Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS22705 and ABZR87_RS22710 are separated by 16 nucleotides ABZR87_RS22710 and ABZR87_RS22715 are separated by 117 nucleotides
ABZR87_RS22705: ABZR87_RS22705 - DUF4349 domain-containing protein, at 1,453,428 to 1,454,273
_RS22705
ABZR87_RS22710: ABZR87_RS22710 - VOC family protein, at 1,454,290 to 1,455,300
_RS22710
ABZR87_RS22715: ABZR87_RS22715 - ABC transporter substrate-binding protein, at 1,455,418 to 1,456,398
_RS22715
Position (kb)
1454
1455
1456 Strain fitness (log2 ratio)
-2
-1
0
1 at 1453.369 kb on + strand at 1453.369 kb on + strand at 1453.370 kb on - strand at 1453.400 kb on + strand at 1453.400 kb on + strand at 1453.401 kb on - strand at 1453.401 kb on - strand at 1453.401 kb on - strand at 1453.401 kb on - strand at 1453.401 kb on - strand at 1453.401 kb on - strand at 1453.846 kb on + strand, within ABZR87_RS22705 at 1453.846 kb on + strand, within ABZR87_RS22705 at 1453.846 kb on + strand, within ABZR87_RS22705 at 1453.846 kb on + strand, within ABZR87_RS22705 at 1453.847 kb on - strand, within ABZR87_RS22705 at 1453.847 kb on - strand, within ABZR87_RS22705 at 1453.905 kb on + strand, within ABZR87_RS22705 at 1453.905 kb on + strand, within ABZR87_RS22705 at 1453.906 kb on - strand, within ABZR87_RS22705 at 1454.181 kb on + strand, within ABZR87_RS22705 at 1454.181 kb on + strand, within ABZR87_RS22705 at 1454.181 kb on + strand, within ABZR87_RS22705 at 1454.181 kb on + strand, within ABZR87_RS22705 at 1454.181 kb on + strand, within ABZR87_RS22705 at 1454.182 kb on - strand, within ABZR87_RS22705 at 1454.182 kb on - strand, within ABZR87_RS22705 at 1454.182 kb on - strand, within ABZR87_RS22705 at 1454.182 kb on - strand, within ABZR87_RS22705 at 1454.185 kb on + strand, within ABZR87_RS22705 at 1454.185 kb on + strand, within ABZR87_RS22705 at 1454.186 kb on - strand, within ABZR87_RS22705 at 1454.285 kb on + strand at 1454.285 kb on + strand at 1454.291 kb on + strand at 1454.292 kb on - strand at 1454.292 kb on - strand at 1454.292 kb on - strand at 1454.650 kb on + strand, within ABZR87_RS22710 at 1454.809 kb on - strand, within ABZR87_RS22710 at 1454.850 kb on - strand, within ABZR87_RS22710 at 1455.028 kb on - strand, within ABZR87_RS22710 at 1455.274 kb on + strand at 1455.292 kb on + strand at 1455.293 kb on - strand at 1455.419 kb on + strand at 1455.419 kb on + strand at 1455.419 kb on + strand at 1455.432 kb on - strand at 1455.530 kb on + strand, within ABZR87_RS22715 at 1455.780 kb on + strand, within ABZR87_RS22715 at 1455.815 kb on + strand, within ABZR87_RS22715 at 1455.815 kb on + strand, within ABZR87_RS22715 at 1455.815 kb on + strand, within ABZR87_RS22715 at 1455.816 kb on - strand, within ABZR87_RS22715 at 1455.816 kb on - strand, within ABZR87_RS22715 at 1455.816 kb on - strand, within ABZR87_RS22715 at 1455.824 kb on + strand, within ABZR87_RS22715 at 1455.824 kb on + strand, within ABZR87_RS22715 at 1455.825 kb on - strand, within ABZR87_RS22715 at 1455.911 kb on + strand, within ABZR87_RS22715 at 1455.911 kb on + strand, within ABZR87_RS22715 at 1455.912 kb on - strand, within ABZR87_RS22715 at 1455.912 kb on - strand, within ABZR87_RS22715 at 1455.912 kb on - strand, within ABZR87_RS22715 at 1456.181 kb on - strand, within ABZR87_RS22715
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 1,453,369 + +0.2 1,453,369 + -0.3 1,453,370 - +0.8 1,453,400 + +0.4 1,453,400 + -0.2 1,453,401 - +0.1 1,453,401 - -0.9 1,453,401 - +0.1 1,453,401 - -0.7 1,453,401 - -0.0 1,453,401 - +1.0 1,453,846 + ABZR87_RS22705 0.49 -0.5 1,453,846 + ABZR87_RS22705 0.49 -0.7 1,453,846 + ABZR87_RS22705 0.49 -0.6 1,453,846 + ABZR87_RS22705 0.49 -1.0 1,453,847 - ABZR87_RS22705 0.50 -0.1 1,453,847 - ABZR87_RS22705 0.50 +0.6 1,453,905 + ABZR87_RS22705 0.56 +0.1 1,453,905 + ABZR87_RS22705 0.56 -0.7 1,453,906 - ABZR87_RS22705 0.57 +0.0 1,454,181 + ABZR87_RS22705 0.89 -0.2 1,454,181 + ABZR87_RS22705 0.89 +0.3 1,454,181 + ABZR87_RS22705 0.89 -0.3 1,454,181 + ABZR87_RS22705 0.89 +0.4 1,454,181 + ABZR87_RS22705 0.89 -1.0 1,454,182 - ABZR87_RS22705 0.89 +0.5 1,454,182 - ABZR87_RS22705 0.89 +0.1 1,454,182 - ABZR87_RS22705 0.89 +0.4 1,454,182 - ABZR87_RS22705 0.89 -0.7 1,454,185 + ABZR87_RS22705 0.89 +1.0 1,454,185 + ABZR87_RS22705 0.89 +0.8 1,454,186 - ABZR87_RS22705 0.90 +0.5 1,454,285 + -0.5 1,454,285 + -1.8 1,454,291 + -0.2 1,454,292 - -1.3 1,454,292 - +0.1 1,454,292 - +0.7 1,454,650 + ABZR87_RS22710 0.36 -0.8 1,454,809 - ABZR87_RS22710 0.51 +1.0 1,454,850 - ABZR87_RS22710 0.55 +0.5 1,455,028 - ABZR87_RS22710 0.73 +0.9 1,455,274 + +0.4 1,455,292 + +1.6 1,455,293 - +1.7 1,455,419 + +0.8 1,455,419 + -0.5 1,455,419 + -0.0 1,455,432 - +1.7 1,455,530 + ABZR87_RS22715 0.11 +0.3 1,455,780 + ABZR87_RS22715 0.37 -0.2 1,455,815 + ABZR87_RS22715 0.40 +1.1 1,455,815 + ABZR87_RS22715 0.40 -0.9 1,455,815 + ABZR87_RS22715 0.40 +0.8 1,455,816 - ABZR87_RS22715 0.41 -0.2 1,455,816 - ABZR87_RS22715 0.41 +0.6 1,455,816 - ABZR87_RS22715 0.41 -1.0 1,455,824 + ABZR87_RS22715 0.41 +0.7 1,455,824 + ABZR87_RS22715 0.41 +0.1 1,455,825 - ABZR87_RS22715 0.41 -1.7 1,455,911 + ABZR87_RS22715 0.50 +0.1 1,455,911 + ABZR87_RS22715 0.50 +0.3 1,455,912 - ABZR87_RS22715 0.50 +0.5 1,455,912 - ABZR87_RS22715 0.50 -0.2 1,455,912 - ABZR87_RS22715 0.50 -0.3 1,456,181 - ABZR87_RS22715 0.78 +0.6
Or see this region's nucleotide sequence