Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT4458

Experiment: BHIS with Dimethyl Sulfoxide 0.2 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS with Dimethyl Sulfoxide 0.2 vol%
5,867,246	-		BT4456	0.85	+0.1
5,867,347	-				-0.6
5,867,434	+				-1.1
5,867,435	-				+1.7
5,867,491	+				-2.2
5,867,491	+				-2.9
5,867,526	+		BT4457	0.12	+0.1
5,867,527	-		BT4457	0.12	-0.7
5,867,527	-		BT4457	0.12	-1.4
5,867,593	-		BT4457	0.24	+0.1
5,867,610	+		BT4457	0.26	-1.0
5,867,611	-		BT4457	0.27	+1.5
5,867,694	+		BT4457	0.41	-1.3
5,867,695	-		BT4457	0.41	-1.9
5,867,897	+		BT4457	0.76	-1.5
5,868,028	-				+0.1
5,868,087	+				+1.1
5,868,087	+				-2.2
5,868,123	-				-1.0
5,868,130	-				-2.1
5,868,173	+				+0.1
5,868,175	+				+0.1
5,868,177	+				-1.9
5,868,178	-				-0.5
5,868,178	-				-1.9
5,868,225	-				-1.7
5,868,225	-				+0.1
5,868,229	-				-0.9
5,868,231	+				-0.9
5,868,245	-				-2.9
5,868,253	-				-1.7
5,868,258	-				-0.9
5,868,384	+		BT4458	0.16	+0.1
5,868,478	-		BT4458	0.27	+0.1
5,868,481	+		BT4458	0.27	-1.9
5,868,564	-		BT4458	0.37	-3.0
5,868,745	+		BT4458	0.58	-2.0
5,868,746	-		BT4458	0.58	-3.2
5,868,746	-		BT4458	0.58	-0.9
5,868,786	+		BT4458	0.62	-2.2
5,868,787	-		BT4458	0.63	+0.1
5,868,787	-		BT4458	0.63	-1.5
5,868,830	+		BT4458	0.67	-0.9
5,868,831	-		BT4458	0.68	-0.9
5,868,832	+		BT4458	0.68	-2.2
5,868,833	-		BT4458	0.68	-1.5
5,868,839	-		BT4458	0.68	+0.1
5,868,839	-		BT4458	0.68	-1.7
5,868,912	+		BT4458	0.77	+0.1
5,869,027	+				-2.5
5,869,078	-				+0.1
5,869,086	-				-1.3
5,869,112	-				-1.4
5,869,112	-				+1.7
5,869,112	-				-0.6
5,869,169	+				-0.9
5,869,183	-				-2.0
5,869,234	+				+0.1
5,869,234	+				-2.3
5,869,234	+				+0.5
5,869,234	+				-0.9
5,869,271	-				+0.2
5,869,294	-				+0.1
5,869,295	+				+0.1
5,869,307	-				-0.2
5,869,345	+		BT4459	0.13	+1.7
5,869,345	+		BT4459	0.13	-0.9
5,869,349	+		BT4459	0.13	-0.0
5,869,349	+		BT4459	0.13	-2.7
5,869,350	-		BT4459	0.13	-0.9
5,869,350	-		BT4459	0.13	-0.9
5,869,354	-		BT4459	0.14	-2.5
5,869,354	-		BT4459	0.14	-0.5
5,869,395	+		BT4459	0.17	+0.7
5,869,396	-		BT4459	0.17	-1.3
5,869,396	-		BT4459	0.17	-2.1
5,869,400	+		BT4459	0.18	+0.1
5,869,431	+		BT4459	0.20	+0.1
5,869,432	-		BT4459	0.20	-1.3
5,869,607	+		BT4459	0.35	-0.9
5,869,636	+		BT4459	0.38	+0.7
5,869,636	+		BT4459	0.38	-2.9
5,869,650	+		BT4459	0.39	-2.7
5,869,650	+		BT4459	0.39	-3.8
5,869,671	+		BT4459	0.41	+1.1
5,869,672	-		BT4459	0.41	-2.9
5,869,693	-		BT4459	0.43	-1.2
5,869,697	-		BT4459	0.43	-1.6
5,869,697	-		BT4459	0.43	-2.5
5,869,697	-		BT4459	0.43	-1.5
5,869,716	-		BT4459	0.45	-0.9
5,869,722	+		BT4459	0.45	-1.5
5,869,723	-		BT4459	0.45	-1.8
5,869,723	-		BT4459	0.45	-0.9
5,869,803	+		BT4459	0.52	-0.9
5,869,803	+		BT4459	0.52	-1.5
5,869,804	-		BT4459	0.52	-1.5
5,869,804	-		BT4459	0.52	-1.2
5,869,804	-		BT4459	0.52	-1.0
5,869,822	+		BT4459	0.54	-1.9
5,869,890	+		BT4459	0.59	-3.8
5,869,895	+		BT4459	0.60	-0.9
5,869,968	+		BT4459	0.66	-1.7
5,870,025	+		BT4459	0.71	-1.0
5,870,026	-		BT4459	0.71	-1.6
5,870,027	+		BT4459	0.71	-0.0
5,870,112	-		BT4459	0.78	-2.2
5,870,112	-		BT4459	0.78	+0.1