Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS18735 and ABZR87_RS18740 are separated by 131 nucleotides ABZR87_RS18740 and ABZR87_RS18745 are separated by 143 nucleotides ABZR87_RS18745 and ABZR87_RS18750 are separated by 161 nucleotides
ABZR87_RS18735: ABZR87_RS18735 - sulfite exporter TauE/SafE family protein, at 556,096 to 556,854
_RS18735
ABZR87_RS18740: ABZR87_RS18740 - LysR substrate-binding domain-containing protein, at 556,986 to 557,870
_RS18740
ABZR87_RS18745: ABZR87_RS18745 - hypothetical protein, at 558,014 to 558,535
_RS18745
ABZR87_RS18750: ABZR87_RS18750 - AMP-binding protein, at 558,697 to 560,394
_RS18750
Position (kb)
556
557
558 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 556.013 kb on + strand at 556.013 kb on + strand at 556.013 kb on + strand at 556.014 kb on - strand at 556.014 kb on - strand at 556.169 kb on + strand at 556.212 kb on - strand, within ABZR87_RS18735 at 556.410 kb on - strand, within ABZR87_RS18735 at 556.418 kb on + strand, within ABZR87_RS18735 at 556.418 kb on + strand, within ABZR87_RS18735 at 556.418 kb on + strand, within ABZR87_RS18735 at 556.418 kb on + strand, within ABZR87_RS18735 at 556.418 kb on + strand, within ABZR87_RS18735 at 556.418 kb on + strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.419 kb on - strand, within ABZR87_RS18735 at 556.713 kb on + strand, within ABZR87_RS18735 at 556.930 kb on + strand at 556.930 kb on + strand at 556.930 kb on + strand at 556.930 kb on + strand at 556.930 kb on + strand at 556.931 kb on - strand at 556.931 kb on - strand at 556.931 kb on - strand at 556.931 kb on - strand at 557.244 kb on + strand, within ABZR87_RS18740 at 557.266 kb on - strand, within ABZR87_RS18740 at 557.357 kb on - strand, within ABZR87_RS18740 at 557.598 kb on + strand, within ABZR87_RS18740 at 557.598 kb on + strand, within ABZR87_RS18740 at 557.598 kb on + strand, within ABZR87_RS18740 at 557.598 kb on + strand, within ABZR87_RS18740 at 557.598 kb on + strand, within ABZR87_RS18740 at 557.598 kb on + strand, within ABZR87_RS18740 at 557.599 kb on - strand, within ABZR87_RS18740 at 557.599 kb on - strand, within ABZR87_RS18740 at 557.599 kb on - strand, within ABZR87_RS18740 at 557.599 kb on - strand, within ABZR87_RS18740 at 557.599 kb on - strand, within ABZR87_RS18740 at 557.640 kb on + strand, within ABZR87_RS18740 at 557.641 kb on - strand, within ABZR87_RS18740 at 557.939 kb on - strand at 557.939 kb on - strand at 558.086 kb on + strand, within ABZR87_RS18745 at 558.218 kb on + strand, within ABZR87_RS18745 at 558.218 kb on + strand, within ABZR87_RS18745 at 558.218 kb on + strand, within ABZR87_RS18745 at 558.218 kb on + strand, within ABZR87_RS18745 at 558.218 kb on + strand, within ABZR87_RS18745 at 558.218 kb on + strand, within ABZR87_RS18745 at 558.219 kb on - strand, within ABZR87_RS18745 at 558.219 kb on - strand, within ABZR87_RS18745 at 558.219 kb on - strand, within ABZR87_RS18745 at 558.219 kb on - strand, within ABZR87_RS18745 at 558.219 kb on - strand, within ABZR87_RS18745 at 558.219 kb on - strand, within ABZR87_RS18745 at 558.220 kb on + strand, within ABZR87_RS18745 at 558.220 kb on + strand, within ABZR87_RS18745 at 558.220 kb on + strand, within ABZR87_RS18745 at 558.220 kb on + strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.221 kb on - strand, within ABZR87_RS18745 at 558.233 kb on + strand, within ABZR87_RS18745 at 558.367 kb on - strand, within ABZR87_RS18745 at 558.387 kb on + strand, within ABZR87_RS18745 at 558.388 kb on - strand, within ABZR87_RS18745 at 558.388 kb on - strand, within ABZR87_RS18745 at 558.388 kb on - strand, within ABZR87_RS18745 at 558.388 kb on - strand, within ABZR87_RS18745 at 558.584 kb on + strand at 558.584 kb on + strand at 558.585 kb on - strand at 558.585 kb on - strand at 558.585 kb on - strand at 558.586 kb on + strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.587 kb on - strand at 558.633 kb on + strand at 558.757 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 556,013 + -2.2 556,013 + -1.5 556,013 + +0.7 556,014 - +0.4 556,014 - +1.0 556,169 + +1.4 556,212 - ABZR87_RS18735 0.15 -2.4 556,410 - ABZR87_RS18735 0.41 -1.8 556,418 + ABZR87_RS18735 0.42 +0.4 556,418 + ABZR87_RS18735 0.42 +1.5 556,418 + ABZR87_RS18735 0.42 -0.1 556,418 + ABZR87_RS18735 0.42 -0.1 556,418 + ABZR87_RS18735 0.42 -0.0 556,418 + ABZR87_RS18735 0.42 +0.8 556,419 - ABZR87_RS18735 0.43 -1.8 556,419 - ABZR87_RS18735 0.43 -3.4 556,419 - ABZR87_RS18735 0.43 -2.4 556,419 - ABZR87_RS18735 0.43 -2.2 556,419 - ABZR87_RS18735 0.43 -4.1 556,419 - ABZR87_RS18735 0.43 -4.9 556,419 - ABZR87_RS18735 0.43 -2.5 556,419 - ABZR87_RS18735 0.43 -2.0 556,713 + ABZR87_RS18735 0.81 +0.2 556,930 + -0.1 556,930 + -0.7 556,930 + -0.0 556,930 + +0.3 556,930 + +0.1 556,931 - -1.6 556,931 - -3.5 556,931 - -2.2 556,931 - -2.9 557,244 + ABZR87_RS18740 0.29 -0.8 557,266 - ABZR87_RS18740 0.32 -1.2 557,357 - ABZR87_RS18740 0.42 -1.9 557,598 + ABZR87_RS18740 0.69 -0.6 557,598 + ABZR87_RS18740 0.69 -1.6 557,598 + ABZR87_RS18740 0.69 -1.0 557,598 + ABZR87_RS18740 0.69 +0.9 557,598 + ABZR87_RS18740 0.69 -0.3 557,598 + ABZR87_RS18740 0.69 +1.0 557,599 - ABZR87_RS18740 0.69 -0.6 557,599 - ABZR87_RS18740 0.69 -1.1 557,599 - ABZR87_RS18740 0.69 -1.3 557,599 - ABZR87_RS18740 0.69 -2.8 557,599 - ABZR87_RS18740 0.69 -0.6 557,640 + ABZR87_RS18740 0.74 +0.1 557,641 - ABZR87_RS18740 0.74 +1.0 557,939 - -2.9 557,939 - -0.5 558,086 + ABZR87_RS18745 0.14 -0.8 558,218 + ABZR87_RS18745 0.39 -2.1 558,218 + ABZR87_RS18745 0.39 +1.0 558,218 + ABZR87_RS18745 0.39 +1.0 558,218 + ABZR87_RS18745 0.39 +0.1 558,218 + ABZR87_RS18745 0.39 -0.3 558,218 + ABZR87_RS18745 0.39 -0.2 558,219 - ABZR87_RS18745 0.39 -2.7 558,219 - ABZR87_RS18745 0.39 -3.6 558,219 - ABZR87_RS18745 0.39 -1.0 558,219 - ABZR87_RS18745 0.39 -0.6 558,219 - ABZR87_RS18745 0.39 -0.4 558,219 - ABZR87_RS18745 0.39 -2.1 558,220 + ABZR87_RS18745 0.39 -0.2 558,220 + ABZR87_RS18745 0.39 -0.8 558,220 + ABZR87_RS18745 0.39 -0.4 558,220 + ABZR87_RS18745 0.39 +0.1 558,221 - ABZR87_RS18745 0.40 -1.4 558,221 - ABZR87_RS18745 0.40 -2.0 558,221 - ABZR87_RS18745 0.40 -3.4 558,221 - ABZR87_RS18745 0.40 -1.6 558,221 - ABZR87_RS18745 0.40 -2.1 558,221 - ABZR87_RS18745 0.40 -1.2 558,221 - ABZR87_RS18745 0.40 -3.6 558,221 - ABZR87_RS18745 0.40 -1.0 558,233 + ABZR87_RS18745 0.42 -0.3 558,367 - ABZR87_RS18745 0.68 -0.5 558,387 + ABZR87_RS18745 0.71 -0.0 558,388 - ABZR87_RS18745 0.72 +0.1 558,388 - ABZR87_RS18745 0.72 -0.4 558,388 - ABZR87_RS18745 0.72 -2.2 558,388 - ABZR87_RS18745 0.72 -1.0 558,584 + +0.2 558,584 + -0.0 558,585 - -0.5 558,585 - -0.3 558,585 - -1.7 558,586 + -0.0 558,587 - -0.3 558,587 - -1.8 558,587 - -0.6 558,587 - +0.2 558,587 - +0.2 558,587 - -2.8 558,587 - -0.4 558,587 - +0.1 558,633 + +0.6 558,757 + -1.1
Or see this region's nucleotide sequence