Experiment: Lauric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS04890 and ABZR87_RS04895 are separated by 224 nucleotides ABZR87_RS04895 and ABZR87_RS04900 overlap by 4 nucleotides
ABZR87_RS04890: ABZR87_RS04890 - complex I NDUFA9 subunit family protein, at 1,026,150 to 1,027,154
_RS04890
ABZR87_RS04895: ABZR87_RS04895 - glutathione S-transferase family protein, at 1,027,379 to 1,028,080
_RS04895
ABZR87_RS04900: ABZR87_RS04900 - multifunctional CCA addition/repair protein, at 1,028,077 to 1,029,363
_RS04900
Position (kb)
1027
1028
1029 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1026.434 kb on - strand, within ABZR87_RS04890 at 1026.434 kb on - strand, within ABZR87_RS04890 at 1026.434 kb on - strand, within ABZR87_RS04890 at 1026.434 kb on - strand, within ABZR87_RS04890 at 1026.459 kb on + strand, within ABZR87_RS04890 at 1026.588 kb on + strand, within ABZR87_RS04890 at 1026.588 kb on + strand, within ABZR87_RS04890 at 1026.588 kb on + strand, within ABZR87_RS04890 at 1026.589 kb on - strand, within ABZR87_RS04890 at 1026.589 kb on - strand, within ABZR87_RS04890 at 1026.589 kb on - strand, within ABZR87_RS04890 at 1026.589 kb on - strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.768 kb on + strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.769 kb on - strand, within ABZR87_RS04890 at 1026.834 kb on + strand, within ABZR87_RS04890 at 1026.858 kb on + strand, within ABZR87_RS04890 at 1026.859 kb on - strand, within ABZR87_RS04890 at 1026.859 kb on - strand, within ABZR87_RS04890 at 1026.859 kb on - strand, within ABZR87_RS04890 at 1026.859 kb on - strand, within ABZR87_RS04890 at 1027.136 kb on + strand at 1027.136 kb on + strand at 1027.137 kb on - strand at 1027.248 kb on + strand at 1027.248 kb on + strand at 1027.248 kb on + strand at 1027.248 kb on + strand at 1027.249 kb on - strand at 1027.249 kb on - strand at 1027.249 kb on - strand at 1027.249 kb on - strand at 1027.249 kb on - strand at 1027.249 kb on - strand at 1027.292 kb on + strand at 1027.293 kb on - strand at 1027.303 kb on + strand at 1027.304 kb on - strand at 1027.304 kb on - strand at 1027.304 kb on - strand at 1027.406 kb on + strand at 1027.406 kb on + strand at 1027.406 kb on + strand at 1027.406 kb on + strand at 1027.406 kb on + strand at 1027.406 kb on + strand at 1027.406 kb on + strand at 1027.407 kb on - strand at 1027.407 kb on - strand at 1027.407 kb on - strand at 1027.407 kb on - strand at 1027.407 kb on - strand at 1027.517 kb on + strand, within ABZR87_RS04895 at 1027.518 kb on - strand, within ABZR87_RS04895 at 1027.518 kb on - strand, within ABZR87_RS04895 at 1027.868 kb on + strand, within ABZR87_RS04895 at 1027.868 kb on + strand, within ABZR87_RS04895 at 1027.868 kb on + strand, within ABZR87_RS04895 at 1027.898 kb on + strand, within ABZR87_RS04895 at 1027.898 kb on + strand, within ABZR87_RS04895 at 1027.898 kb on + strand, within ABZR87_RS04895 at 1027.898 kb on + strand, within ABZR87_RS04895 at 1027.931 kb on + strand, within ABZR87_RS04895 at 1027.932 kb on - strand, within ABZR87_RS04895 at 1027.932 kb on - strand, within ABZR87_RS04895 at 1027.932 kb on - strand, within ABZR87_RS04895 at 1027.932 kb on - strand, within ABZR87_RS04895 at 1027.932 kb on - strand, within ABZR87_RS04895 at 1027.932 kb on - strand, within ABZR87_RS04895 at 1027.940 kb on + strand, within ABZR87_RS04895 at 1027.940 kb on + strand, within ABZR87_RS04895 at 1027.940 kb on + strand, within ABZR87_RS04895 at 1027.940 kb on + strand, within ABZR87_RS04895 at 1027.940 kb on + strand, within ABZR87_RS04895 at 1027.940 kb on + strand, within ABZR87_RS04895 at 1027.941 kb on - strand, within ABZR87_RS04895 at 1027.941 kb on - strand, within ABZR87_RS04895 at 1027.941 kb on - strand, within ABZR87_RS04895 at 1027.941 kb on - strand, within ABZR87_RS04895 at 1028.140 kb on + strand at 1028.140 kb on + strand at 1028.140 kb on + strand at 1028.140 kb on + strand at 1028.140 kb on + strand at 1028.140 kb on + strand at 1028.835 kb on + strand, within ABZR87_RS04900 at 1028.835 kb on + strand, within ABZR87_RS04900 at 1028.835 kb on + strand, within ABZR87_RS04900
Per-strain Table
Position Strand Gene LocusTag Fraction Lauric (C) remove 1,026,434 - ABZR87_RS04890 0.28 +0.7 1,026,434 - ABZR87_RS04890 0.28 +0.5 1,026,434 - ABZR87_RS04890 0.28 -0.4 1,026,434 - ABZR87_RS04890 0.28 +1.0 1,026,459 + ABZR87_RS04890 0.31 +1.3 1,026,588 + ABZR87_RS04890 0.44 +0.9 1,026,588 + ABZR87_RS04890 0.44 +0.7 1,026,588 + ABZR87_RS04890 0.44 +0.7 1,026,589 - ABZR87_RS04890 0.44 +0.6 1,026,589 - ABZR87_RS04890 0.44 -0.2 1,026,589 - ABZR87_RS04890 0.44 -0.1 1,026,589 - ABZR87_RS04890 0.44 -0.5 1,026,768 + ABZR87_RS04890 0.61 +2.1 1,026,768 + ABZR87_RS04890 0.61 -0.3 1,026,768 + ABZR87_RS04890 0.61 +0.2 1,026,768 + ABZR87_RS04890 0.61 +0.9 1,026,768 + ABZR87_RS04890 0.61 +1.0 1,026,768 + ABZR87_RS04890 0.61 +0.3 1,026,768 + ABZR87_RS04890 0.61 +0.3 1,026,769 - ABZR87_RS04890 0.62 -0.3 1,026,769 - ABZR87_RS04890 0.62 -0.1 1,026,769 - ABZR87_RS04890 0.62 +0.9 1,026,769 - ABZR87_RS04890 0.62 -0.1 1,026,769 - ABZR87_RS04890 0.62 -0.1 1,026,769 - ABZR87_RS04890 0.62 -0.8 1,026,769 - ABZR87_RS04890 0.62 +1.0 1,026,769 - ABZR87_RS04890 0.62 -1.2 1,026,769 - ABZR87_RS04890 0.62 +0.5 1,026,769 - ABZR87_RS04890 0.62 +0.2 1,026,834 + ABZR87_RS04890 0.68 +1.1 1,026,858 + ABZR87_RS04890 0.70 +0.5 1,026,859 - ABZR87_RS04890 0.71 -0.6 1,026,859 - ABZR87_RS04890 0.71 +0.1 1,026,859 - ABZR87_RS04890 0.71 +0.6 1,026,859 - ABZR87_RS04890 0.71 -0.6 1,027,136 + -2.6 1,027,136 + +1.7 1,027,137 - -0.2 1,027,248 + +1.3 1,027,248 + +0.8 1,027,248 + +1.4 1,027,248 + -1.7 1,027,249 - -0.4 1,027,249 - -0.6 1,027,249 - +0.3 1,027,249 - +1.4 1,027,249 - +0.5 1,027,249 - +0.2 1,027,292 + +0.8 1,027,293 - -0.4 1,027,303 + +1.5 1,027,304 - +0.1 1,027,304 - -0.4 1,027,304 - -0.3 1,027,406 + -0.3 1,027,406 + -1.2 1,027,406 + +0.1 1,027,406 + -0.9 1,027,406 + +2.3 1,027,406 + -0.5 1,027,406 + +1.1 1,027,407 - -0.9 1,027,407 - -0.4 1,027,407 - -0.5 1,027,407 - -1.7 1,027,407 - -2.1 1,027,517 + ABZR87_RS04895 0.20 +0.6 1,027,518 - ABZR87_RS04895 0.20 +1.0 1,027,518 - ABZR87_RS04895 0.20 -0.5 1,027,868 + ABZR87_RS04895 0.70 -0.1 1,027,868 + ABZR87_RS04895 0.70 -0.4 1,027,868 + ABZR87_RS04895 0.70 +1.0 1,027,898 + ABZR87_RS04895 0.74 -2.0 1,027,898 + ABZR87_RS04895 0.74 +0.9 1,027,898 + ABZR87_RS04895 0.74 +0.2 1,027,898 + ABZR87_RS04895 0.74 -0.3 1,027,931 + ABZR87_RS04895 0.79 -1.2 1,027,932 - ABZR87_RS04895 0.79 -1.9 1,027,932 - ABZR87_RS04895 0.79 +0.3 1,027,932 - ABZR87_RS04895 0.79 -1.1 1,027,932 - ABZR87_RS04895 0.79 -0.8 1,027,932 - ABZR87_RS04895 0.79 -3.9 1,027,932 - ABZR87_RS04895 0.79 -0.5 1,027,940 + ABZR87_RS04895 0.80 -0.8 1,027,940 + ABZR87_RS04895 0.80 -1.7 1,027,940 + ABZR87_RS04895 0.80 -0.5 1,027,940 + ABZR87_RS04895 0.80 -0.5 1,027,940 + ABZR87_RS04895 0.80 +0.0 1,027,940 + ABZR87_RS04895 0.80 -1.1 1,027,941 - ABZR87_RS04895 0.80 -1.1 1,027,941 - ABZR87_RS04895 0.80 +0.1 1,027,941 - ABZR87_RS04895 0.80 -0.9 1,027,941 - ABZR87_RS04895 0.80 -1.3 1,028,140 + +1.3 1,028,140 + -0.4 1,028,140 + +0.8 1,028,140 + -0.2 1,028,140 + +0.5 1,028,140 + -0.0 1,028,835 + ABZR87_RS04900 0.59 -1.3 1,028,835 + ABZR87_RS04900 0.59 -1.9 1,028,835 + ABZR87_RS04900 0.59 -1.3
Or see this region's nucleotide sequence