Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS09025 and ABZR87_RS09030 are separated by 4 nucleotides ABZR87_RS09030 and ABZR87_RS09035 are separated by 79 nucleotides
ABZR87_RS09025: ABZR87_RS09025 - MFS transporter, at 1,913,265 to 1,914,545
_RS09025
ABZR87_RS09030: ABZR87_RS09030 - NAD(P)-dependent oxidoreductase, at 1,914,550 to 1,915,524
_RS09030
ABZR87_RS09035: ABZR87_RS09035 - LacI family DNA-binding transcriptional regulator, at 1,915,604 to 1,916,668
_RS09035
Position (kb)
1914
1915
1916 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1913.654 kb on + strand, within ABZR87_RS09025 at 1913.682 kb on - strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.768 kb on + strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.769 kb on - strand, within ABZR87_RS09025 at 1913.932 kb on - strand, within ABZR87_RS09025 at 1913.979 kb on + strand, within ABZR87_RS09025 at 1913.979 kb on + strand, within ABZR87_RS09025 at 1913.979 kb on + strand, within ABZR87_RS09025 at 1913.980 kb on - strand, within ABZR87_RS09025 at 1913.980 kb on - strand, within ABZR87_RS09025 at 1914.003 kb on + strand, within ABZR87_RS09025 at 1914.003 kb on + strand, within ABZR87_RS09025 at 1914.004 kb on - strand, within ABZR87_RS09025 at 1914.090 kb on + strand, within ABZR87_RS09025 at 1914.090 kb on + strand, within ABZR87_RS09025 at 1914.091 kb on - strand, within ABZR87_RS09025 at 1914.091 kb on - strand, within ABZR87_RS09025 at 1914.240 kb on + strand, within ABZR87_RS09025 at 1914.240 kb on + strand, within ABZR87_RS09025 at 1914.240 kb on + strand, within ABZR87_RS09025 at 1914.240 kb on + strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.241 kb on - strand, within ABZR87_RS09025 at 1914.273 kb on + strand, within ABZR87_RS09025 at 1914.273 kb on + strand, within ABZR87_RS09025 at 1914.273 kb on + strand, within ABZR87_RS09025 at 1914.273 kb on + strand, within ABZR87_RS09025 at 1914.274 kb on - strand, within ABZR87_RS09025 at 1914.274 kb on - strand, within ABZR87_RS09025 at 1914.274 kb on - strand, within ABZR87_RS09025 at 1914.274 kb on - strand, within ABZR87_RS09025 at 1914.283 kb on - strand, within ABZR87_RS09025 at 1914.283 kb on - strand, within ABZR87_RS09025 at 1914.349 kb on + strand, within ABZR87_RS09025 at 1914.350 kb on - strand, within ABZR87_RS09025 at 1914.390 kb on + strand, within ABZR87_RS09025 at 1914.390 kb on + strand, within ABZR87_RS09025 at 1914.390 kb on + strand, within ABZR87_RS09025 at 1914.402 kb on + strand, within ABZR87_RS09025 at 1914.403 kb on - strand, within ABZR87_RS09025 at 1914.439 kb on - strand at 1914.439 kb on - strand at 1914.439 kb on - strand at 1914.572 kb on - strand at 1914.572 kb on - strand at 1914.572 kb on - strand at 1914.764 kb on - strand, within ABZR87_RS09030 at 1915.054 kb on + strand, within ABZR87_RS09030 at 1915.054 kb on + strand, within ABZR87_RS09030 at 1915.055 kb on - strand, within ABZR87_RS09030 at 1915.055 kb on - strand, within ABZR87_RS09030 at 1915.293 kb on + strand, within ABZR87_RS09030 at 1915.293 kb on + strand, within ABZR87_RS09030 at 1915.293 kb on + strand, within ABZR87_RS09030 at 1915.467 kb on + strand at 1915.467 kb on + strand at 1915.546 kb on - strand at 1915.694 kb on + strand at 1915.853 kb on + strand, within ABZR87_RS09035 at 1915.854 kb on - strand, within ABZR87_RS09035 at 1915.904 kb on + strand, within ABZR87_RS09035 at 1915.904 kb on + strand, within ABZR87_RS09035 at 1915.904 kb on + strand, within ABZR87_RS09035 at 1915.905 kb on - strand, within ABZR87_RS09035 at 1916.079 kb on + strand, within ABZR87_RS09035 at 1916.080 kb on - strand, within ABZR87_RS09035
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 1,913,654 + ABZR87_RS09025 0.30 -0.1 1,913,682 - ABZR87_RS09025 0.33 +1.1 1,913,768 + ABZR87_RS09025 0.39 -0.5 1,913,768 + ABZR87_RS09025 0.39 -0.1 1,913,768 + ABZR87_RS09025 0.39 -0.5 1,913,768 + ABZR87_RS09025 0.39 +0.3 1,913,768 + ABZR87_RS09025 0.39 +0.8 1,913,769 - ABZR87_RS09025 0.39 +0.3 1,913,769 - ABZR87_RS09025 0.39 +1.0 1,913,769 - ABZR87_RS09025 0.39 +1.5 1,913,769 - ABZR87_RS09025 0.39 -0.7 1,913,769 - ABZR87_RS09025 0.39 -0.7 1,913,769 - ABZR87_RS09025 0.39 -0.6 1,913,932 - ABZR87_RS09025 0.52 +0.0 1,913,979 + ABZR87_RS09025 0.56 -0.5 1,913,979 + ABZR87_RS09025 0.56 +0.0 1,913,979 + ABZR87_RS09025 0.56 -1.6 1,913,980 - ABZR87_RS09025 0.56 -0.2 1,913,980 - ABZR87_RS09025 0.56 -0.2 1,914,003 + ABZR87_RS09025 0.58 +0.2 1,914,003 + ABZR87_RS09025 0.58 +0.0 1,914,004 - ABZR87_RS09025 0.58 +0.8 1,914,090 + ABZR87_RS09025 0.64 -0.0 1,914,090 + ABZR87_RS09025 0.64 +0.1 1,914,091 - ABZR87_RS09025 0.64 -0.3 1,914,091 - ABZR87_RS09025 0.64 +0.4 1,914,240 + ABZR87_RS09025 0.76 +0.4 1,914,240 + ABZR87_RS09025 0.76 +0.3 1,914,240 + ABZR87_RS09025 0.76 -2.3 1,914,240 + ABZR87_RS09025 0.76 +0.4 1,914,241 - ABZR87_RS09025 0.76 +0.7 1,914,241 - ABZR87_RS09025 0.76 -1.3 1,914,241 - ABZR87_RS09025 0.76 +0.3 1,914,241 - ABZR87_RS09025 0.76 +0.1 1,914,241 - ABZR87_RS09025 0.76 -0.0 1,914,241 - ABZR87_RS09025 0.76 -1.0 1,914,241 - ABZR87_RS09025 0.76 -1.7 1,914,241 - ABZR87_RS09025 0.76 +0.9 1,914,273 + ABZR87_RS09025 0.79 +0.3 1,914,273 + ABZR87_RS09025 0.79 -0.2 1,914,273 + ABZR87_RS09025 0.79 +0.1 1,914,273 + ABZR87_RS09025 0.79 +0.5 1,914,274 - ABZR87_RS09025 0.79 +0.7 1,914,274 - ABZR87_RS09025 0.79 +0.7 1,914,274 - ABZR87_RS09025 0.79 -0.4 1,914,274 - ABZR87_RS09025 0.79 -0.9 1,914,283 - ABZR87_RS09025 0.79 -0.8 1,914,283 - ABZR87_RS09025 0.79 +0.3 1,914,349 + ABZR87_RS09025 0.85 +0.5 1,914,350 - ABZR87_RS09025 0.85 +0.2 1,914,390 + ABZR87_RS09025 0.88 -0.3 1,914,390 + ABZR87_RS09025 0.88 -0.2 1,914,390 + ABZR87_RS09025 0.88 +0.4 1,914,402 + ABZR87_RS09025 0.89 -1.1 1,914,403 - ABZR87_RS09025 0.89 -0.1 1,914,439 - -0.1 1,914,439 - +0.1 1,914,439 - +0.0 1,914,572 - +0.1 1,914,572 - -0.2 1,914,572 - +0.3 1,914,764 - ABZR87_RS09030 0.22 -0.1 1,915,054 + ABZR87_RS09030 0.52 -2.8 1,915,054 + ABZR87_RS09030 0.52 -0.4 1,915,055 - ABZR87_RS09030 0.52 -0.0 1,915,055 - ABZR87_RS09030 0.52 +0.0 1,915,293 + ABZR87_RS09030 0.76 +0.3 1,915,293 + ABZR87_RS09030 0.76 +0.0 1,915,293 + ABZR87_RS09030 0.76 -0.6 1,915,467 + -0.1 1,915,467 + +0.2 1,915,546 - -1.5 1,915,694 + -0.8 1,915,853 + ABZR87_RS09035 0.23 -2.5 1,915,854 - ABZR87_RS09035 0.23 -0.7 1,915,904 + ABZR87_RS09035 0.28 -0.1 1,915,904 + ABZR87_RS09035 0.28 -1.4 1,915,904 + ABZR87_RS09035 0.28 -1.4 1,915,905 - ABZR87_RS09035 0.28 -0.2 1,916,079 + ABZR87_RS09035 0.45 -1.9 1,916,080 - ABZR87_RS09035 0.45 -0.3
Or see this region's nucleotide sequence