Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01710 and ABZR87_RS01715 overlap by 4 nucleotides ABZR87_RS01715 and ABZR87_RS01720 are separated by 163 nucleotides
ABZR87_RS01710: ABZR87_RS01710 - DMT family transporter, at 359,329 to 360,225
_RS01710
ABZR87_RS01715: ABZR87_RS01715 - M14 family metallopeptidase, at 360,222 to 361,304
_RS01715
ABZR87_RS01720: ABZR87_RS01720 - ribonucleotide-diphosphate reductase subunit beta, at 361,468 to 362,676
_RS01720
Position (kb) 360
361
362 Strain fitness (log2 ratio) -1
0
1
2
3 at 359.290 kb on + strand at 359.291 kb on - strand at 359.291 kb on - strand at 359.291 kb on - strand at 359.485 kb on + strand, within ABZR87_RS01710 at 359.485 kb on + strand, within ABZR87_RS01710 at 359.486 kb on - strand, within ABZR87_RS01710 at 359.486 kb on - strand, within ABZR87_RS01710 at 359.578 kb on + strand, within ABZR87_RS01710 at 359.579 kb on - strand, within ABZR87_RS01710 at 359.579 kb on - strand, within ABZR87_RS01710 at 359.614 kb on + strand, within ABZR87_RS01710 at 359.614 kb on + strand, within ABZR87_RS01710 at 359.615 kb on - strand, within ABZR87_RS01710 at 359.615 kb on - strand, within ABZR87_RS01710 at 359.615 kb on - strand, within ABZR87_RS01710 at 359.615 kb on - strand, within ABZR87_RS01710 at 359.799 kb on + strand, within ABZR87_RS01710 at 359.800 kb on - strand, within ABZR87_RS01710 at 359.800 kb on - strand, within ABZR87_RS01710 at 359.803 kb on + strand, within ABZR87_RS01710 at 359.803 kb on + strand, within ABZR87_RS01710 at 359.803 kb on + strand, within ABZR87_RS01710 at 359.804 kb on - strand, within ABZR87_RS01710 at 359.836 kb on + strand, within ABZR87_RS01710 at 359.836 kb on + strand, within ABZR87_RS01710 at 359.836 kb on + strand, within ABZR87_RS01710 at 359.837 kb on - strand, within ABZR87_RS01710 at 359.837 kb on - strand, within ABZR87_RS01710 at 359.837 kb on - strand, within ABZR87_RS01710 at 359.837 kb on - strand, within ABZR87_RS01710 at 360.252 kb on + strand at 360.252 kb on + strand at 360.252 kb on + strand at 360.253 kb on - strand at 360.253 kb on - strand at 360.253 kb on - strand at 360.274 kb on + strand at 360.274 kb on + strand at 360.275 kb on - strand at 360.275 kb on - strand at 360.275 kb on - strand at 360.275 kb on - strand at 360.275 kb on - strand at 360.275 kb on - strand at 360.275 kb on - strand at 360.307 kb on + strand at 360.307 kb on + strand at 360.307 kb on + strand at 360.308 kb on - strand at 360.308 kb on - strand at 360.308 kb on - strand at 360.308 kb on - strand at 360.308 kb on - strand at 360.321 kb on + strand at 360.321 kb on + strand at 360.321 kb on + strand at 360.322 kb on - strand at 360.475 kb on + strand, within ABZR87_RS01715 at 360.476 kb on - strand, within ABZR87_RS01715 at 360.733 kb on + strand, within ABZR87_RS01715 at 360.734 kb on - strand, within ABZR87_RS01715 at 360.734 kb on - strand, within ABZR87_RS01715 at 360.811 kb on + strand, within ABZR87_RS01715 at 360.811 kb on + strand, within ABZR87_RS01715 at 360.811 kb on + strand, within ABZR87_RS01715 at 360.811 kb on + strand, within ABZR87_RS01715 at 360.811 kb on + strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.812 kb on - strand, within ABZR87_RS01715 at 360.886 kb on - strand, within ABZR87_RS01715 at 360.887 kb on - strand, within ABZR87_RS01715 at 361.273 kb on + strand at 361.273 kb on + strand at 361.274 kb on - strand at 361.274 kb on - strand at 361.274 kb on - strand at 361.424 kb on + strand at 361.425 kb on - strand at 361.425 kb on - strand at 361.459 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 359,290 + -0.9 359,291 - +0.9 359,291 - -0.3 359,291 - -0.2 359,485 + ABZR87_RS01710 0.17 +0.2 359,485 + ABZR87_RS01710 0.17 +2.8 359,486 - ABZR87_RS01710 0.18 +0.5 359,486 - ABZR87_RS01710 0.18 -0.2 359,578 + ABZR87_RS01710 0.28 +0.1 359,579 - ABZR87_RS01710 0.28 +0.0 359,579 - ABZR87_RS01710 0.28 +0.1 359,614 + ABZR87_RS01710 0.32 +0.8 359,614 + ABZR87_RS01710 0.32 -0.3 359,615 - ABZR87_RS01710 0.32 +0.3 359,615 - ABZR87_RS01710 0.32 -0.9 359,615 - ABZR87_RS01710 0.32 +0.5 359,615 - ABZR87_RS01710 0.32 -0.2 359,799 + ABZR87_RS01710 0.52 +0.1 359,800 - ABZR87_RS01710 0.53 +0.9 359,800 - ABZR87_RS01710 0.53 -0.4 359,803 + ABZR87_RS01710 0.53 -1.0 359,803 + ABZR87_RS01710 0.53 -0.3 359,803 + ABZR87_RS01710 0.53 +0.2 359,804 - ABZR87_RS01710 0.53 -1.5 359,836 + ABZR87_RS01710 0.57 -0.4 359,836 + ABZR87_RS01710 0.57 +0.5 359,836 + ABZR87_RS01710 0.57 +0.5 359,837 - ABZR87_RS01710 0.57 +1.4 359,837 - ABZR87_RS01710 0.57 +0.4 359,837 - ABZR87_RS01710 0.57 -0.6 359,837 - ABZR87_RS01710 0.57 +1.0 360,252 + +1.0 360,252 + +0.5 360,252 + +0.4 360,253 - +0.4 360,253 - +1.0 360,253 - -0.1 360,274 + +0.4 360,274 + +0.6 360,275 - -0.9 360,275 - -0.1 360,275 - -0.6 360,275 - -0.2 360,275 - -1.3 360,275 - +0.5 360,275 - +0.4 360,307 + +0.3 360,307 + +0.5 360,307 + -0.6 360,308 - -0.2 360,308 - -0.7 360,308 - -0.0 360,308 - -0.5 360,308 - +1.1 360,321 + +0.5 360,321 + +0.5 360,321 + -0.6 360,322 - +1.5 360,475 + ABZR87_RS01715 0.23 -1.3 360,476 - ABZR87_RS01715 0.23 +0.2 360,733 + ABZR87_RS01715 0.47 +0.1 360,734 - ABZR87_RS01715 0.47 +0.1 360,734 - ABZR87_RS01715 0.47 -0.9 360,811 + ABZR87_RS01715 0.54 -0.6 360,811 + ABZR87_RS01715 0.54 -0.6 360,811 + ABZR87_RS01715 0.54 -0.2 360,811 + ABZR87_RS01715 0.54 +0.8 360,811 + ABZR87_RS01715 0.54 -0.0 360,812 - ABZR87_RS01715 0.54 +0.4 360,812 - ABZR87_RS01715 0.54 -0.4 360,812 - ABZR87_RS01715 0.54 -0.5 360,812 - ABZR87_RS01715 0.54 +1.1 360,812 - ABZR87_RS01715 0.54 -1.4 360,812 - ABZR87_RS01715 0.54 -1.2 360,812 - ABZR87_RS01715 0.54 +0.4 360,812 - ABZR87_RS01715 0.54 -0.2 360,812 - ABZR87_RS01715 0.54 -0.3 360,812 - ABZR87_RS01715 0.54 -0.3 360,886 - ABZR87_RS01715 0.61 +0.9 360,887 - ABZR87_RS01715 0.61 +0.3 361,273 + +0.0 361,273 + -0.8 361,274 - +0.2 361,274 - -0.5 361,274 - -0.1 361,424 + +0.8 361,425 - -0.5 361,425 - +0.4 361,459 + +1.0
Or see this region's nucleotide sequence