Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4157

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
4,942,805	+		Psyr_4156	0.32	-0.4
4,942,805	+		Psyr_4156	0.32	-0.1
4,942,806	-		Psyr_4156	0.32	+1.0
4,942,817	-		Psyr_4156	0.32	+3.7
4,942,836	+		Psyr_4156	0.34	+0.9
4,942,836	+		Psyr_4156	0.34	+2.7
4,942,837	-		Psyr_4156	0.34	+0.1
4,943,154	-		Psyr_4156	0.56	+0.3
4,943,160	-		Psyr_4156	0.56	+0.7
4,943,405	-		Psyr_4156	0.73	+0.1
4,943,429	+		Psyr_4156	0.75	-1.9
4,943,429	+		Psyr_4156	0.75	-0.6
4,943,429	+		Psyr_4156	0.75	-0.3
4,943,429	+		Psyr_4156	0.75	-0.1
4,943,429	+		Psyr_4156	0.75	+0.1
4,943,429	+		Psyr_4156	0.75	-0.3
4,943,429	+		Psyr_4156	0.75	-0.9
4,943,430	-		Psyr_4156	0.75	-2.2
4,943,430	-		Psyr_4156	0.75	+1.1
4,943,430	-		Psyr_4156	0.75	-0.9
4,943,493	+		Psyr_4156	0.79	+0.7
4,943,494	-		Psyr_4156	0.79	-0.5
4,943,672	+				+0.0
4,943,672	+				+0.5
4,943,672	+				-1.7
4,943,673	-				-0.4
4,943,790	+				+0.1
4,943,790	+				+0.0
4,943,790	+				-0.6
4,943,790	+				+0.5
4,943,790	+				+0.5
4,943,790	+				+0.2
4,943,791	-				+0.1
4,943,791	-				-0.4
4,944,022	+		Psyr_4157	0.27	+0.7
4,944,022	+		Psyr_4157	0.27	+0.1
4,944,022	+		Psyr_4157	0.27	+2.0
4,944,022	+		Psyr_4157	0.27	+0.7
4,944,022	+		Psyr_4157	0.27	-0.2
4,944,023	-		Psyr_4157	0.27	-1.7
4,944,023	-		Psyr_4157	0.27	+0.7
4,944,023	-		Psyr_4157	0.27	+1.9
4,944,023	-		Psyr_4157	0.27	-0.7
4,944,142	+		Psyr_4157	0.41	+0.5
4,944,143	-		Psyr_4157	0.41	+0.5
4,944,143	-		Psyr_4157	0.41	+0.7
4,944,167	-		Psyr_4157	0.44	-1.3
4,944,232	+		Psyr_4157	0.52	-0.4
4,944,232	+		Psyr_4157	0.52	+0.5
4,944,232	+		Psyr_4157	0.52	+1.4
4,944,232	+		Psyr_4157	0.52	-0.5
4,944,232	+		Psyr_4157	0.52	+1.3
4,944,233	-		Psyr_4157	0.52	+0.6
4,944,233	-		Psyr_4157	0.52	+0.1
4,944,233	-		Psyr_4157	0.52	+0.2
4,944,233	-		Psyr_4157	0.52	+0.8
4,944,233	-		Psyr_4157	0.52	+2.1
4,944,233	-		Psyr_4157	0.52	+1.1
4,944,409	-		Psyr_4157	0.73	+0.0
4,944,673	+				+0.9
4,944,673	+				+0.5
4,944,674	-				+1.1
4,944,674	-				+0.0
4,944,674	-				+0.0
4,944,674	-				+1.5
4,944,674	-				-0.9
4,944,754	+				+2.7
4,944,754	+				-2.9
4,944,754	+				-2.3
4,944,754	+				+1.1
4,944,754	+				-0.4
4,944,755	-				-2.9
4,944,985	+				-0.7
4,944,985	+				+2.1
4,944,985	+				+1.1
4,944,985	+				-0.7
4,944,985	+				-2.2
4,944,985	+				+0.6
4,944,985	+				-1.7
4,944,986	-				-0.7
4,944,986	-				-2.3
4,944,986	-				-1.9
4,944,986	-				-1.1
4,944,986	-				-2.9
4,945,027	+				+1.1
4,945,028	-				-1.6
4,945,048	-				-2.9
4,945,383	-		Psyr_4158	0.18	-3.7
4,945,594	+		Psyr_4158	0.24	-0.9
4,945,594	+		Psyr_4158	0.24	-2.0