Experiment: KB with Ginkgolide A 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4751 and Psyr_4752 are separated by 255 nucleotides Psyr_4752 and Psyr_4753 overlap by 4 nucleotides
Psyr_4751: Psyr_4751 - signal recognition particle-docking protein FtsY, at 5,626,435 to 5,627,952
_4751
Psyr_4752: Psyr_4752 - Insulinase-like:Peptidase M16, C-terminal, at 5,628,208 to 5,629,560
_4752
Psyr_4753: Psyr_4753 - Insulinase-like:Peptidase M16, C-terminal, at 5,629,557 to 5,631,047
_4753
Position (kb) 5628
5629
5630 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5628.067 kb on - strand at 5628.147 kb on - strand at 5628.147 kb on - strand at 5628.191 kb on - strand at 5628.203 kb on + strand at 5628.379 kb on + strand, within Psyr_4752 at 5628.379 kb on + strand, within Psyr_4752 at 5628.550 kb on + strand, within Psyr_4752 at 5628.550 kb on + strand, within Psyr_4752 at 5628.558 kb on - strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.021 kb on + strand, within Psyr_4752 at 5629.022 kb on - strand, within Psyr_4752 at 5629.022 kb on - strand, within Psyr_4752 at 5629.035 kb on - strand, within Psyr_4752 at 5629.112 kb on - strand, within Psyr_4752 at 5629.177 kb on + strand, within Psyr_4752 at 5629.360 kb on + strand, within Psyr_4752 at 5629.360 kb on + strand, within Psyr_4752 at 5629.360 kb on + strand, within Psyr_4752 at 5629.361 kb on - strand, within Psyr_4752 at 5629.361 kb on - strand, within Psyr_4752 at 5629.361 kb on - strand, within Psyr_4752 at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.501 kb on + strand at 5629.502 kb on - strand at 5629.502 kb on - strand at 5630.508 kb on + strand, within Psyr_4753 at 5630.509 kb on - strand, within Psyr_4753
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Ginkgolide A 10 mM remove 5,628,067 - +3.7 5,628,147 - -0.6 5,628,147 - -0.6 5,628,191 - -2.1 5,628,203 + -2.8 5,628,379 + Psyr_4752 0.13 +0.4 5,628,379 + Psyr_4752 0.13 +0.7 5,628,550 + Psyr_4752 0.25 -1.2 5,628,550 + Psyr_4752 0.25 -2.4 5,628,558 - Psyr_4752 0.26 -0.4 5,629,021 + Psyr_4752 0.60 -1.0 5,629,021 + Psyr_4752 0.60 -1.2 5,629,021 + Psyr_4752 0.60 +0.0 5,629,021 + Psyr_4752 0.60 -1.8 5,629,022 - Psyr_4752 0.60 +0.4 5,629,022 - Psyr_4752 0.60 +0.4 5,629,035 - Psyr_4752 0.61 +0.9 5,629,112 - Psyr_4752 0.67 -1.5 5,629,177 + Psyr_4752 0.72 -2.4 5,629,360 + Psyr_4752 0.85 -1.9 5,629,360 + Psyr_4752 0.85 +0.9 5,629,360 + Psyr_4752 0.85 -0.1 5,629,361 - Psyr_4752 0.85 -1.1 5,629,361 - Psyr_4752 0.85 -1.6 5,629,361 - Psyr_4752 0.85 -0.5 5,629,501 + -1.1 5,629,501 + +0.5 5,629,501 + +0.7 5,629,501 + -0.2 5,629,501 + -1.5 5,629,502 - -0.5 5,629,502 - -0.6 5,630,508 + Psyr_4753 0.64 +0.1 5,630,509 - Psyr_4753 0.64 +3.5
Or see this region's nucleotide sequence