Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16280 and ABZR87_RS16285 are separated by 318 nucleotides ABZR87_RS16285 and ABZR87_RS16290 are separated by 267 nucleotides
ABZR87_RS16280: ABZR87_RS16280 - ParB/RepB/Spo0J family partition protein, at 2,440 to 3,450
_RS16280
ABZR87_RS16285: ABZR87_RS16285 - hypothetical protein, at 3,769 to 4,587
_RS16285
ABZR87_RS16290: ABZR87_RS16290 - UTP--glucose-1-phosphate uridylyltransferase GalU, at 4,855 to 5,805
_RS16290
Position (kb) 3
4
5 Strain fitness (log2 ratio) -2
-1
0
1
2 at 3.443 kb on + strand at 3.443 kb on + strand at 3.444 kb on - strand at 3.448 kb on + strand at 3.448 kb on + strand at 3.448 kb on + strand at 3.448 kb on + strand at 3.448 kb on + strand at 3.448 kb on + strand at 3.449 kb on - strand at 3.449 kb on - strand at 3.449 kb on - strand at 3.449 kb on - strand at 3.578 kb on - strand at 3.667 kb on - strand at 3.669 kb on + strand at 3.683 kb on - strand at 3.840 kb on + strand at 3.916 kb on + strand, within ABZR87_RS16285 at 3.916 kb on + strand, within ABZR87_RS16285 at 3.917 kb on - strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.931 kb on + strand, within ABZR87_RS16285 at 3.932 kb on - strand, within ABZR87_RS16285 at 3.932 kb on - strand, within ABZR87_RS16285 at 3.932 kb on - strand, within ABZR87_RS16285 at 3.959 kb on + strand, within ABZR87_RS16285 at 3.978 kb on + strand, within ABZR87_RS16285 at 3.978 kb on + strand, within ABZR87_RS16285 at 3.978 kb on + strand, within ABZR87_RS16285 at 3.979 kb on - strand, within ABZR87_RS16285 at 4.032 kb on + strand, within ABZR87_RS16285 at 4.033 kb on - strand, within ABZR87_RS16285 at 4.116 kb on + strand, within ABZR87_RS16285 at 4.116 kb on + strand, within ABZR87_RS16285 at 4.116 kb on + strand, within ABZR87_RS16285 at 4.116 kb on + strand, within ABZR87_RS16285 at 4.116 kb on + strand, within ABZR87_RS16285 at 4.117 kb on - strand, within ABZR87_RS16285 at 4.117 kb on - strand, within ABZR87_RS16285 at 4.117 kb on - strand, within ABZR87_RS16285 at 4.117 kb on - strand, within ABZR87_RS16285 at 4.525 kb on + strand at 4.526 kb on - strand at 4.605 kb on - strand at 4.615 kb on + strand at 4.616 kb on - strand at 4.636 kb on + strand at 4.636 kb on + strand at 4.665 kb on + strand at 4.720 kb on + strand at 4.720 kb on + strand at 4.720 kb on + strand at 4.720 kb on + strand at 4.720 kb on + strand at 4.720 kb on + strand at 4.721 kb on - strand at 4.746 kb on + strand at 4.746 kb on + strand at 4.746 kb on + strand at 4.746 kb on + strand at 4.746 kb on + strand at 4.746 kb on + strand at 4.746 kb on + strand at 4.747 kb on - strand at 4.747 kb on - strand at 4.747 kb on - strand at 4.747 kb on - strand at 4.747 kb on - strand at 4.747 kb on - strand at 4.747 kb on - strand at 4.813 kb on + strand at 4.813 kb on + strand at 4.813 kb on + strand at 4.813 kb on + strand at 4.813 kb on + strand at 4.814 kb on - strand at 4.832 kb on + strand at 4.833 kb on - strand at 4.833 kb on - strand at 4.960 kb on - strand, within ABZR87_RS16290 at 4.976 kb on - strand, within ABZR87_RS16290 at 5.004 kb on + strand, within ABZR87_RS16290 at 5.005 kb on - strand, within ABZR87_RS16290 at 5.072 kb on - strand, within ABZR87_RS16290 at 5.072 kb on - strand, within ABZR87_RS16290 at 5.072 kb on - strand, within ABZR87_RS16290 at 5.072 kb on - strand, within ABZR87_RS16290 at 5.072 kb on - strand, within ABZR87_RS16290 at 5.072 kb on - strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.161 kb on + strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.162 kb on - strand, within ABZR87_RS16290 at 5.222 kb on + strand, within ABZR87_RS16290 at 5.223 kb on - strand, within ABZR87_RS16290 at 5.305 kb on + strand, within ABZR87_RS16290 at 5.305 kb on + strand, within ABZR87_RS16290 at 5.305 kb on + strand, within ABZR87_RS16290 at 5.306 kb on - strand, within ABZR87_RS16290 at 5.306 kb on - strand, within ABZR87_RS16290 at 5.306 kb on - strand, within ABZR87_RS16290 at 5.306 kb on - strand, within ABZR87_RS16290 at 5.306 kb on - strand, within ABZR87_RS16290 at 5.315 kb on - strand, within ABZR87_RS16290 at 5.480 kb on - strand, within ABZR87_RS16290
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 3,443 + +0.3 3,443 + -0.5 3,444 - +1.2 3,448 + +0.6 3,448 + +1.4 3,448 + -0.5 3,448 + -0.2 3,448 + -1.1 3,448 + +0.6 3,449 - -0.9 3,449 - +0.0 3,449 - -0.4 3,449 - +0.1 3,578 - -1.3 3,667 - -0.1 3,669 + +0.1 3,683 - -0.3 3,840 + +1.6 3,916 + ABZR87_RS16285 0.18 -1.7 3,916 + ABZR87_RS16285 0.18 +0.4 3,917 - ABZR87_RS16285 0.18 -0.1 3,931 + ABZR87_RS16285 0.20 -0.9 3,931 + ABZR87_RS16285 0.20 -0.6 3,931 + ABZR87_RS16285 0.20 +0.8 3,931 + ABZR87_RS16285 0.20 +0.8 3,931 + ABZR87_RS16285 0.20 -0.5 3,931 + ABZR87_RS16285 0.20 +1.2 3,931 + ABZR87_RS16285 0.20 -0.9 3,932 - ABZR87_RS16285 0.20 -1.0 3,932 - ABZR87_RS16285 0.20 +1.5 3,932 - ABZR87_RS16285 0.20 -1.3 3,959 + ABZR87_RS16285 0.23 -0.7 3,978 + ABZR87_RS16285 0.26 +1.2 3,978 + ABZR87_RS16285 0.26 -1.7 3,978 + ABZR87_RS16285 0.26 -0.1 3,979 - ABZR87_RS16285 0.26 -0.7 4,032 + ABZR87_RS16285 0.32 -0.8 4,033 - ABZR87_RS16285 0.32 -1.4 4,116 + ABZR87_RS16285 0.42 +0.4 4,116 + ABZR87_RS16285 0.42 -1.5 4,116 + ABZR87_RS16285 0.42 -0.8 4,116 + ABZR87_RS16285 0.42 -0.5 4,116 + ABZR87_RS16285 0.42 -1.1 4,117 - ABZR87_RS16285 0.42 +0.4 4,117 - ABZR87_RS16285 0.42 +1.2 4,117 - ABZR87_RS16285 0.42 -0.2 4,117 - ABZR87_RS16285 0.42 -0.7 4,525 + -0.5 4,526 - +0.3 4,605 - -1.0 4,615 + +1.6 4,616 - +0.1 4,636 + +0.1 4,636 + -1.0 4,665 + +0.7 4,720 + +0.4 4,720 + -1.1 4,720 + +0.3 4,720 + -0.3 4,720 + +0.0 4,720 + -0.2 4,721 - -1.3 4,746 + -2.1 4,746 + -0.4 4,746 + +0.7 4,746 + -0.6 4,746 + +0.2 4,746 + -0.8 4,746 + -2.6 4,747 - +0.1 4,747 - -0.2 4,747 - +0.0 4,747 - +0.0 4,747 - -2.0 4,747 - -0.7 4,747 - -1.1 4,813 + -0.0 4,813 + +0.7 4,813 + +1.0 4,813 + -0.7 4,813 + -0.5 4,814 - +0.4 4,832 + -0.3 4,833 - -0.4 4,833 - +0.2 4,960 - ABZR87_RS16290 0.11 +0.0 4,976 - ABZR87_RS16290 0.13 +0.0 5,004 + ABZR87_RS16290 0.16 -0.0 5,005 - ABZR87_RS16290 0.16 +0.3 5,072 - ABZR87_RS16290 0.23 -0.4 5,072 - ABZR87_RS16290 0.23 +0.2 5,072 - ABZR87_RS16290 0.23 +0.1 5,072 - ABZR87_RS16290 0.23 +0.9 5,072 - ABZR87_RS16290 0.23 +2.2 5,072 - ABZR87_RS16290 0.23 +1.3 5,161 + ABZR87_RS16290 0.32 -0.4 5,161 + ABZR87_RS16290 0.32 +0.1 5,161 + ABZR87_RS16290 0.32 -0.8 5,161 + ABZR87_RS16290 0.32 +0.3 5,161 + ABZR87_RS16290 0.32 -1.6 5,161 + ABZR87_RS16290 0.32 +0.7 5,161 + ABZR87_RS16290 0.32 -0.3 5,162 - ABZR87_RS16290 0.32 +0.4 5,162 - ABZR87_RS16290 0.32 -0.8 5,162 - ABZR87_RS16290 0.32 -0.7 5,162 - ABZR87_RS16290 0.32 -0.7 5,162 - ABZR87_RS16290 0.32 +0.5 5,162 - ABZR87_RS16290 0.32 -0.7 5,162 - ABZR87_RS16290 0.32 -0.2 5,162 - ABZR87_RS16290 0.32 +0.9 5,222 + ABZR87_RS16290 0.39 -0.4 5,223 - ABZR87_RS16290 0.39 +0.2 5,305 + ABZR87_RS16290 0.47 -0.9 5,305 + ABZR87_RS16290 0.47 -2.2 5,305 + ABZR87_RS16290 0.47 +0.7 5,306 - ABZR87_RS16290 0.47 -1.6 5,306 - ABZR87_RS16290 0.47 -0.3 5,306 - ABZR87_RS16290 0.47 -0.1 5,306 - ABZR87_RS16290 0.47 +0.7 5,306 - ABZR87_RS16290 0.47 +0.2 5,315 - ABZR87_RS16290 0.48 -1.3 5,480 - ABZR87_RS16290 0.66 -0.4
Or see this region's nucleotide sequence