Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS23435 and ABZR87_RS23440 overlap by 1 nucleotides ABZR87_RS23440 and ABZR87_RS23445 overlap by 14 nucleotides ABZR87_RS23445 and ABZR87_RS23450 are separated by 9 nucleotides
ABZR87_RS23435: ABZR87_RS23435 - malonate decarboxylase subunit alpha, at 1,621,954 to 1,623,642
_RS23435
ABZR87_RS23440: ABZR87_RS23440 - triphosphoribosyl-dephospho-CoA synthase, at 1,623,642 to 1,624,571
_RS23440
ABZR87_RS23445: ABZR87_RS23445 - malonate decarboxylase subunit delta, at 1,624,558 to 1,624,863
_RS23445
ABZR87_RS23450: ABZR87_RS23450 - biotin-independent malonate decarboxylase subunit beta, at 1,624,873 to 1,625,718
_RS23450
Position (kb)
1623
1624
1625 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1622.725 kb on + strand, within ABZR87_RS23435 at 1622.725 kb on + strand, within ABZR87_RS23435 at 1622.726 kb on - strand, within ABZR87_RS23435 at 1622.803 kb on + strand, within ABZR87_RS23435 at 1622.941 kb on + strand, within ABZR87_RS23435 at 1622.942 kb on - strand, within ABZR87_RS23435 at 1623.028 kb on + strand, within ABZR87_RS23435 at 1623.029 kb on - strand, within ABZR87_RS23435 at 1623.230 kb on + strand, within ABZR87_RS23435 at 1623.230 kb on + strand, within ABZR87_RS23435 at 1623.230 kb on + strand, within ABZR87_RS23435 at 1623.230 kb on + strand, within ABZR87_RS23435 at 1623.340 kb on + strand, within ABZR87_RS23435 at 1623.341 kb on - strand, within ABZR87_RS23435 at 1623.341 kb on - strand, within ABZR87_RS23435 at 1623.385 kb on + strand, within ABZR87_RS23435 at 1623.386 kb on - strand, within ABZR87_RS23435 at 1623.386 kb on - strand, within ABZR87_RS23435 at 1623.391 kb on + strand, within ABZR87_RS23435 at 1623.391 kb on + strand, within ABZR87_RS23435 at 1623.392 kb on - strand, within ABZR87_RS23435 at 1623.392 kb on - strand, within ABZR87_RS23435 at 1623.610 kb on + strand at 1623.680 kb on + strand at 1623.680 kb on + strand at 1623.681 kb on - strand at 1624.043 kb on - strand, within ABZR87_RS23440 at 1624.147 kb on - strand, within ABZR87_RS23440 at 1624.612 kb on + strand, within ABZR87_RS23445 at 1624.612 kb on + strand, within ABZR87_RS23445 at 1624.613 kb on - strand, within ABZR87_RS23445 at 1624.861 kb on + strand at 1624.862 kb on - strand at 1625.022 kb on + strand, within ABZR87_RS23450 at 1625.380 kb on + strand, within ABZR87_RS23450 at 1625.380 kb on + strand, within ABZR87_RS23450 at 1625.380 kb on + strand, within ABZR87_RS23450 at 1625.458 kb on + strand, within ABZR87_RS23450 at 1625.458 kb on + strand, within ABZR87_RS23450 at 1625.459 kb on - strand, within ABZR87_RS23450
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 1,622,725 + ABZR87_RS23435 0.46 -1.2 1,622,725 + ABZR87_RS23435 0.46 +0.7 1,622,726 - ABZR87_RS23435 0.46 -0.2 1,622,803 + ABZR87_RS23435 0.50 -1.7 1,622,941 + ABZR87_RS23435 0.58 -1.2 1,622,942 - ABZR87_RS23435 0.58 -2.2 1,623,028 + ABZR87_RS23435 0.64 -1.2 1,623,029 - ABZR87_RS23435 0.64 -1.7 1,623,230 + ABZR87_RS23435 0.76 -0.3 1,623,230 + ABZR87_RS23435 0.76 -1.5 1,623,230 + ABZR87_RS23435 0.76 -2.8 1,623,230 + ABZR87_RS23435 0.76 -2.6 1,623,340 + ABZR87_RS23435 0.82 -0.9 1,623,341 - ABZR87_RS23435 0.82 -1.4 1,623,341 - ABZR87_RS23435 0.82 -1.9 1,623,385 + ABZR87_RS23435 0.85 -2.6 1,623,386 - ABZR87_RS23435 0.85 -1.3 1,623,386 - ABZR87_RS23435 0.85 -0.9 1,623,391 + ABZR87_RS23435 0.85 -2.6 1,623,391 + ABZR87_RS23435 0.85 -1.5 1,623,392 - ABZR87_RS23435 0.85 -1.5 1,623,392 - ABZR87_RS23435 0.85 -0.9 1,623,610 + -2.3 1,623,680 + -0.7 1,623,680 + -2.6 1,623,681 - +0.1 1,624,043 - ABZR87_RS23440 0.43 -1.4 1,624,147 - ABZR87_RS23440 0.54 -3.0 1,624,612 + ABZR87_RS23445 0.18 -2.6 1,624,612 + ABZR87_RS23445 0.18 -1.2 1,624,613 - ABZR87_RS23445 0.18 -1.1 1,624,861 + -0.6 1,624,862 - -1.6 1,625,022 + ABZR87_RS23450 0.18 -3.5 1,625,380 + ABZR87_RS23450 0.60 -1.2 1,625,380 + ABZR87_RS23450 0.60 -1.2 1,625,380 + ABZR87_RS23450 0.60 -2.8 1,625,458 + ABZR87_RS23450 0.69 -1.2 1,625,458 + ABZR87_RS23450 0.69 -2.1 1,625,459 - ABZR87_RS23450 0.69 -1.8
Or see this region's nucleotide sequence