Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11480 and ABZR87_RS11485 are separated by 170 nucleotides
ABZR87_RS11480: ABZR87_RS11480 - 3-hydroxybutyrate oligomer hydrolase family protein, at 2,431,883 to 2,434,060
_RS11480
ABZR87_RS11485: ABZR87_RS11485 - ATP-dependent chaperone ClpB, at 2,434,231 to 2,436,819
_RS11485
Position (kb)
2434
2435
2436
2437 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2433.263 kb on + strand, within ABZR87_RS11480 at 2433.263 kb on + strand, within ABZR87_RS11480 at 2433.263 kb on + strand, within ABZR87_RS11480 at 2433.264 kb on - strand, within ABZR87_RS11480 at 2433.264 kb on - strand, within ABZR87_RS11480 at 2433.704 kb on + strand, within ABZR87_RS11480 at 2433.752 kb on + strand, within ABZR87_RS11480 at 2433.752 kb on + strand, within ABZR87_RS11480 at 2433.752 kb on + strand, within ABZR87_RS11480 at 2433.753 kb on - strand, within ABZR87_RS11480 at 2433.753 kb on - strand, within ABZR87_RS11480 at 2433.753 kb on - strand, within ABZR87_RS11480 at 2433.753 kb on - strand, within ABZR87_RS11480 at 2433.754 kb on + strand, within ABZR87_RS11480 at 2433.810 kb on - strand, within ABZR87_RS11480 at 2433.810 kb on - strand, within ABZR87_RS11480 at 2433.839 kb on + strand, within ABZR87_RS11480 at 2433.839 kb on + strand, within ABZR87_RS11480 at 2433.840 kb on - strand, within ABZR87_RS11480 at 2433.866 kb on + strand at 2433.866 kb on + strand at 2433.866 kb on + strand at 2433.866 kb on + strand at 2433.866 kb on + strand at 2433.866 kb on + strand at 2433.867 kb on - strand at 2433.867 kb on - strand at 2433.867 kb on - strand at 2433.867 kb on - strand at 2433.867 kb on - strand at 2433.867 kb on - strand at 2434.190 kb on - strand at 2434.229 kb on + strand at 2434.230 kb on - strand at 2434.230 kb on - strand at 2434.312 kb on + strand at 2434.312 kb on + strand at 2434.312 kb on + strand at 2434.313 kb on - strand at 2434.313 kb on - strand at 2434.717 kb on + strand, within ABZR87_RS11485 at 2434.718 kb on - strand, within ABZR87_RS11485 at 2434.718 kb on - strand, within ABZR87_RS11485 at 2434.978 kb on + strand, within ABZR87_RS11485 at 2434.978 kb on + strand, within ABZR87_RS11485 at 2435.191 kb on + strand, within ABZR87_RS11485 at 2435.191 kb on + strand, within ABZR87_RS11485 at 2435.192 kb on - strand, within ABZR87_RS11485 at 2435.192 kb on - strand, within ABZR87_RS11485 at 2435.297 kb on - strand, within ABZR87_RS11485 at 2435.297 kb on - strand, within ABZR87_RS11485 at 2435.297 kb on - strand, within ABZR87_RS11485 at 2435.365 kb on + strand, within ABZR87_RS11485 at 2435.366 kb on - strand, within ABZR87_RS11485 at 2435.366 kb on - strand, within ABZR87_RS11485 at 2435.427 kb on + strand, within ABZR87_RS11485 at 2435.428 kb on - strand, within ABZR87_RS11485 at 2435.428 kb on - strand, within ABZR87_RS11485 at 2435.428 kb on - strand, within ABZR87_RS11485 at 2435.437 kb on + strand, within ABZR87_RS11485 at 2435.590 kb on + strand, within ABZR87_RS11485 at 2435.591 kb on - strand, within ABZR87_RS11485 at 2435.591 kb on - strand, within ABZR87_RS11485 at 2435.735 kb on - strand, within ABZR87_RS11485 at 2436.031 kb on + strand, within ABZR87_RS11485 at 2436.196 kb on + strand, within ABZR87_RS11485 at 2436.196 kb on + strand, within ABZR87_RS11485 at 2436.196 kb on + strand, within ABZR87_RS11485 at 2436.197 kb on - strand, within ABZR87_RS11485 at 2436.220 kb on + strand, within ABZR87_RS11485 at 2436.250 kb on + strand, within ABZR87_RS11485 at 2436.251 kb on - strand, within ABZR87_RS11485 at 2436.827 kb on + strand at 2436.827 kb on + strand at 2436.828 kb on - strand at 2436.838 kb on + strand at 2436.839 kb on - strand at 2437.242 kb on - strand at 2437.242 kb on - strand at 2437.242 kb on - strand at 2437.536 kb on + strand at 2437.536 kb on + strand at 2437.537 kb on - strand at 2437.537 kb on - strand at 2437.537 kb on - strand at 2437.537 kb on - strand at 2437.555 kb on + strand at 2437.555 kb on + strand at 2437.597 kb on + strand at 2437.597 kb on + strand at 2437.597 kb on + strand at 2437.598 kb on - strand at 2437.598 kb on - strand at 2437.598 kb on - strand at 2437.639 kb on + strand at 2437.639 kb on + strand at 2437.723 kb on + strand at 2437.724 kb on - strand at 2437.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 2,433,263 + ABZR87_RS11480 0.63 +0.7 2,433,263 + ABZR87_RS11480 0.63 -0.2 2,433,263 + ABZR87_RS11480 0.63 +0.5 2,433,264 - ABZR87_RS11480 0.63 -0.3 2,433,264 - ABZR87_RS11480 0.63 +0.0 2,433,704 + ABZR87_RS11480 0.84 +0.5 2,433,752 + ABZR87_RS11480 0.86 +0.1 2,433,752 + ABZR87_RS11480 0.86 -0.1 2,433,752 + ABZR87_RS11480 0.86 +0.3 2,433,753 - ABZR87_RS11480 0.86 -0.1 2,433,753 - ABZR87_RS11480 0.86 +0.6 2,433,753 - ABZR87_RS11480 0.86 +0.2 2,433,753 - ABZR87_RS11480 0.86 +0.4 2,433,754 + ABZR87_RS11480 0.86 +0.0 2,433,810 - ABZR87_RS11480 0.88 -0.7 2,433,810 - ABZR87_RS11480 0.88 +0.1 2,433,839 + ABZR87_RS11480 0.90 -0.2 2,433,839 + ABZR87_RS11480 0.90 +0.0 2,433,840 - ABZR87_RS11480 0.90 -0.4 2,433,866 + -1.0 2,433,866 + +0.7 2,433,866 + -0.5 2,433,866 + +0.2 2,433,866 + +0.6 2,433,866 + -2.4 2,433,867 - -0.0 2,433,867 - -0.1 2,433,867 - -0.0 2,433,867 - +0.4 2,433,867 - -0.2 2,433,867 - -0.7 2,434,190 - -0.3 2,434,229 + -0.2 2,434,230 - -1.0 2,434,230 - +0.5 2,434,312 + -0.2 2,434,312 + +0.6 2,434,312 + +0.4 2,434,313 - -0.4 2,434,313 - +0.4 2,434,717 + ABZR87_RS11485 0.19 +0.8 2,434,718 - ABZR87_RS11485 0.19 +1.0 2,434,718 - ABZR87_RS11485 0.19 -0.3 2,434,978 + ABZR87_RS11485 0.29 +0.5 2,434,978 + ABZR87_RS11485 0.29 +1.4 2,435,191 + ABZR87_RS11485 0.37 +1.2 2,435,191 + ABZR87_RS11485 0.37 +2.6 2,435,192 - ABZR87_RS11485 0.37 -0.1 2,435,192 - ABZR87_RS11485 0.37 -0.1 2,435,297 - ABZR87_RS11485 0.41 -0.6 2,435,297 - ABZR87_RS11485 0.41 -0.5 2,435,297 - ABZR87_RS11485 0.41 +0.2 2,435,365 + ABZR87_RS11485 0.44 +0.2 2,435,366 - ABZR87_RS11485 0.44 -1.0 2,435,366 - ABZR87_RS11485 0.44 +0.1 2,435,427 + ABZR87_RS11485 0.46 +0.5 2,435,428 - ABZR87_RS11485 0.46 -0.7 2,435,428 - ABZR87_RS11485 0.46 +0.5 2,435,428 - ABZR87_RS11485 0.46 +0.1 2,435,437 + ABZR87_RS11485 0.47 +0.8 2,435,590 + ABZR87_RS11485 0.52 +0.7 2,435,591 - ABZR87_RS11485 0.53 +0.5 2,435,591 - ABZR87_RS11485 0.53 +0.5 2,435,735 - ABZR87_RS11485 0.58 +0.4 2,436,031 + ABZR87_RS11485 0.70 +0.5 2,436,196 + ABZR87_RS11485 0.76 +0.4 2,436,196 + ABZR87_RS11485 0.76 -0.1 2,436,196 + ABZR87_RS11485 0.76 +0.0 2,436,197 - ABZR87_RS11485 0.76 +1.7 2,436,220 + ABZR87_RS11485 0.77 +0.1 2,436,250 + ABZR87_RS11485 0.78 +1.0 2,436,251 - ABZR87_RS11485 0.78 +0.6 2,436,827 + +0.3 2,436,827 + +1.4 2,436,828 - -2.2 2,436,838 + +0.2 2,436,839 - +0.6 2,437,242 - -1.3 2,437,242 - +0.5 2,437,242 - +1.2 2,437,536 + +0.6 2,437,536 + -1.7 2,437,537 - +0.4 2,437,537 - -1.0 2,437,537 - -0.2 2,437,537 - +0.0 2,437,555 + -1.2 2,437,555 + +0.2 2,437,597 + +0.6 2,437,597 + +0.2 2,437,597 + -0.2 2,437,598 - +0.1 2,437,598 - +0.7 2,437,598 - +0.1 2,437,639 + +0.8 2,437,639 + +0.3 2,437,723 + +0.6 2,437,724 - -0.1 2,437,724 - +0.1
Or see this region's nucleotide sequence