,171,387	-				+0.9
1,171,387	-				+0.0
1,171,387	-				-0.1
1,171,387	-				+0.4
1,171,542	+				-1.9
1,171,542	+				+0.3
1,171,542	+				+0.0
1,171,542	+				+0.0
1,171,542	+				-0.3
1,171,543	-				-0.2
1,171,543	-				-0.1
1,171,543	-				-0.8
1,171,543	-				-0.1
1,171,543	-				-0.9
1,171,543	-				-0.7
1,171,543	-				-0.8
1,171,624	+				-1.6
1,171,657	+				+0.4
1,171,657	+				+0.3
1,171,658	-				-3.0
1,171,658	-				-0.7
1,171,832	-		ABZR87_RS05510	0.33	-1.6
1,171,948	+		ABZR87_RS05510	0.52	+0.5
1,171,948	+		ABZR87_RS05510	0.52	+0.8
1,171,949	-		ABZR87_RS05510	0.52	+0.7
1,171,949	-		ABZR87_RS05510	0.52	-1.9
1,171,949	-		ABZR87_RS05510	0.52	-1.0
1,172,165	-		ABZR87_RS05510	0.87	+1.1
1,172,182	+				-0.5
1,172,182	+				-0.6
1,172,183	-				+0.3
1,172,269	+				-0.2
1,172,270	-				+0.9
1,172,270	-				-0.2